BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0557.0076.p (249 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KGK5.1 B3KGK5_9BACI 3-oxoacyl-(Acyl-carrier-protein) reductase 349 1e-94 B7GGF1.1 B7GGF1_ANOFW 3-oxoacyl-[acyl-carrier-protein] protein r... 328 4e-88 C5D8T4.1 C5D8T4_9BACI 3-oxoacyl-(Acyl-carrier-protein) reductase 323 1e-86 C3J036.1 C3J036_9BACI 3-oxoacyl-(Acyl-carrier-protein) reductase 321 3e-86 B7Y8P9.1 B7Y8P9_9BACI 3-oxoacyl-(Acyl-carrier-protein) reductase 321 3e-86 >B3KGK5.1 B3KGK5_9BACI 3-oxoacyl-(Acyl-carrier-protein) reductase Length = 249 Score = 349 bits (896), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 171/249 (68%), Positives = 201/249 (80%) Query: 1 MFSALKGQTALVTGGSRGIGRSIALQLAEHGVKVAVNYSGNEAAAQETVARIIELGSEAI 60 M ALKGQTALVTG SRGIGRSIAL LA+ G VAVNY+G+EAAA E V I G AI Sbjct: 1 MSEALKGQTALVTGASRGIGRSIALALADLGANVAVNYAGSEAAATEVVEAIRAKGVSAI 60 Query: 61 AIRGDVGNSQQAESMVKEVIDTWGKIDILVNNAGITRDNLIMRMKEEEFDQVIETNLKGV 120 A++ +VG +++A++MVK+V++T+G+IDILVNNAGITRDNLIMRMKEEEFDQVIETNLKGV Sbjct: 61 AVKSNVGRTEEADAMVKQVLETFGRIDILVNNAGITRDNLIMRMKEEEFDQVIETNLKGV 120 Query: 121 FNCLKSATRPMMKQRYGRXXXXXXXXXXXXXAGQLNYSAAKAGIIGMTKSAARELSSRGI 180 FNCLK+ TRPMMKQRYGR GQ NY AAKAG+IG+TKSAAREL+SRGI Sbjct: 121 FNCLKAVTRPMMKQRYGRIINISSVVGALGNPGQANYVAAKAGVIGLTKSAARELASRGI 180 Query: 181 TVNCIAPGFIDTEMTHQLSDEVRSEYVKGIPLARLGRPEDIAMTVVFLASEGAAYMTGQT 240 TVN +APGFIDT+MT +L +++R + GIPLARLG+PE+IA V FLAS A+YMTGQ Sbjct: 181 TVNAVAPGFIDTDMTRELPEDMREGLLGGIPLARLGQPEEIAGVVTFLASSSASYMTGQV 240 Query: 241 LHVDGGMYM 249 LHVDGGMYM Sbjct: 241 LHVDGGMYM 249 >B7GGF1.1 B7GGF1_ANOFW 3-oxoacyl-[acyl-carrier-protein] protein reductase Length = 245 Score = 328 bits (840), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 156/245 (63%), Positives = 190/245 (77%) Query: 5 LKGQTALVTGGSRGIGRSIALQLAEHGVKVAVNYSGNEAAAQETVARIIELGSEAIAIRG 64 ++G+ A+VTG SRGIGR IAL LA G KVAVNY+G+EA A E VA+I+E G EA A++ Sbjct: 1 MEGKVAIVTGASRGIGREIALHLARLGAKVAVNYAGSEAKANEVVAQIVEHGGEAFAVQA 60 Query: 65 DVGNSQQAESMVKEVIDTWGKIDILVNNAGITRDNLIMRMKEEEFDQVIETNLKGVFNCL 124 DV NS+ + MVKEV++ WG++DILVNNAGITRDNL+MRMKEEE+D VI TNLKGVF C Sbjct: 61 DVANSEAVDHMVKEVLERWGRVDILVNNAGITRDNLLMRMKEEEWDAVINTNLKGVFLCT 120 Query: 125 KSATRPMMKQRYGRXXXXXXXXXXXXXAGQLNYSAAKAGIIGMTKSAARELSSRGITVNC 184 K+ TRPMMKQRYGR GQ NY AAKAG+IG+TK+AA+EL+SR ITVN Sbjct: 121 KAVTRPMMKQRYGRIVNVASIVGVSGNPGQANYVAAKAGVIGLTKTAAKELASRNITVNA 180 Query: 185 IAPGFIDTEMTHQLSDEVRSEYVKGIPLARLGRPEDIAMTVVFLASEGAAYMTGQTLHVD 244 +APGFI T+MT QLS++VR ++ IPLAR G PEDIA V FL S+GA+Y+TGQT+HVD Sbjct: 181 VAPGFITTDMTDQLSEDVRQAMLQQIPLARFGNPEDIAHVVAFLVSDGASYITGQTIHVD 240 Query: 245 GGMYM 249 GGM M Sbjct: 241 GGMVM 245 >C5D8T4.1 C5D8T4_9BACI 3-oxoacyl-(Acyl-carrier-protein) reductase Length = 246 Score = 323 bits (827), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 155/245 (63%), Positives = 188/245 (76%) Query: 5 LKGQTALVTGGSRGIGRSIALQLAEHGVKVAVNYSGNEAAAQETVARIIELGSEAIAIRG 64 L+G+ ALVTG SRGIGR+IAL+LA G KVAVNY+GNEA A E V I +G EA AI+ Sbjct: 2 LQGKVALVTGASRGIGRAIALELARQGAKVAVNYAGNEAKANEVVEEIKNMGGEAFAIQA 61 Query: 65 DVGNSQQAESMVKEVIDTWGKIDILVNNAGITRDNLIMRMKEEEFDQVIETNLKGVFNCL 124 DV N++ + MVK V++ + +IDILVNNAGITRDNL+MRMKEEE+D V+ NLKGVFNC Sbjct: 62 DVSNAEAVDQMVKAVLERFERIDILVNNAGITRDNLLMRMKEEEWDDVMNINLKGVFNCT 121 Query: 125 KSATRPMMKQRYGRXXXXXXXXXXXXXAGQLNYSAAKAGIIGMTKSAARELSSRGITVNC 184 K+ TRPMMKQRYGR GQ NY AAKAG+IG+TK+AAREL+SR ITVN Sbjct: 122 KAVTRPMMKQRYGRIVNIASIVGVSGNPGQANYVAAKAGVIGLTKTAARELASRNITVNA 181 Query: 185 IAPGFIDTEMTHQLSDEVRSEYVKGIPLARLGRPEDIAMTVVFLASEGAAYMTGQTLHVD 244 +APGFI T+MT +LS+E+++E +K IPLAR G PED+A V FL S+ A+YMTGQTLHVD Sbjct: 182 VAPGFITTDMTDRLSEELKAEMLKQIPLARFGEPEDVAKVVSFLVSDAASYMTGQTLHVD 241 Query: 245 GGMYM 249 GGM M Sbjct: 242 GGMVM 246 >C3J036.1 C3J036_9BACI 3-oxoacyl-(Acyl-carrier-protein) reductase Length = 247 Score = 321 bits (823), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 156/245 (63%), Positives = 187/245 (76%) Query: 5 LKGQTALVTGGSRGIGRSIALQLAEHGVKVAVNYSGNEAAAQETVARIIELGSEAIAIRG 64 L+G+ ALVTG SRGIGR++AL+LA G VAVNY+G+EA A E V I LG EAIA++ Sbjct: 2 LEGKIALVTGASRGIGRAVALELARQGANVAVNYAGSEAKANEVVEAIRSLGREAIAVQA 61 Query: 65 DVGNSQQAESMVKEVIDTWGKIDILVNNAGITRDNLIMRMKEEEFDQVIETNLKGVFNCL 124 DV ++ E MVK ID +G++DILVNNAGITRDNL+MRMKEEE+D VI TNLKGVF C Sbjct: 62 DVARAEDVERMVKTTIDHFGRLDILVNNAGITRDNLLMRMKEEEWDAVINTNLKGVFLCT 121 Query: 125 KSATRPMMKQRYGRXXXXXXXXXXXXXAGQLNYSAAKAGIIGMTKSAARELSSRGITVNC 184 K+ATRPMMKQRYGR GQ NY AAKAG+IG+TK+AAREL+SR ITVN Sbjct: 122 KAATRPMMKQRYGRIVNIASVVGVIGNPGQANYVAAKAGVIGLTKTAARELASRNITVNA 181 Query: 185 IAPGFIDTEMTHQLSDEVRSEYVKGIPLARLGRPEDIAMTVVFLASEGAAYMTGQTLHVD 244 +APGFI T+MT LS E+++E +K IPLAR G P+D+A V FLAS+ A+YMTGQTLHVD Sbjct: 182 VAPGFITTDMTEALSPELKAEMLKQIPLARFGEPDDVARVVAFLASDAASYMTGQTLHVD 241 Query: 245 GGMYM 249 GGM M Sbjct: 242 GGMVM 246 >B7Y8P9.1 B7Y8P9_9BACI 3-oxoacyl-(Acyl-carrier-protein) reductase Length = 247 Score = 321 bits (823), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 156/245 (63%), Positives = 187/245 (76%) Query: 5 LKGQTALVTGGSRGIGRSIALQLAEHGVKVAVNYSGNEAAAQETVARIIELGSEAIAIRG 64 L+G+ ALVTG SRGIGR++AL+LA G VAVNY+G+EA A E V I LG EAIA++ Sbjct: 2 LEGKIALVTGASRGIGRAVALELARQGANVAVNYAGSEAKANEVVEAIRSLGREAIAVQA 61 Query: 65 DVGNSQQAESMVKEVIDTWGKIDILVNNAGITRDNLIMRMKEEEFDQVIETNLKGVFNCL 124 DV ++ E MVK ID +G++DILVNNAGITRDNL+MRMKEEE+D VI TNLKGVF C Sbjct: 62 DVARAEDVERMVKTTIDHFGRLDILVNNAGITRDNLLMRMKEEEWDAVINTNLKGVFLCT 121 Query: 125 KSATRPMMKQRYGRXXXXXXXXXXXXXAGQLNYSAAKAGIIGMTKSAARELSSRGITVNC 184 K+ATRPMMKQRYGR GQ NY AAKAG+IG+TK+AAREL+SR ITVN Sbjct: 122 KAATRPMMKQRYGRIVNIASVVGVIGNPGQANYVAAKAGVIGLTKTAARELASRNITVNA 181 Query: 185 IAPGFIDTEMTHQLSDEVRSEYVKGIPLARLGRPEDIAMTVVFLASEGAAYMTGQTLHVD 244 +APGFI T+MT LS E+++E +K IPLAR G P+D+A V FLAS+ A+YMTGQTLHVD Sbjct: 182 VAPGFITTDMTEALSPELKAEMLKQIPLARFGEPDDVARVVAFLASDAASYMTGQTLHVD 241 Query: 245 GGMYM 249 GGM M Sbjct: 242 GGMVM 246 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.132 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,221,349,365 Number of extensions: 42893308 Number of successful extensions: 267537 Number of sequences better than 1.0e-05: 30603 Number of HSP's gapped: 210545 Number of HSP's successfully gapped: 30776 Length of query: 249 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 117 Effective length of database: 1,817,122,223 Effective search space: 212603300091 Effective search space used: 212603300091 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 129 (54.3 bits)