BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0557.0074.p (334 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KGK7.1 B3KGK7_9BACI 3-oxoacyl-(Acyl-carrier-protein) synthase ... 561 e-158 B1DJM0.1 B1DJM0_9BACL 3-oxoacyl-(Acyl-carrier-protein) synthase ... 475 e-132 C0ZFP5.1 C0ZFP5_BREBN 3-oxoacyl-[acyl-carrier-protein] synthase ... 452 e-125 C0WCW3.1 C0WCW3_9FIRM 3-oxoacyl-(Acyl-carrier-protein) synthase III 427 e-118 A1HN89.1 A1HN89_9FIRM 3-oxoacyl-(Acyl-carrier-protein) synthase ... 424 e-117 >B3KGK7.1 B3KGK7_9BACI 3-oxoacyl-(Acyl-carrier-protein) synthase III EC=2.3.1.41 Length = 329 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 267/328 (81%), Positives = 300/328 (91%) Query: 7 QQLRPVGIIGTGKYVPEQILTNSDLEKMVETNDEWIVSRTGIRERHIAAPHEATSDLAYE 66 LRPVGIIGTGKYVPE+IL+NSDLEKMV+T+DEWIVS TGIRERHIAAP+EATSDLAY Sbjct: 2 NNLRPVGIIGTGKYVPEKILSNSDLEKMVDTSDEWIVSMTGIRERHIAAPNEATSDLAYH 61 Query: 67 AALKALDSAGMKAEDLDLIIVATVTPDSTVPSTACILQDKLGAKGAAAFDLSAACSGFVY 126 AA+ AL SAGM+AEDL+LIIVAT+TPD PSTAC+LQD+LGAK AAAFDLSAACSGFVY Sbjct: 62 AAVNALKSAGMQAEDLELIIVATITPDMFFPSTACLLQDRLGAKKAAAFDLSAACSGFVY 121 Query: 127 SLATATGFIQNGMYNNALVIGADTLSRITDYTDRNTCVLFGDGAGAVIIGEVPEGRGFQS 186 LATAT F++ GMYNNALVIG D LSRITDYTDRNTCVLFGDGAGA I+GEVPEGRGFQ+ Sbjct: 122 GLATATNFVKTGMYNNALVIGVDCLSRITDYTDRNTCVLFGDGAGAAIVGEVPEGRGFQA 181 Query: 187 FDLGAEGSGGSLLNIEAGGSRLPASHQTIEDKKHFLYMNGREVFKFAVRVMGTATERVLT 246 FDLGAEG+GG+ L+IEAGGSRLPAS +TI KH++YMNGREVFKFAVRVMGTATE VL+ Sbjct: 182 FDLGAEGAGGAHLHIEAGGSRLPASAETINTNKHYIYMNGREVFKFAVRVMGTATEAVLS 241 Query: 247 KAGLGKENIDLFIPHQANIRIIQSAMQRLDLPPEKCVINVDKYANTSAASIPLALVEAAE 306 KAG+ K++IDLF+PHQANIRII+SAM+RL+LP EK VINVDKYANTSAAS+PLALVEA E Sbjct: 242 KAGIDKKDIDLFVPHQANIRIIKSAMERLELPEEKVVINVDKYANTSAASVPLALVEAQE 301 Query: 307 EGRIKEGDTLLMVGFGGGLTWGASVLIW 334 GR+KEGD +LMVGFGGGLTWG+SVLIW Sbjct: 302 SGRLKEGDKVLMVGFGGGLTWGSSVLIW 329 >B1DJM0.1 B1DJM0_9BACL 3-oxoacyl-(Acyl-carrier-protein) synthase III EC=2.3.1.41 Length = 328 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 223/327 (68%), Positives = 282/327 (86%) Query: 8 QLRPVGIIGTGKYVPEQILTNSDLEKMVETNDEWIVSRTGIRERHIAAPHEATSDLAYEA 67 L PVGIIGTGKYVP++IL+N +LE+MVETNDEWIV+RTGIRER +AA +ATSDLAY+A Sbjct: 2 NLHPVGIIGTGKYVPDRILSNQELEQMVETNDEWIVTRTGIRERRLAAAEQATSDLAYQA 61 Query: 68 ALKALDSAGMKAEDLDLIIVATVTPDSTVPSTACILQDKLGAKGAAAFDLSAACSGFVYS 127 +LKA+++AG+ ED+DLIIV+T+TPD+ PSTAC+LQ+KLGAK AAAFDLSAACSGF+Y Sbjct: 62 SLKAIEAAGITIEDIDLIIVSTITPDTFFPSTACLLQEKLGAKRAAAFDLSAACSGFIYG 121 Query: 128 LATATGFIQNGMYNNALVIGADTLSRITDYTDRNTCVLFGDGAGAVIIGEVPEGRGFQSF 187 LATA+ I GMY + LV+GA+TLSRITDYTDRNTC+LFGDGAGAV++G+V EGRGF+SF Sbjct: 122 LATASNMIATGMYKHVLVVGAETLSRITDYTDRNTCILFGDGAGAVVLGQVEEGRGFKSF 181 Query: 188 DLGAEGSGGSLLNIEAGGSRLPASHQTIEDKKHFLYMNGREVFKFAVRVMGTATERVLTK 247 +LGA+G GG LL + GGSR+P++ +++E K+H+++M G EVFKFAVR+MG A E L K Sbjct: 182 ELGADGGGGDLLKVSGGGSRMPSTAESVESKQHYIHMAGNEVFKFAVRIMGNAAEEALRK 241 Query: 248 AGLGKENIDLFIPHQANIRIIQSAMQRLDLPPEKCVINVDKYANTSAASIPLALVEAAEE 307 AG+ KE+I+L +PHQAN+RIIQSA+ RL+L EKC+IN+DKY N SAASIP+AL EA E+ Sbjct: 242 AGMNKEDINLLVPHQANVRIIQSALNRLNLSEEKCMINLDKYGNMSAASIPVALAEAVEQ 301 Query: 308 GRIKEGDTLLMVGFGGGLTWGASVLIW 334 G++ +GD L+ VGFGGGLTWGASVLIW Sbjct: 302 GKVNDGDCLVFVGFGGGLTWGASVLIW 328 >C0ZFP5.1 C0ZFP5_BREBN 3-oxoacyl-[acyl-carrier-protein] synthase III EC=2.3.1.180 Length = 338 Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust. Identities = 220/325 (67%), Positives = 267/325 (82%) Query: 10 RPVGIIGTGKYVPEQILTNSDLEKMVETNDEWIVSRTGIRERHIAAPHEATSDLAYEAAL 69 R VGI+ TG Y PE++LTN DLEKMVET+DEWIVSRTGIRER I++P +A+SDLAYEAA Sbjct: 5 RSVGILSTGSYTPERVLTNFDLEKMVETSDEWIVSRTGIRERRISSPEQASSDLAYEAAK 64 Query: 70 KALDSAGMKAEDLDLIIVATVTPDSTVPSTACILQDKLGAKGAAAFDLSAACSGFVYSLA 129 AL+ A + AE LD+IIVATVTPD + PSTAC+LQ+KLGA AAA DLSAAC+GF+Y + Sbjct: 65 AALEKANISAEQLDMIIVATVTPDMSFPSTACLLQEKLGATRAAAMDLSAACTGFLYGIT 124 Query: 130 TATGFIQNGMYNNALVIGADTLSRITDYTDRNTCVLFGDGAGAVIIGEVPEGRGFQSFDL 189 TAT FIQNG+Y LV+G +TLS+IT+Y DRNTCVLFGDGAGA +IGEV EG GFQSF+L Sbjct: 125 TATQFIQNGLYKKVLVVGVETLSKITNYKDRNTCVLFGDGAGAAVIGEVTEGYGFQSFEL 184 Query: 190 GAEGSGGSLLNIEAGGSRLPASHQTIEDKKHFLYMNGREVFKFAVRVMGTATERVLTKAG 249 GA+GSGGSLL + AGGSR PAS +++E H+LYM G EVFKFAVRVM +ATE VL+KAG Sbjct: 185 GADGSGGSLLCMPAGGSRTPASVESVEQGLHYLYMAGGEVFKFAVRVMNSATEAVLSKAG 244 Query: 250 LGKENIDLFIPHQANIRIIQSAMQRLDLPPEKCVINVDKYANTSAASIPLALVEAAEEGR 309 + K+ IDL +PHQAN RII SA+QR L +K IN+D+Y N S+ASIP+AL EA + GR Sbjct: 245 VSKDEIDLLVPHQANKRIIDSAVQRFGLSEDKVAINLDRYGNMSSASIPVALDEAVKAGR 304 Query: 310 IKEGDTLLMVGFGGGLTWGASVLIW 334 +KEGD L++VGFGGGLTWGA++L W Sbjct: 305 VKEGDNLILVGFGGGLTWGATLLKW 329 >C0WCW3.1 C0WCW3_9FIRM 3-oxoacyl-(Acyl-carrier-protein) synthase III Length = 336 Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust. Identities = 196/323 (60%), Positives = 257/323 (79%) Query: 12 VGIIGTGKYVPEQILTNSDLEKMVETNDEWIVSRTGIRERHIAAPHEATSDLAYEAALKA 71 VG +G G YVPE+I+TN DLEK+V+T++EWIV RTGIR+RHIAAP +ATSDLA+ AA +A Sbjct: 6 VGFLGMGSYVPEKIMTNYDLEKLVDTSNEWIVERTGIRQRHIAAPEQATSDLAFIAAQRA 65 Query: 72 LDSAGMKAEDLDLIIVATVTPDSTVPSTACILQDKLGAKGAAAFDLSAACSGFVYSLATA 131 LD A +KAEDLDLI+VA+ +PD PS AC+LQD+LGA AAAFDL A C+GF Y+ Sbjct: 66 LDDANLKAEDLDLIVVASESPDMKFPSVACMLQDRLGASHAAAFDLGAGCTGFAYACGIV 125 Query: 132 TGFIQNGMYNNALVIGADTLSRITDYTDRNTCVLFGDGAGAVIIGEVPEGRGFQSFDLGA 191 + I +G+Y + LV+GA+TLSRI D+TDRNTC+LFGDGAGA I+G V +G G S DLGA Sbjct: 126 SQTIASGLYKHVLVVGAETLSRILDFTDRNTCILFGDGAGAAILGPVEDGYGILSVDLGA 185 Query: 192 EGSGGSLLNIEAGGSRLPASHQTIEDKKHFLYMNGREVFKFAVRVMGTATERVLTKAGLG 251 +GSGG LN+ GGSR PASH+T++ +HF++MNG+EVFKFAVRV+G + + L K G+ Sbjct: 186 DGSGGKYLNMPGGGSRHPASHETVDHHEHFIHMNGKEVFKFAVRVLGRSVMKALDKIGMT 245 Query: 252 KENIDLFIPHQANIRIIQSAMQRLDLPPEKCVINVDKYANTSAASIPLALVEAAEEGRIK 311 K +IDL +PHQAN+RII SA +RLDLP K ++NVD+YANTSAASIP+AL +A ++GR+K Sbjct: 246 KNDIDLLVPHQANVRIIDSAAKRLDLPLNKVMVNVDQYANTSAASIPIALCDARDQGRLK 305 Query: 312 EGDTLLMVGFGGGLTWGASVLIW 334 + +++VGFG GLT+G+ V+ W Sbjct: 306 RDEIVVLVGFGAGLTYGSLVIKW 328 >A1HN89.1 A1HN89_9FIRM 3-oxoacyl-(Acyl-carrier-protein) synthase III EC=2.3.1.41 Length = 338 Score = 424 bits (1090), Expect = e-117, Method: Compositional matrix adjust. Identities = 206/330 (62%), Positives = 248/330 (75%) Query: 5 MKQQLRPVGIIGTGKYVPEQILTNSDLEKMVETNDEWIVSRTGIRERHIAAPHEATSDLA 64 MK VGI+G G YVPE++LTN DLEKMV+T+DEWIV RTGIRER IA P ATSDLA Sbjct: 1 MKANDIGVGILGLGCYVPEKVLTNHDLEKMVDTSDEWIVERTGIRERRIADPDVATSDLA 60 Query: 65 YEAALKALDSAGMKAEDLDLIIVATVTPDSTVPSTACILQDKLGAKGAAAFDLSAACSGF 124 AA +AL +AG+ A++LDLIIVAT TPD PS AC++QD L A AAAFDL A CSGF Sbjct: 61 TRAAERALSNAGISADELDLIIVATATPDMFFPSVACLVQDNLKATRAAAFDLVAGCSGF 120 Query: 125 VYSLATATGFIQNGMYNNALVIGADTLSRITDYTDRNTCVLFGDGAGAVIIGEVPEGRGF 184 VY L FI+ G+Y LVIGA+TLS+I D+TDRNTCVLFGDGAGA ++ E G G Sbjct: 121 VYGLTVGAQFIKTGLYKKVLVIGAETLSKILDWTDRNTCVLFGDGAGAAVLSETEPGYGL 180 Query: 185 QSFDLGAEGSGGSLLNIEAGGSRLPASHQTIEDKKHFLYMNGREVFKFAVRVMGTATERV 244 F LGA+GSGG LL + AGGSRLP S +T+ + HF++MNG EVFKFAVRVMG A + Sbjct: 181 IGFHLGADGSGGDLLKLPAGGSRLPPSVETVTQRLHFVHMNGNEVFKFAVRVMGEAAVKA 240 Query: 245 LTKAGLGKENIDLFIPHQANIRIIQSAMQRLDLPPEKCVINVDKYANTSAASIPLALVEA 304 L AGLG +++D IPHQANIRIIQSA +RL LP +K ++NVDKY NTSAASIP+AL EA Sbjct: 241 LENAGLGHQDVDCLIPHQANIRIIQSAAKRLKLPMDKVIVNVDKYGNTSAASIPIALEEA 300 Query: 305 AEEGRIKEGDTLLMVGFGGGLTWGASVLIW 334 GR+K+GD +++VGFG GLTW + V+ W Sbjct: 301 VRNGRVKKGDVVVLVGFGAGLTWASCVIKW 330 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.134 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,968,809,410 Number of extensions: 82809834 Number of successful extensions: 245227 Number of sequences better than 1.0e-05: 2481 Number of HSP's gapped: 240243 Number of HSP's successfully gapped: 2491 Length of query: 334 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 198 Effective length of database: 1,779,438,163 Effective search space: 352328756274 Effective search space used: 352328756274 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 131 (55.1 bits)