BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0557.0070.p (332 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KGL2.1 B3KGL2_9BACI Putative uncharacterized protein 331 7e-89 B1DJM5.1 B1DJM5_9BACL Putative uncharacterized protein 264 7e-69 B8I2X9.1 B8I2X9_CLOCE Putative uncharacterized protein 218 8e-55 A8MHA3.1 Y1446_ALKOO UPF0348 protein Clos_1446 210 2e-52 B6FN51.1 B6FN51_9CLOT Putative uncharacterized protein 203 2e-50 >B3KGL2.1 B3KGL2_9BACI Putative uncharacterized protein Length = 413 Score = 331 bits (848), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 181/334 (54%), Positives = 219/334 (65%), Gaps = 13/334 (3%) Query: 1 LSGADRSIVVMSGPFTQRGEPAAVSKQARTEMALHMGADVVIELPVAYAVQPAEWFAFGA 60 +SGAD + VMSGPF QRGEPA SK+AR EMAL MG D+ +ELPV YAVQPAEWFAFGA Sbjct: 27 VSGADAVVAVMSGPFLQRGEPAIASKRARAEMALAMGVDLCLELPVTYAVQPAEWFAFGA 86 Query: 61 VALLEATGVVDSLCFGSEAGTLSALQPMAEFLADESSALQGEIRRRMALGXXXXXXXXXX 120 VA+LEATGVVD L FGSE+GTL + P++ LA+ES L+ EI +R+ G Sbjct: 87 VAILEATGVVDCLSFGSESGTLEQILPLSRSLANESGELRSEIEKRLREGMNFPSAYGAA 146 Query: 121 XXXXXXXXXXXXXRRPGAAG-----LLRQPNNSLGLHYLIALRRLGSKIRPLTAPRTGAG 175 P A LL QPNNSLGLHYLIAL+RLGS+I P T PR A Sbjct: 147 AAVLFGESG------PATATAELQELLTQPNNSLGLHYLIALQRLGSRITPYTIPRVSAH 200 Query: 176 FHDPLQSGSPIASATAIRRLLSEGGSPAA--YMPEYSMSVLEREHAAGRGPLNLESFRIP 233 +HDPL S IASATAIR ++ G AA YMPE++ ++ERE +G P++ E FR P Sbjct: 201 YHDPLPGTSSIASATAIRNMILSQGLEAARPYMPEFTYDIMEREIKSGLAPVHWEQFRQP 260 Query: 234 LRHLLATRTAAELHGLQDMNEGLENRLLRVLPALPHFTVSGLLEALKSKRYTHTRLQRLL 293 L L T T A+L ++ EGLE+R+ R L L TV LLEALK+KRYT T+LQR+L Sbjct: 261 LFQALLTHTPAQLESFLEVTEGLEHRVQRSLSQLEQPTVDALLEALKTKRYTRTKLQRML 320 Query: 294 IHALLNHSKQEMAPAVLAQGPGYIRVLGFRESGR 327 +H +LNH K M LA+GPGYIRVLGF E+GR Sbjct: 321 MHIMLNHDKASMNREELAKGPGYIRVLGFSETGR 354 >B1DJM5.1 B1DJM5_9BACL Putative uncharacterized protein Length = 415 Score = 264 bits (675), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 152/332 (45%), Positives = 196/332 (59%), Gaps = 9/332 (2%) Query: 1 LSGADRSIVVMSGPFTQRGEPAAVSKQARTEMALHMGADVVIELPVAYAVQPAEWFAFGA 60 ++ AD + VMSG F QRGEPA + K ARTE AL G D+V+ELPVAYA Q AEWFA+GA Sbjct: 27 IAKADAVVAVMSGHFLQRGEPAVMDKWARTEAALRGGCDLVLELPVAYATQAAEWFAYGA 86 Query: 61 VALLEATGVVDSLCFGSEAGTLSALQPMAEFLADESSALQGEIRRRMALGXXXXXXXXXX 120 VA LEATGVVD+ CFG+E+G + L A+ +A E A Q +R + G Sbjct: 87 VATLEATGVVDAFCFGTESGEIEVLHEAAKLVAHEPPAFQNLLREALERGSSYPNAYSSA 146 Query: 121 XXXXXXXXXXXXXRRPGAAGL-LRQPNNSLGLHYLIALRRLGSKIRPLTAPRTGAGFHDP 179 R AA QPN++LGLHYLIA R+G K+ P T R + + Sbjct: 147 IASYLTSIG-----RADAADFPFAQPNHTLGLHYLIASERIGGKMLPYTIRREKSEYGQT 201 Query: 180 LQSGSPIASATAIRRLLSEGGSPAA---YMPEYSMSVLEREHAAGRGPLNLESFRIPLRH 236 + S IASATAIR+LL EGG A +P + V++RE ++GR P++ +F L H Sbjct: 202 TVTDSAIASATAIRKLLLEGGELEASRPLVPAGTFDVMQREWSSGRSPVSWNNFVHRLLH 261 Query: 237 LLATRTAAELHGLQDMNEGLENRLLRVLPALPHFTVSGLLEALKSKRYTHTRLQRLLIHA 296 + T T EL G ++M EGLE RLL+ LP L H + LL+ALK+KRYT T+LQR L+ Sbjct: 262 GVVTHTPNELAGYREMTEGLEYRLLQALPKLDHTGIEPLLDALKTKRYTRTKLQRSLLSI 321 Query: 297 LLNHSKQEMAPAVLAQGPGYIRVLGFRESGRQ 328 LL H K++ L G YIRVLGF G+Q Sbjct: 322 LLRHKKEDFTSEKLTAGVQYIRVLGFTSKGQQ 353 >B8I2X9.1 B8I2X9_CLOCE Putative uncharacterized protein Length = 416 Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 128/330 (38%), Positives = 182/330 (55%), Gaps = 8/330 (2%) Query: 1 LSGADRSIVVMSGPFTQRGEPAAVSKQARTEMALHMGADVVIELPVAYAVQPAEWFAFGA 60 L+G D + VMSG F QRGEPA ++K ARTE+AL G D++IELPV +AV AE+F++GA Sbjct: 27 LTGCDAVVCVMSGNFIQRGEPAIINKFARTEIALGNGVDLIIELPVPFAVSSAEFFSYGA 86 Query: 61 VALLEATGVVDSLCFGSEAGTLSALQPMAEFLADESSALQGEIRRRMALGXXXXXXXXXX 120 V++L G+VD + FGSE+G + +LQ +AE L E + + E++++++ G Sbjct: 87 VSILNNIGIVDCISFGSESGDIISLQKIAEILVSEPQSYKAELKKQLSAGLSFPVCRQRA 146 Query: 121 XXXXXXXXXXXXXRRPGAAGLLRQPNNSLGLHYLIALRRLGSKIRPLTAPRTGAGFHDPL 180 + LL NN L L YL AL RL S I+P T R ++ P Sbjct: 147 LDKYLKIQNDS---NESLSSLLETSNNILALEYLKALSRLNSPIQPYTVKRISNCYNTPQ 203 Query: 181 QSGSPIASATAIRRLL--SEGGSPAAYMPEYSMSVLEREHAAGRGPLNLESFRIPLRHLL 238 +GS I+SATAIR + SE +P + +++RE + GRGP +L SF + L Sbjct: 204 LTGS-ISSATAIRNSIYKSEIDVSRQALPTLAQQIMDREFSLGRGPNSLYSFEDIILAFL 262 Query: 239 ATRTAAELHGLQDMNEGLENRLLRVLPALPHFTVSGLLEALKSKRYTHTRLQRLLIHALL 298 T EL +QD++EGLE R+ F LL + +KRY TR+QR+LI L Sbjct: 263 RHATPQELEKIQDVSEGLEYRIKNAADNSGSF--DDLLANICTKRYPKTRIQRILISLLA 320 Query: 299 NHSKQEMAPAVLAQGPGYIRVLGFRESGRQ 328 + +M + GP Y R+LGF E GRQ Sbjct: 321 GMKRFDMEQFMACGGPQYARILGFNEIGRQ 350 >A8MHA3.1 Y1446_ALKOO UPF0348 protein Clos_1446 Length = 424 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 131/334 (39%), Positives = 179/334 (53%), Gaps = 10/334 (2%) Query: 1 LSGADRSIVVMSGPFTQRGEPAAVSKQARTEMALHMGADVVIELPVAYAVQPAEWFAFGA 60 ++ A ++ VMSG F QRGEPA V K R +MA+ G D++IELP +YA AE FA+GA Sbjct: 27 ITKATHTVAVMSGNFLQRGEPAMVHKWERAKMAVKSGVDLIIELPTSYACATAELFAYGA 86 Query: 61 VALLEATGVVDSLCFGSEAGTLSALQPMAEFLADESSALQGEIRRRMALGXX---XXXXX 117 + LL G VD LCFGSE G +S L +AE L+ +S Q +R + LG Sbjct: 87 ITLLHRLGSVDCLCFGSEIGNVSPLLQIAEVLSTPTSRFQEVLREHVNLGGTFPVARSMA 146 Query: 118 XXXXXXXXXXXXXXXXRRPGAAGLLRQPNNSLGLHYLIALRRLGSKIRPLTAPRTGAGFH 177 R A L+ PNN LG+ YL +L++L S I P T R A +H Sbjct: 147 LLKYLEETKEYDVASLREISDA--LKSPNNILGIEYLKSLKKLNSPIVPYTISRKSADYH 204 Query: 178 DPLQSGSPIASATAIRR-LLSEG--GSPAAYMPEYSMSVLEREHAAGRGPLNLESFRIPL 234 + S IASATAIR LL E A+ +P+ ++ +L G P+ F+ L Sbjct: 205 SKDITDSSIASATAIREHLLKENHLKGIASVVPKDTLDILAHSVGIGMAPIFATDFQQIL 264 Query: 235 RHLLATRTAAELHGLQDMNEGLENRLLRVLPALPHFTVSGLLEALKSKRYTHTRLQRLLI 294 LL T L + D+ EGLENR+ A T++ L EA+KSKRYT TR+QR+L+ Sbjct: 265 LALLRRSTPENLKNIFDVEEGLENRIYHC--AHQASTLNELYEAIKSKRYTRTRIQRILM 322 Query: 295 HALLNHSKQEMAPAVLAQGPGYIRVLGFRESGRQ 328 H LLN +K+++ GP Y R+L F + GR+ Sbjct: 323 HLLLNITKKDIFYFNDHGGPQYARILAFNDKGRE 356 >B6FN51.1 B6FN51_9CLOT Putative uncharacterized protein Length = 408 Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 123/329 (37%), Positives = 180/329 (54%), Gaps = 16/329 (4%) Query: 1 LSGADRSIVVMSGPFTQRGEPAAVSKQARTEMALHMGADVVIELPVAYAVQPAEWFAFGA 60 L+ AD+ +VVMSG F QRG PA + K R +MAL GAD+VIELPV YA AE+FA+GA Sbjct: 27 LTKADKVVVVMSGNFVQRGAPALLPKHLRAKMALKSGADLVIELPVFYACASAEYFAYGA 86 Query: 61 VALLEATGVVDSLCFGSEAGTLSALQPMAEFLADESSALQGEIRRRMALGXXXXXXXXXX 120 V+LL A VDS+CFGSE G L+ LQ A+ +A+E A + ++ + G Sbjct: 87 VSLLHALRCVDSICFGSECGDLTLLQKAADIMAEEPDAYKHSLQSYLRDG--------YR 138 Query: 121 XXXXXXXXXXXXXRRPGAAGLLRQPNNSLGLHYLIALRRLGSKIRPLTAPRTGAGFHDPL 180 + G A +L QPNN LG+ YL AL RL S I+P R G+G+H+ Sbjct: 139 FPLARQKAFQDFTKEEGIASILEQPNNILGIEYLKALSRLNSSIQPFAISRIGSGYHET- 197 Query: 181 QSGSPIASATAIRRLLS---EGGSPAAYMPEYSMSVLEREHAAGRGPLNLESFRIPLRHL 237 +SA+AIR+ +S E S + ++P+ ++++L +E+ R P+ L F + L++ Sbjct: 198 DLHKIYSSASAIRKTVSTTKELESLSGHVPDSALTLL-KENYQVRFPVFLNDFSLLLKYR 256 Query: 238 LATRTAAELHGLQDMNEGLENRLLRVLPALPHFTVSGLLEALKSKRYTHTRLQRLLIHAL 297 L + TA L D++ L NR++R F L +K T+ R+ R L+H L Sbjct: 257 LLSETADTLTQYLDVSVELANRIIRCRSQFRSF--EQFCHLLNTKESTYARVSRALMHIL 314 Query: 298 LNHSKQEMAPAVLAQGPGYIRVLGFRESG 326 L K + + A+ P Y R+LGFR+ Sbjct: 315 LQIQKDDFSLCT-AKAPFYFRILGFRKES 342 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.135 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,757,420,691 Number of extensions: 68254120 Number of successful extensions: 159531 Number of sequences better than 1.0e-05: 389 Number of HSP's gapped: 158631 Number of HSP's successfully gapped: 584 Length of query: 332 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 196 Effective length of database: 1,779,438,163 Effective search space: 348769879948 Effective search space used: 348769879948 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)