BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0557.0063.p (171 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KGL6.1 B3KGL6_9BACI Methyltransferase 225 1e-57 B1DJM9.1 B1DJM9_9BACL Methyltransferase 188 2e-46 C3BP33.1 C3BP33_9BACI Methyltransferase 174 2e-42 C3B718.1 C3B718_BACMY Methyltransferase 174 2e-42 C3APN4.1 C3APN4_BACMY Methyltransferase 174 2e-42 >B3KGL6.1 B3KGL6_9BACI Methyltransferase Length = 201 Score = 225 bits (574), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 109/157 (69%), Positives = 129/157 (82%) Query: 1 MFSMIGPYFDGGAALDLFAGTGGLGIEALSRGMDQAVFVDMEQKSIDTVRANLKAAKVEA 60 +FSMIGPYF+GG ALDLFAGTGGLGIEALSRGMD+AVFVD+E KSI T++ NLKAA++E Sbjct: 32 IFSMIGPYFEGGIALDLFAGTGGLGIEALSRGMDRAVFVDVEPKSISTIKDNLKAARLEE 91 Query: 61 QAEVYRNDAGRALSALEKRGRSFDLVFLDPPYRLKHGNELMLAMVQKGLLREDAVIVLEH 120 AEVYRNDA RAL ALEKRG FDLVFLDPPYR K+G+ELML M ++GLL++ A++VLE+ Sbjct: 92 SAEVYRNDAARALKALEKRGYGFDLVFLDPPYRFKNGDELMLDMAERGLLQDSALVVLEY 151 Query: 121 ESSYEYPEVIPGFRRTRQAVYGETAVSIYKYEASSQQ 157 ESSY Y E F R A YGETAVSIY+Y+ + Q Sbjct: 152 ESSYNYAEEFGDFHCIRTAKYGETAVSIYRYDTAQDQ 188 >B1DJM9.1 B1DJM9_9BACL Methyltransferase Length = 196 Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 87/151 (57%), Positives = 116/151 (76%) Query: 1 MFSMIGPYFDGGAALDLFAGTGGLGIEALSRGMDQAVFVDMEQKSIDTVRANLKAAKVEA 60 +FSMIGP+FDGG ALDLFAGTGGLGIEA SRG+++ +F+D E+ SID ++ N +AA + Sbjct: 32 IFSMIGPFFDGGLALDLFAGTGGLGIEAWSRGIERTIFIDREKISIDIIKLNTEAAGMGR 91 Query: 61 QAEVYRNDAGRALSALEKRGRSFDLVFLDPPYRLKHGNELMLAMVQKGLLREDAVIVLEH 120 AE+YRNDA RAL LEKRG +F +VFLDPPYRL H +ELM + Q+ LL + A IV+EH Sbjct: 92 HAEIYRNDADRALKLLEKRGIAFSIVFLDPPYRLTHMDELMADLAQRSLLEDGATIVVEH 151 Query: 121 ESSYEYPEVIPGFRRTRQAVYGETAVSIYKY 151 ++ +EYP+ + F R+ YG+TAV+IY+Y Sbjct: 152 DAGHEYPDEMEHFILVRKQKYGDTAVTIYRY 182 >C3BP33.1 C3BP33_9BACI Methyltransferase Length = 188 Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 85/157 (54%), Positives = 109/157 (69%) Query: 1 MFSMIGPYFDGGAALDLFAGTGGLGIEALSRGMDQAVFVDMEQKSIDTVRANLKAAKVEA 60 +F+MIGPYF+GG ALDLF G+GGLGIEALSRG+D+A+FVD + K++ + NL++ +V Sbjct: 32 IFNMIGPYFEGGIALDLFGGSGGLGIEALSRGVDKAIFVDRDNKAVKVIHQNLESCRVHD 91 Query: 61 QAEVYRNDAGRALSALEKRGRSFDLVFLDPPYRLKHGNELMLAMVQKGLLREDAVIVLEH 120 QAEVYRNDA RAL AL KR SFDL+ LDPPY+ + L+ M Q GLL ED +I+ EH Sbjct: 92 QAEVYRNDAERALKALIKRELSFDLILLDPPYKDQKIISLISVMDQHGLLNEDGLIMAEH 151 Query: 121 ESSYEYPEVIPGFRRTRQAVYGETAVSIYKYEASSQQ 157 PE I G + R YG TA+SIYK+E + Sbjct: 152 GDDVVLPEAIGGLVKVRAENYGMTAISIYKHEGEGTE 188 >C3B718.1 C3B718_BACMY Methyltransferase Length = 188 Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 85/157 (54%), Positives = 109/157 (69%) Query: 1 MFSMIGPYFDGGAALDLFAGTGGLGIEALSRGMDQAVFVDMEQKSIDTVRANLKAAKVEA 60 +F+MIGPYF+GG ALDLF G+GGLGIEALSRG+D+A+FVD + K++ + NL++ +V Sbjct: 32 IFNMIGPYFEGGIALDLFGGSGGLGIEALSRGVDKAIFVDRDNKAVKVIHQNLESCRVHD 91 Query: 61 QAEVYRNDAGRALSALEKRGRSFDLVFLDPPYRLKHGNELMLAMVQKGLLREDAVIVLEH 120 QAEVYRNDA RAL AL KR SFDL+ LDPPY+ + L+ M Q GLL ED +I+ EH Sbjct: 92 QAEVYRNDAERALKALIKRELSFDLILLDPPYKDQKIISLISVMDQHGLLNEDGLIMAEH 151 Query: 121 ESSYEYPEVIPGFRRTRQAVYGETAVSIYKYEASSQQ 157 PE I G + R YG TA+SIYK+E + Sbjct: 152 GDDVVLPEAIGGLVKVRAENYGMTAISIYKHEGEGTE 188 >C3APN4.1 C3APN4_BACMY Methyltransferase Length = 188 Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 85/157 (54%), Positives = 109/157 (69%) Query: 1 MFSMIGPYFDGGAALDLFAGTGGLGIEALSRGMDQAVFVDMEQKSIDTVRANLKAAKVEA 60 +F+MIGPYF+GG ALDLF G+GGLGIEALSRG+D+A+FVD + K++ + NL++ +V Sbjct: 32 IFNMIGPYFEGGIALDLFGGSGGLGIEALSRGVDKAIFVDRDNKAVKVIHQNLESCRVHD 91 Query: 61 QAEVYRNDAGRALSALEKRGRSFDLVFLDPPYRLKHGNELMLAMVQKGLLREDAVIVLEH 120 QAEVYRNDA RAL AL KR SFDL+ LDPPY+ + L+ M Q GLL ED +I+ EH Sbjct: 92 QAEVYRNDAERALKALIKRELSFDLILLDPPYKDQKIISLISVMDQHGLLNEDGLIMAEH 151 Query: 121 ESSYEYPEVIPGFRRTRQAVYGETAVSIYKYEASSQQ 157 PE I G + R YG TA+SIYK+E + Sbjct: 152 GDDVVLPEAIGGLVKVRAENYGMTAISIYKHEGEGTE 188 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.133 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 962,047,403 Number of extensions: 35024125 Number of successful extensions: 116950 Number of sequences better than 1.0e-05: 1562 Number of HSP's gapped: 116425 Number of HSP's successfully gapped: 1562 Length of query: 171 Length of database: 3,060,696,203 Length adjustment: 126 Effective length of query: 45 Effective length of database: 1,873,648,313 Effective search space: 84314174085 Effective search space used: 84314174085 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 126 (53.1 bits)