BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0557.0042.p (316 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KBI5.1 B3KBI5_9BACI Rhodanese domain protein 363 8e-99 B1D9Y1.1 B1D9Y1_9BACL Rhodanese domain protein 327 1e-87 C5D2I6.1 C5D2I6_9BACI Rhodanese domain protein 310 8e-83 C1ENL1.1 C1ENL1_BACC3 Rhodanese-like domain protein 296 1e-78 Q6HKY2.1 Q6HKY2_BACHK Thiosulfate sulfurtransferase EC=2.8.1.1 296 1e-78 >B3KBI5.1 B3KBI5_9BACI Rhodanese domain protein Length = 278 Score = 363 bits (933), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 174/289 (60%), Positives = 210/289 (72%), Gaps = 11/289 (3%) Query: 25 MDATVTKRWLLARLYEPEQTIVDCRFTLGKPEAGRESYEQEHIPGAVYLDLEHDLSSPVG 84 M+ VT +WLLARLYEP+ IVDCRF LGKPE+GR YE+ HIP AVYLDLE DLSSP+ Sbjct: 1 MNNIVTMKWLLARLYEPDLVIVDCRFALGKPESGRALYEESHIPRAVYLDLEKDLSSPIT 60 Query: 85 EHGGRHPLPDPQVLAARLAKLGIGNGSRIVAYDDESGMNAARLWWLLRYLGHENVFILEG 144 EHGGRHPLPD LA RL + GI + SR+V YDD+ G A+RLWWLL+Y GHE ++L+ Sbjct: 61 EHGGRHPLPDLDHLAQRLGQSGIQSSSRVVIYDDQGGAMASRLWWLLKYTGHEQAYVLDE 120 Query: 145 GFSAWKAEKFPVTDHQPVRVPSSFEPKVQPQMLADVNEVRRISEXXXXXXXXXXXXXXXX 204 GF+AWK +PVTD QPV +P ++ ++P L V+EVR+ S+ Sbjct: 121 GFTAWKNASYPVTDEQPVVIPVTYGINLKPDKLVRVDEVRKASQ-----------QGSKT 169 Query: 205 XIDSRAHERYLGLEETLDKKAGHIPGAVNFFWKNTQNTDGSVKSAEQLQEHFAGLDKDAE 264 IDSR RY GLEE +D KAGHIPGAVN+FWK + G K AE ++EHF+ + +DAE Sbjct: 170 LIDSREPRRYAGLEEPMDTKAGHIPGAVNYFWKGVLDDSGHWKDAESIREHFSDIPQDAE 229 Query: 265 IIVYCGSGVTACPNVLALEKAGYKNVRLYPGSWSDWISYEGNPIATGEE 313 IIVYCGSGVTACPNVLALE+AGY NV+LY GSWSDWISYE NP+ATGEE Sbjct: 230 IIVYCGSGVTACPNVLALEEAGYGNVKLYAGSWSDWISYEENPVATGEE 278 >B1D9Y1.1 B1D9Y1_9BACL Rhodanese domain protein Length = 278 Score = 327 bits (837), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 161/289 (55%), Positives = 195/289 (67%), Gaps = 11/289 (3%) Query: 25 MDATVTKRWLLARLYEPEQTIVDCRFTLGKPEAGRESYEQEHIPGAVYLDLEHDLSSPVG 84 M+ V+ +WLLARLYE + IVDCRF LGKP+ GRE+YE HI GAV+LDLE DLS+P+ Sbjct: 1 MNNIVSLKWLLARLYETDLVIVDCRFQLGKPDFGREAYEASHIAGAVFLDLEKDLSAPID 60 Query: 85 EHGGRHPLPDPQVLAARLAKLGIGNGSRIVAYDDESGMNAARLWWLLRYLGHENVFILEG 144 EHGGRHPLPD L L+K+GI N +R+VAYDD+ G A+RLWWLL+YLGHE VF+L+ Sbjct: 61 EHGGRHPLPDITDLTIALSKVGISNETRVVAYDDQGGAFASRLWWLLKYLGHEQVFVLDE 120 Query: 145 GFSAWKAEKFPVTDHQPVRVPSSFEPKVQPQMLADVNEVRRISEXXXXXXXXXXXXXXXX 204 GF+AW+ FPV Q VP+ + VQ ML +++EV+ Sbjct: 121 GFTAWQNAGFPVNAEQKTLVPARYLATVQHNMLIEMDEVKE-----------KLGAEHIT 169 Query: 205 XIDSRAHERYLGLEETLDKKAGHIPGAVNFFWKNTQNTDGSVKSAEQLQEHFAGLDKDAE 264 IDSR RY G E LD+ AGHIPGA+N W + DG KSA++ F L KD E Sbjct: 170 LIDSRDGARYRGEVEPLDRIAGHIPGAINRLWSEGKGEDGKWKSADEQAARFEDLPKDQE 229 Query: 265 IIVYCGSGVTACPNVLALEKAGYKNVRLYPGSWSDWISYEGNPIATGEE 313 IVYCGSGVTACPNVLAL++AG+ VRLY GSWSDWISYEGNPI GEE Sbjct: 230 TIVYCGSGVTACPNVLALQEAGFTKVRLYAGSWSDWISYEGNPIEVGEE 278 >C5D2I6.1 C5D2I6_9BACI Rhodanese domain protein Length = 278 Score = 310 bits (795), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 151/289 (52%), Positives = 193/289 (66%), Gaps = 11/289 (3%) Query: 25 MDATVTKRWLLARLYEPEQTIVDCRFTLGKPEAGRESYEQEHIPGAVYLDLEHDLSSPVG 84 M V++ WL RL + + I+DCRF L P+ G Y ++HIPGA+Y DLE DLS+PV Sbjct: 1 MKHIVSQAWLSERLNKEDVRIIDCRFYLNDPKRGLAEYIEDHIPGALYFDLEKDLSAPVS 60 Query: 85 EHGGRHPLPDPQVLAARLAKLGIGNGSRIVAYDDESGMNAARLWWLLRYLGHENVFILEG 144 HGGRHPLP + LA +L+ GI +VAYDD+ G A+R WWLLRYLGHE V++L+G Sbjct: 61 NHGGRHPLPTVEELAEKLSAAGIDETVTVVAYDDQDGAMASRCWWLLRYLGHERVYVLDG 120 Query: 145 GFSAWKAEKFPVTDHQPVRVPSSFEPKVQPQMLADVNEVRRISEXXXXXXXXXXXXXXXX 204 G++ WK +PVT P SF+P+ QP LA V++VRR + Sbjct: 121 GYTKWKEAGYPVTAEVAAVKPRSFQPRPQPSWLATVDDVRRAVQ-----------ESSAI 169 Query: 205 XIDSRAHERYLGLEETLDKKAGHIPGAVNFFWKNTQNTDGSVKSAEQLQEHFAGLDKDAE 264 IDSR +RY G+EE +D+ AGHIPGA++ FWK+ +G KS ++ E F+ + KDA Sbjct: 170 IIDSREWKRYAGIEEPIDRIAGHIPGALHMFWKDCVTDEGYWKSPQEQAERFSAIKKDAP 229 Query: 265 IIVYCGSGVTACPNVLALEKAGYKNVRLYPGSWSDWISYEGNPIATGEE 313 IIVYCGSGVTACPNVLAL++AGY NVRLY GSWSDWISY NPIATGE+ Sbjct: 230 IIVYCGSGVTACPNVLALKEAGYTNVRLYAGSWSDWISYPENPIATGEK 278 >C1ENL1.1 C1ENL1_BACC3 Rhodanese-like domain protein Length = 279 Score = 296 bits (759), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 145/285 (50%), Positives = 181/285 (63%), Gaps = 8/285 (2%) Query: 29 VTKRWLLARLYEPEQTIVDCRFTLGKPEAGRESYEQEHIPGAVYLDLEHDLSSPVGEHGG 88 VT WL + + I+DCRF L P GRE YE+EHIP A+Y DL DLSSPV EHGG Sbjct: 3 VTVEWLREHIEDENVRIIDCRFDLANPNWGREKYEEEHIPHALYFDLNVDLSSPVTEHGG 62 Query: 89 RHPLPDPQVLAARLAKLGIGNGSRIVAYDDESGMNAARLWWLLRYLGHENVFILEGGFSA 148 RHPLP+ + A +L++ GI ++ YD E+G NA+RLWWLL Y+GHE V+IL+GGF A Sbjct: 63 RHPLPNVEEFADKLSQAGIDEHKTVIVYDSEAGANASRLWWLLNYVGHEKVYILDGGFPA 122 Query: 149 WKAEKFPVTDHQPVRVPSSFEPKVQPQMLADVNEVRRISEXXXXXXXXXXXXXXXXXIDS 208 WK PVT P+ + +F+ VQ ML + VR IDS Sbjct: 123 WKENGLPVTPEIPIVIRKTFKANVQDHMLVTMETVRE--------NIDAGKGKDVTLIDS 174 Query: 209 RAHERYLGLEETLDKKAGHIPGAVNFFWKNTQNTDGSVKSAEQLQEHFAGLDKDAEIIVY 268 R +RY G+EE +D+KAGHIP AVN+FWK+ G K+ Q QE F L KD E IVY Sbjct: 175 REPKRYAGVEELVDQKAGHIPTAVNYFWKDGMLQSGQFKNEAQQQERFQNLSKDKETIVY 234 Query: 269 CGSGVTACPNVLALEKAGYKNVRLYPGSWSDWISYEGNPIATGEE 313 CGSGVTACPN++AL+ AG++NV+LY GSWSDWISY N IA E+ Sbjct: 235 CGSGVTACPNIVALKLAGFQNVKLYAGSWSDWISYPENQIAKEED 279 >Q6HKY2.1 Q6HKY2_BACHK Thiosulfate sulfurtransferase EC=2.8.1.1 Length = 277 Score = 296 bits (759), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 145/285 (50%), Positives = 181/285 (63%), Gaps = 10/285 (3%) Query: 29 VTKRWLLARLYEPEQTIVDCRFTLGKPEAGRESYEQEHIPGAVYLDLEHDLSSPVGEHGG 88 VT WL + + I+DCRF L P GRE YE+EHIP A+Y DL DLSSPV EHGG Sbjct: 3 VTVEWLREHIEDENVRIIDCRFDLANPNWGREKYEEEHIPHALYFDLNVDLSSPVTEHGG 62 Query: 89 RHPLPDPQVLAARLAKLGIGNGSRIVAYDDESGMNAARLWWLLRYLGHENVFILEGGFSA 148 RHPLP+ + A +L++ GI ++AYD E+G NA+RLWWLL Y+GHE V+IL+GGF A Sbjct: 63 RHPLPNVEEFADKLSQAGIDEHMTVIAYDSEAGANASRLWWLLNYVGHEKVYILDGGFPA 122 Query: 149 WKAEKFPVTDHQPVRVPSSFEPKVQPQMLADVNEVRRISEXXXXXXXXXXXXXXXXXIDS 208 WK P+T PV + +F+ +Q ML + VR IDS Sbjct: 123 WKENGLPITPEIPVVIRKTFKANIQDHMLVTMETVRE----------NIDVGKDVTLIDS 172 Query: 209 RAHERYLGLEETLDKKAGHIPGAVNFFWKNTQNTDGSVKSAEQLQEHFAGLDKDAEIIVY 268 R +RY G+EE +D KAGHIP AVN+FWK+ G K+ Q QE F L KD E IVY Sbjct: 173 REPKRYAGVEELVDPKAGHIPTAVNYFWKDGMLQSGQFKNEAQQQERFQNLSKDKETIVY 232 Query: 269 CGSGVTACPNVLALEKAGYKNVRLYPGSWSDWISYEGNPIATGEE 313 CGSGVTACPN++AL+ AG++NV+LY GSWSDWISY N IA E+ Sbjct: 233 CGSGVTACPNIVALKLAGFQNVKLYAGSWSDWISYPENQIAKEED 277 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,980,369,061 Number of extensions: 84459000 Number of successful extensions: 198899 Number of sequences better than 1.0e-05: 1393 Number of HSP's gapped: 194840 Number of HSP's successfully gapped: 1511 Length of query: 316 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 181 Effective length of database: 1,788,859,178 Effective search space: 323783511218 Effective search space used: 323783511218 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)