BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0557.0040.p (142 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C3BBT9.1 C3BBT9_BACMY Putative uncharacterized protein 169 9e-41 C3AWH9.1 C3AWH9_BACMY Putative uncharacterized protein 169 9e-41 A5EA42.1 A5EA42_BRASB Putative uncharacterized protein 118 2e-25 C5CYP9.1 C5CYP9_VARPD Putative uncharacterized protein 116 6e-25 A7HUL6.1 A7HUL6_PARL1 Putative uncharacterized protein 114 3e-24 >C3BBT9.1 C3BBT9_BACMY Putative uncharacterized protein Length = 143 Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 82/136 (60%), Positives = 102/136 (75%), Gaps = 1/136 (0%) Query: 4 LSTIRKEILIEAPPEQVWDAVSDIGAVHYRLVPGYTENTLVDGYERTLLLPNGGMTREYI 63 ++TIRKEI+IEA +QVWDAVSDIGAVH R VPGYT +T +DG +R L P+GG+ RE I Sbjct: 8 MATIRKEIVIEANADQVWDAVSDIGAVHQRFVPGYTLDTQLDGNDRILYFPHGGVVRERI 67 Query: 64 VSIDDEERRMAYAVVEGRM-PFLHHHASFQVFPHGDNGAKLIWITDFLPTHLAPEIEARI 122 VSID E R +YAVVEG P +HH+ASFQVF +N + L+WITDFLP H PE+ RI Sbjct: 68 VSIDAETYRFSYAVVEGSNPPLIHHYASFQVFAKDENESILVWITDFLPNHTEPEMRIRI 127 Query: 123 KRGAEVMKETIEAEAK 138 R ++V+K+TIE E K Sbjct: 128 DRASQVIKQTIEKEVK 143 >C3AWH9.1 C3AWH9_BACMY Putative uncharacterized protein Length = 143 Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 82/136 (60%), Positives = 102/136 (75%), Gaps = 1/136 (0%) Query: 4 LSTIRKEILIEAPPEQVWDAVSDIGAVHYRLVPGYTENTLVDGYERTLLLPNGGMTREYI 63 ++TIRKEI+IEA +QVWDAVSDIGAVH R VPGYT +T +DG +R L P+GG+ RE I Sbjct: 8 MATIRKEIVIEANADQVWDAVSDIGAVHQRFVPGYTLDTQLDGNDRILYFPHGGVVRERI 67 Query: 64 VSIDDEERRMAYAVVEGRM-PFLHHHASFQVFPHGDNGAKLIWITDFLPTHLAPEIEARI 122 VSID E R +YAVVEG P +HH+ASFQVF +N + L+WITDFLP H PE+ RI Sbjct: 68 VSIDAETYRFSYAVVEGSNPPLIHHYASFQVFAKDENESILVWITDFLPNHTEPEMRIRI 127 Query: 123 KRGAEVMKETIEAEAK 138 R ++V+K+TIE E K Sbjct: 128 DRASQVIKQTIEKEVK 143 >A5EA42.1 A5EA42_BRASB Putative uncharacterized protein Length = 133 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 56/130 (43%), Positives = 81/130 (62%), Gaps = 2/130 (1%) Query: 4 LSTIRKEILIEAPPEQVWDAVSDIGAVHYRLVPGYTENTLVDGYERTLLLPNGGMTREYI 63 +++I K+I I A VWDAV D GAVH RL PG+ +T DG R + NG + RE++ Sbjct: 1 MASICKDIPISASAAAVWDAVRDFGAVHTRLAPGFVIDTKRDGDVRIVSFANGKVVREHL 60 Query: 64 VSIDDEERRMAYAVVEGRMPFLHHHASFQVFPHGDNGAKLIWITDFLPTHLAPEIEARIK 123 + D RR+ YA+ + RM H+AS Q+ P G+ ++IWITD LP +AP IE +++ Sbjct: 61 IDCSDARRRLVYAIDDARMQ--RHNASMQIIPDGEQRCRMIWITDVLPHDIAPSIEQQME 118 Query: 124 RGAEVMKETI 133 GA VM+ T+ Sbjct: 119 LGAAVMQRTL 128 >C5CYP9.1 C5CYP9_VARPD Putative uncharacterized protein Length = 133 Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 59/133 (44%), Positives = 81/133 (60%), Gaps = 3/133 (2%) Query: 4 LSTIRKEILIEAPPEQVWDAVSDIGAVHYRLVPGYTENTLVDGY-ERTLLLPNGGMTREY 62 ++TI KE ++EA +VWDA+ D GAVH RL PG+ +DG R + NG + RE Sbjct: 1 MATIYKEFIVEADASRVWDALRDFGAVHTRLAPGFLTGCELDGKGARIVSFANGLVAREL 60 Query: 63 IVSIDDEERRMAYAVVEGRMPFLHHHASFQVFPHGDNGAKLIWITDFLPTHLAPEIEARI 122 +V ID+ R+AY V G+ HHHAS QVF G+ ++ +WITD LP LA IE + Sbjct: 61 LVGIDEANSRLAYTVTGGKAS--HHHASAQVFALGEGRSRFVWITDVLPDELAAYIEPMM 118 Query: 123 KRGAEVMKETIEA 135 +G MK+T+EA Sbjct: 119 VQGGVAMKKTLEA 131 >A7HUL6.1 A7HUL6_PARL1 Putative uncharacterized protein Length = 135 Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 54/136 (39%), Positives = 82/136 (60%), Gaps = 1/136 (0%) Query: 4 LSTIRKEILIEAPPEQVWDAVSDIGAVHYRLVPGYTENTLVDGYERTLLLPNGGMTREYI 63 +++IRK+I I+AP VWDAV D+G +H R VPG+ +T ++ R + NG + RE I Sbjct: 1 MASIRKDIEIDAPAAAVWDAVRDVGQIHTRFVPGFVTDTKLEEGARIVTFANGLVVRELI 60 Query: 64 VSIDDEERRMAYAVVEGRMPFLHHHASFQVFPHGDNGAKLIWITDFLPTHLAPEIEARIK 123 + +D++ RR+AYAV M HH ASF+V P G+ +L+WI DFLP A + + Sbjct: 61 LDLDEDRRRLAYAVSGSEM-MSHHSASFEVVPEGEGRCRLVWIADFLPHEAAEPVGGMMT 119 Query: 124 RGAEVMKETIEAEAKG 139 GA +M+ + + G Sbjct: 120 EGAAIMQAALGRKGGG 135 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.139 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 910,754,933 Number of extensions: 36244037 Number of successful extensions: 72322 Number of sequences better than 1.0e-05: 16 Number of HSP's gapped: 72346 Number of HSP's successfully gapped: 16 Length of query: 142 Length of database: 3,060,696,203 Length adjustment: 105 Effective length of query: 37 Effective length of database: 2,071,489,628 Effective search space: 76645116236 Effective search space used: 76645116236 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 126 (53.1 bits)