BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0557.0031.p
         (210 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q893A4.1 Q893A4_CLOTE Putative transcriptional regulator              261   3e-68
Q24PP7.1 Q24PP7_DESHY Putative uncharacterized protein                253   8e-66
B8FZW7.1 B8FZW7_DESHD Methyltransferase                               251   3e-65
C0EF05.1 C0EF05_9CLOT Putative uncharacterized protein                246   7e-64
B2TR67.1 B2TR67_CLOBB Methyltransferase family protein                224   3e-57

>Q893A4.1 Q893A4_CLOTE Putative transcriptional regulator
          Length = 215

 Score =  261 bits (667), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 115/205 (56%), Positives = 148/205 (72%)

Query: 6   QYLIFAAGYDTFAYRQPEWAAKLQIFEIDHPATADDKRRRVSALNPTKPSNLHYISFDFN 65
           QYLIFAAGYDTFAYRQPEWA  +QIFE+DHP T  DK++R+  +   K SN+HYIS DF 
Sbjct: 11  QYLIFAAGYDTFAYRQPEWAKNIQIFELDHPFTGVDKQKRIETVMTEKTSNIHYISIDFT 70

Query: 66  EQDLQKRLLDCRAFDPGVISFCSLLGITYYLSKDVFKHFLATITKLLPGGSSIVFDYPDE 125
           E+  ++ L++C  F+   ISFCSLLG+ YYL+K  F H + TI+ ++P GSSIVFDY D+
Sbjct: 71  EETWERNLIECSQFEKNKISFCSLLGVNYYLTKQNFAHAINTISNIVPKGSSIVFDYNDD 130

Query: 126 HTFTPSAKERTQKQVMMAARAGEPMQACYSYEELERMLEDVNLLIYQHFTPDQITGQLFK 185
             +T  A ER +KQ  MA  A E M   YSY ELE++L++ N +IY+H TP++IT Q FK
Sbjct: 131 KAYTEKAGERAKKQATMAGAANEKMLGSYSYMELEKLLDESNFMIYEHLTPNEITDQYFK 190

Query: 186 AYNDSQPAHPIRAFDNVNYCLAVKR 210
            YN + P H + AFDNVNYCLAVK+
Sbjct: 191 KYNKANPNHQMTAFDNVNYCLAVKK 215


>Q24PP7.1 Q24PP7_DESHY Putative uncharacterized protein
          Length = 307

 Score =  253 bits (646), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 116/208 (55%), Positives = 147/208 (70%)

Query: 3   GARQYLIFAAGYDTFAYRQPEWAAKLQIFEIDHPATADDKRRRVSALNPTKPSNLHYISF 62
           GARQYLI  AGYD+FAYRQP WA ++QIFEIDHPATA DKR ++     T P N+ YI+ 
Sbjct: 100 GARQYLILGAGYDSFAYRQPAWAKEIQIFEIDHPATAKDKRAKLEKAKLTIPDNVQYITA 159

Query: 63  DFNEQDLQKRLLDCRAFDPGVISFCSLLGITYYLSKDVFKHFLATITKLLPGGSSIVFDY 122
           DF +Q+ Q  L     F+   ISFCS+LG+ YYLS   F   ++ ++ LLP GSSIVFDY
Sbjct: 160 DFMKQEWQTALTQNIKFNKNQISFCSILGVVYYLSVQTFVDLISGLSALLPVGSSIVFDY 219

Query: 123 PDEHTFTPSAKERTQKQVMMAARAGEPMQACYSYEELERMLEDVNLLIYQHFTPDQITGQ 182
           PDE+T+T    ER +KQ M+AA A E M A YSYE++E +L     LIY+H TP ++TGQ
Sbjct: 220 PDENTYTDKGGERAKKQAMLAATANEKMLAGYSYEDMENVLSSHGFLIYEHLTPGEVTGQ 279

Query: 183 LFKAYNDSQPAHPIRAFDNVNYCLAVKR 210
            F+AYN + P HP+ AFDNVNYCLAV++
Sbjct: 280 YFEAYNHANPLHPMTAFDNVNYCLAVRK 307


>B8FZW7.1 B8FZW7_DESHD Methyltransferase
          Length = 304

 Score =  251 bits (641), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 115/208 (55%), Positives = 146/208 (70%)

Query: 3   GARQYLIFAAGYDTFAYRQPEWAAKLQIFEIDHPATADDKRRRVSALNPTKPSNLHYISF 62
           GARQYLI  AGYD+FAYRQP WA ++QIFEIDHPATA DKR ++     T P N+ YI+ 
Sbjct: 97  GARQYLILGAGYDSFAYRQPAWAKEIQIFEIDHPATAKDKRAKLEKAKLTIPDNVQYITA 156

Query: 63  DFNEQDLQKRLLDCRAFDPGVISFCSLLGITYYLSKDVFKHFLATITKLLPGGSSIVFDY 122
           DF +Q+ Q  L     F+    SFCS+LG+ YYLS   F   ++ ++ LLP GSSIVFDY
Sbjct: 157 DFMKQEWQTALTQNIKFNKNQTSFCSILGVVYYLSVQTFVDLISGLSALLPVGSSIVFDY 216

Query: 123 PDEHTFTPSAKERTQKQVMMAARAGEPMQACYSYEELERMLEDVNLLIYQHFTPDQITGQ 182
           PDE+T+T    ER +KQ M+AA A E M A YSYE++E +L     LIY+H TP ++TGQ
Sbjct: 217 PDENTYTDKGGERAKKQAMLAATANEKMLAGYSYEDMENVLSSHGFLIYEHLTPGEVTGQ 276

Query: 183 LFKAYNDSQPAHPIRAFDNVNYCLAVKR 210
            F+AYN + P HP+ AFDNVNYCLAV++
Sbjct: 277 YFEAYNHANPLHPMTAFDNVNYCLAVRK 304


>C0EF05.1 C0EF05_9CLOT Putative uncharacterized protein
          Length = 304

 Score =  246 bits (629), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 115/208 (55%), Positives = 144/208 (69%)

Query: 3   GARQYLIFAAGYDTFAYRQPEWAAKLQIFEIDHPATADDKRRRVSALNPTKPSNLHYISF 62
           GARQYLI  AGYDTF YRQP+WA  +QIFEIDHPATA DK++R++A     P N+H I+ 
Sbjct: 97  GARQYLILGAGYDTFGYRQPDWAKGIQIFEIDHPATAQDKKKRLAAAGIGIPQNVHAIAV 156

Query: 63  DFNEQDLQKRLLDCRAFDPGVISFCSLLGITYYLSKDVFKHFLATITKLLPGGSSIVFDY 122
           DF+++  Q  L+   AF    +SFCSLLG+ YYLSK  F   L    ++LP GSSI FDY
Sbjct: 157 DFSQEQWQSALVQHPAFQREQVSFCSLLGLVYYLSKTAFVSMLGAFNEILPKGSSIAFDY 216

Query: 123 PDEHTFTPSAKERTQKQVMMAARAGEPMQACYSYEELERMLEDVNLLIYQHFTPDQITGQ 182
           PD+H+F   A +R +KQVM+A  A E M A YS +ELE++L     LIY+H TP ++T Q
Sbjct: 217 PDQHSFCDQAGDRAKKQVMLAEAANEKMLAGYSVQELEQLLSAHGFLIYEHRTPREMTQQ 276

Query: 183 LFKAYNDSQPAHPIRAFDNVNYCLAVKR 210
            F AYN + P HPI A DNVNYCLAV+R
Sbjct: 277 YFAAYNQANPEHPIEALDNVNYCLAVRR 304


>B2TR67.1 B2TR67_CLOBB Methyltransferase family protein
          Length = 305

 Score =  224 bits (571), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 103/207 (49%), Positives = 142/207 (68%)

Query: 4   ARQYLIFAAGYDTFAYRQPEWAAKLQIFEIDHPATADDKRRRVSALNPTKPSNLHYISFD 63
           A+QYLIFAAGYD+FAY QP+W  +++IFEIDHP TA DK  R+   +     N++Y+  D
Sbjct: 99  AKQYLIFAAGYDSFAYHQPQWVKEIEIFEIDHPVTASDKMDRLKKAHLEIHDNVNYVVAD 158

Query: 64  FNEQDLQKRLLDCRAFDPGVISFCSLLGITYYLSKDVFKHFLATITKLLPGGSSIVFDYP 123
           F ++   + L   + FD   ISFCS+LG++YYLSK  F+  +  I +++P GSS+VF+YP
Sbjct: 159 FTQEKWIESLTKNKIFDRNKISFCSVLGLSYYLSKTDFEGLIKAIGEIIPKGSSLVFEYP 218

Query: 124 DEHTFTPSAKERTQKQVMMAARAGEPMQACYSYEELERMLEDVNLLIYQHFTPDQITGQL 183
           D+ T+     ERT+KQVM+A  A E M A YSY+E+E++L     LIY+H TP QIT Q 
Sbjct: 219 DDATYANKVAERTKKQVMLANEANEKMLAGYSYDEMEKLLCKCGFLIYEHLTPKQITEQY 278

Query: 184 FKAYNDSQPAHPIRAFDNVNYCLAVKR 210
           F+ YN +   H + AFDNVNYCLAV++
Sbjct: 279 FEEYNKANSTHYMSAFDNVNYCLAVRQ 305


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.323    0.137    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,298,719,220
Number of extensions: 51910970
Number of successful extensions: 145698
Number of sequences better than 1.0e-05: 223
Number of HSP's gapped: 145546
Number of HSP's successfully gapped: 223
Length of query: 210
Length of database: 3,060,696,203
Length adjustment: 130
Effective length of query: 80
Effective length of database: 1,835,964,253
Effective search space: 146877140240
Effective search space used: 146877140240
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 128 (53.9 bits)