BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0557.0030.p
         (101 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q24PP7.1 Q24PP7_DESHY Putative uncharacterized protein                 95   2e-18
B8FZW7.1 B8FZW7_DESHD Methyltransferase                                93   8e-18
C0EF05.1 C0EF05_9CLOT Putative uncharacterized protein                 87   4e-16
B2TR67.1 B2TR67_CLOBB Methyltransferase family protein                 86   1e-15
Q5WD05.1 Q5WD05_BACSK Putative uncharacterized protein                 69   2e-10

>Q24PP7.1 Q24PP7_DESHY Putative uncharacterized protein
          Length = 307

 Score = 95.1 bits (235), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/71 (60%), Positives = 57/71 (80%)

Query: 1  MKNESFTALVSAFSRAYHAEHNQIKIFDDSLARQLLTKEEYEGIASSMSQGIAFFQPEFA 60
          M+ +S TALVS FSRAYHAE+N++KIFDDS+AR  L++EEY  I+ +M++GI FF P F 
Sbjct: 4  MEQKSVTALVSTFSRAYHAENNEVKIFDDSMARLFLSEEEYGQISKNMAEGIGFFNPSFK 63

Query: 61 GTQEQALRRVV 71
          GT ++ALR VV
Sbjct: 64 GTPDEALRWVV 74


>B8FZW7.1 B8FZW7_DESHD Methyltransferase
          Length = 304

 Score = 92.8 bits (229), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 57/71 (80%)

Query: 1  MKNESFTALVSAFSRAYHAEHNQIKIFDDSLARQLLTKEEYEGIASSMSQGIAFFQPEFA 60
          M+ +S TALVS FSRAYHAE+N++KIF+DS+AR  L++EEY  I+ +M++GI FF P F 
Sbjct: 1  MEQKSVTALVSTFSRAYHAENNEVKIFNDSMARLFLSEEEYGQISKNMAEGIGFFNPSFK 60

Query: 61 GTQEQALRRVV 71
          GT ++ALR VV
Sbjct: 61 GTPDEALRWVV 71


>C0EF05.1 C0EF05_9CLOT Putative uncharacterized protein
          Length = 304

 Score = 87.0 bits (214), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 53/71 (74%)

Query: 1  MKNESFTALVSAFSRAYHAEHNQIKIFDDSLARQLLTKEEYEGIASSMSQGIAFFQPEFA 60
          MK +S TALVSAFSRAYH   N+ KIF+D +A +LLT++EY  I+ +M+ GI FF P FA
Sbjct: 1  MKQKSMTALVSAFSRAYHTRQNETKIFEDCIAGKLLTQDEYRQISQNMASGIGFFNPSFA 60

Query: 61 GTQEQALRRVV 71
           + E+ALR VV
Sbjct: 61 DSPEEALRWVV 71


>B2TR67.1 B2TR67_CLOBB Methyltransferase family protein
          Length = 305

 Score = 85.9 bits (211), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/71 (52%), Positives = 55/71 (77%)

Query: 1  MKNESFTALVSAFSRAYHAEHNQIKIFDDSLARQLLTKEEYEGIASSMSQGIAFFQPEFA 60
          M+ +  +AL+ AFSRAYH++ N++KIFDD++A  LL+KEEY  I  +M+ GI FF P+F 
Sbjct: 1  MEKKFMSALICAFSRAYHSKENEVKIFDDTIAELLLSKEEYNEIGENMTNGIKFFNPKFV 60

Query: 61 GTQEQALRRVV 71
          G+Q++ALR +V
Sbjct: 61 GSQDEALRWIV 71


>Q5WD05.1 Q5WD05_BACSK Putative uncharacterized protein
          Length = 307

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 4/71 (5%)

Query: 5  SFTALVSAFSRAYHAEHNQIKIFDDSLARQLLTKEEYEGIASSMSQGIAFFQPEFA---- 60
          S T+++SAF RAYH+  +Q K+FDD LA +L++++EYE I ++M QGI FF  E A    
Sbjct: 10 SLTSIISAFGRAYHSRFDQPKVFDDYLAERLISEDEYEEIKANMIQGIGFFNEELAQKWK 69

Query: 61 GTQEQALRRVV 71
          G  EQ L+ + 
Sbjct: 70 GHSEQILKWIT 80


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.322    0.133    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 399,116,838
Number of extensions: 10355526
Number of successful extensions: 24598
Number of sequences better than 1.0e-05: 83
Number of HSP's gapped: 24598
Number of HSP's successfully gapped: 83
Length of query: 101
Length of database: 3,060,696,203
Length adjustment: 69
Effective length of query: 32
Effective length of database: 2,410,646,168
Effective search space: 77140677376
Effective search space used: 77140677376
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 126 (53.1 bits)