BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0555.0005.p (330 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K790.1 B3K790_9BACI Glycosyl transferase family 2 462 e-128 Q3MSA3.1 Q3MSA3_9BACL Glycosyltransferase/rhamnosyltransferase 427 e-118 Q7BG45.1 Q7BG45_BACST WsaD 375 e-102 A2BD33.2 A2BD33_9BACI WsbD 373 e-101 B9MLL5.1 B9MLL5_ANATD Glycosyl transferase family 2 283 1e-74 >B3K790.1 B3K790_9BACI Glycosyl transferase family 2 Length = 303 Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust. Identities = 213/284 (75%), Positives = 252/284 (88%), Gaps = 2/284 (0%) Query: 23 LNYNTCRLTMDCLRSVYDSETNFVYEIILIDNNSRDDSVERISREFPGVMLIANSENVGY 82 +NYNTC+LT+DCLRSV+ SET + YE+ILIDNNS+D+SV+ I FP V LI N+EN G+ Sbjct: 8 VNYNTCQLTVDCLRSVFASETEYTYEVILIDNNSKDESVQTIRELFPQVKLIENTENTGF 67 Query: 83 ARANNQGMEVASGRYVLLLNSDTVVLKDTLQTMISFMDGRPDLGASGCKVILPDGSLDKA 142 A+ANNQGMEVA GRY+LLLNSDT++ +DT+QTM++FMD P +GASGCK++LPDGSLDKA Sbjct: 68 AKANNQGMEVAEGRYMLLLNSDTIIQQDTIQTMVAFMDYNPIIGASGCKIVLPDGSLDKA 127 Query: 143 CKRGFPTPSASFYYAFGFSKLFPDRPRFNGYQLGYLDPDQDYPVDCLVGAFMLLRRETIE 202 CKRGFPTPSASFYYAFG SKLFP++P FN YQLGYL+PD +YPVDCLVGAFML+RRETIE Sbjct: 128 CKRGFPTPSASFYYAFGLSKLFPNKPEFNQYQLGYLNPDVEYPVDCLVGAFMLVRRETIE 187 Query: 203 QVGGLDEDFFMYGEDLDWCFRIKEAGWGIYYYPQTSIIHLKGGSARRRPFKIVYEFHRAM 262 QVGGLDE FFMYGED+DWC+RIK+AGWGI+YYP+T+IIH KGGSARRRPFKI+YEFHRAM Sbjct: 188 QVGGLDETFFMYGEDIDWCYRIKQAGWGIHYYPRTTIIHYKGGSARRRPFKIIYEFHRAM 247 Query: 263 ILFHRKHYSKRYNSMINGAVYAGVGVKFALSLVRNAL--IRPRT 304 ILFHRKHY ++YN +NGAVYAGVG+K LSL+ N L IRP T Sbjct: 248 ILFHRKHYRQKYNIFVNGAVYAGVGLKLLLSLLTNRLKPIRPAT 291 >Q3MSA3.1 Q3MSA3_9BACL Glycosyltransferase/rhamnosyltransferase Length = 333 Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust. Identities = 200/304 (65%), Positives = 244/304 (80%), Gaps = 4/304 (1%) Query: 23 LNYNTCRLTMDCLRSVYDSETNFVYEIILIDNNSRDDSVERISREFPGVMLIANSENVGY 82 +NYNTC+LT+DCL+SVY S++ + Y +I+IDN+S D SVE I +P + LIAN +N G+ Sbjct: 8 VNYNTCQLTLDCLQSVYASKSQYRYXVIVIDNHSSDGSVEAIRAAYPDITLIANKDNTGF 67 Query: 83 ARANNQGMEVASGRYVLLLNSDTVVLKDTLQTMISFMDGRPDLGASGCKVILPDGSLDKA 142 A+ANNQGMEVASGRYVLLLNSDT+V DTL TMI FMD P++GASGCKVILPDGSLDKA Sbjct: 68 AKANNQGMEVASGRYVLLLNSDTLVQPDTLDTMIQFMDTHPEMGASGCKVILPDGSLDKA 127 Query: 143 CKRGFPTPSASFYYAFGFSKLFPDRPRFNGYQLGYLDPDQDYPVDCLVGAFMLLRRETIE 202 CKRGFPTPSASFYYAFG+SK +PD P++N YQLG+L P +D LVGAFML+RRETI+ Sbjct: 128 CKRGFPTPSASFYYAFGWSKRYPDNPKYNQYQLGHLSPTMSI-LDVLVGAFMLVRRETID 186 Query: 203 QVGGLDEDFFMYGEDLDWCFRIKEAGWGIYYYPQTSIIHLKGGSARRRPFKIVYEFHRAM 262 QVGGLDE FFMYGED+DWC RIK+AGWGIYYYP+T IIH+KGGSARRRP KI+YEFHRAM Sbjct: 187 QVGGLDETFFMYGEDIDWCXRIKQAGWGIYYYPRTYIIHIKGGSARRRPLKIIYEFHRAM 246 Query: 263 ILFHRKHYSKRYNSMINGAVYAGVGVKFALSLVRNALIRPRTAPSPAQTLTSTAEAGSRT 322 +FHRKHY ++Y+ + N AVYAG+ VKF ++ ++N L P S Q+ T E T Sbjct: 247 WVFHRKHYKQQYSWITNMAVYAGITVKFGMAFLKNKLSAPVKPDSGEQSRT---EGKHDT 303 Query: 323 ESNA 326 + +A Sbjct: 304 QKSA 307 >Q7BG45.1 Q7BG45_BACST WsaD Length = 289 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 161/277 (58%), Positives = 220/277 (79%) Query: 23 LNYNTCRLTMDCLRSVYDSETNFVYEIILIDNNSRDDSVERISREFPGVMLIANSENVGY 82 +NYNT +LT++ + S+ S+T + YEII++DN+S DDSV + +FP +++I N +NVG+ Sbjct: 8 VNYNTPKLTVEAIESILKSKTKYSYEIIVVDNHSSDDSVRILKGKFPNIVVIENKQNVGF 67 Query: 83 ARANNQGMEVASGRYVLLLNSDTVVLKDTLQTMISFMDGRPDLGASGCKVILPDGSLDKA 142 ++ANNQ ++++ GRY+LLLNSDT+V +DT++ MI FMD +GASGC+V+LP+G LD+A Sbjct: 68 SKANNQAIKLSKGRYILLLNSDTIVKEDTIEKMIEFMDKSKKVGASGCEVVLPNGELDRA 127 Query: 143 CKRGFPTPSASFYYAFGFSKLFPDRPRFNGYQLGYLDPDQDYPVDCLVGAFMLLRRETIE 202 C RGFPTP ASFYY G ++LFP RFN Y LGY++ ++ +P+DCLVGAFM++RRE IE Sbjct: 128 CHRGFPTPEASFYYLVGLARLFPRSRRFNQYHLGYMNLNEPHPIDCLVGAFMMVRREVIE 187 Query: 203 QVGGLDEDFFMYGEDLDWCFRIKEAGWGIYYYPQTSIIHLKGGSARRRPFKIVYEFHRAM 262 QVG LDE+FFMYGED+DWC+RIK+AGW IYY P TSIIH KG S++++PFKIVYEFHRAM Sbjct: 188 QVGLLDEEFFMYGEDIDWCYRIKQAGWEIYYCPFTSIIHYKGASSKKKPFKIVYEFHRAM 247 Query: 263 ILFHRKHYSKRYNSMINGAVYAGVGVKFALSLVRNAL 299 LFHRKHY+++Y ++N VY G+ KF LS + N Sbjct: 248 FLFHRKHYARKYPFIVNCLVYTGIAAKFILSAIINTF 284 >A2BD33.2 A2BD33_9BACI WsbD Length = 289 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 161/277 (58%), Positives = 218/277 (78%) Query: 23 LNYNTCRLTMDCLRSVYDSETNFVYEIILIDNNSRDDSVERISREFPGVMLIANSENVGY 82 +NYNT +LT+ + S+ S+T + YEII++DN+S D+SV I +FP V +I N +NVG+ Sbjct: 8 VNYNTPKLTVGAIESILKSKTKYSYEIIVVDNHSSDNSVHIIKGKFPNVAVIENKQNVGF 67 Query: 83 ARANNQGMEVASGRYVLLLNSDTVVLKDTLQTMISFMDGRPDLGASGCKVILPDGSLDKA 142 ++ANNQ ++++ GRY+LLLNSDT+V +DT++ MI FMD +GASGC+V+LP+G LD+A Sbjct: 68 SKANNQAIKLSKGRYILLLNSDTIVKEDTIEKMIEFMDKNKKVGASGCEVVLPNGELDRA 127 Query: 143 CKRGFPTPSASFYYAFGFSKLFPDRPRFNGYQLGYLDPDQDYPVDCLVGAFMLLRRETIE 202 C RGFPTP ASFYY G ++LFP PRFN Y LGY++ ++ +P+DCLVGAFM++RRE I+ Sbjct: 128 CHRGFPTPEASFYYLVGLARLFPKSPRFNQYHLGYMNLNEPHPIDCLVGAFMIVRREVIK 187 Query: 203 QVGGLDEDFFMYGEDLDWCFRIKEAGWGIYYYPQTSIIHLKGGSARRRPFKIVYEFHRAM 262 QVG LDE FFMYGED+DWC+RIK+AGW IYY P TSIIH KG S++++PFKIVYEFHRAM Sbjct: 188 QVGLLDEQFFMYGEDIDWCYRIKQAGWEIYYCPFTSIIHYKGASSKKKPFKIVYEFHRAM 247 Query: 263 ILFHRKHYSKRYNSMINGAVYAGVGVKFALSLVRNAL 299 LFH+KHY+++Y ++N VY G+ KF LS + N Sbjct: 248 FLFHKKHYARKYPFIVNYFVYMGIAAKFILSAIINTF 284 >B9MLL5.1 B9MLL5_ANATD Glycosyl transferase family 2 Length = 298 Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 141/293 (48%), Positives = 193/293 (65%), Gaps = 8/293 (2%) Query: 23 LNYNTCRLTMDCLRSVYDSETNFVYEIILIDNNSRDDSVERISREFPGVMLIANSENVGY 82 +NYNT L L S+Y + T +EII++DN S D S E + +EFP V+LI N +N+G+ Sbjct: 8 VNYNTRNLLRKTLESIYKNPTYREFEIIVVDNASSDGSQEMVKKEFPNVILIKNKQNLGF 67 Query: 83 ARANNQGMEVASGRYVLLLNSDTVVLKDTLQTMISFM--DGRPDLGASGCKVILPDGSLD 140 A+ANN G+ +A G+Y+LLLNSDT VL+ TL + I F+ D ++G GCKV+LPDG LD Sbjct: 68 AKANNIGIRIAKGKYILLLNSDTEVLRGTLDSCIDFLEKDEAKEIGILGCKVVLPDGKLD 127 Query: 141 KACKRGFPTPSASFYYAFGFSKLFPDRPRFNGYQLGYLDPDQDYPVDCLVGAFMLLRRET 200 AC+RGFPTP SF+ FG +KLFP F GY L YLD +Q Y VD +VGAFML+RRE Sbjct: 128 LACRRGFPTPKNSFFKIFGLAKLFPKSRFFAGYNLTYLDENQSYEVDSVVGAFMLIRREV 187 Query: 201 IEQVGGLDEDFFMYGEDLDWCFRIKEAGWGIYYYPQTSIIHLKGGSARRRPFKIVYEFHR 260 I+++G LDED+FM+GED+D+CFR K+ G+ +YYY IIH K GS R K++ F+ Sbjct: 188 IDKIGLLDEDYFMFGEDIDFCFRAKQNGFKVYYYADAKIIHHKRGSGRN--LKVLSAFYD 245 Query: 261 AMILFHRKHYSKRYNSMINGAVYAGV----GVKFALSLVRNALIRPRTAPSPA 309 +M +F++KHY RY + ++ + +K A + VRN IR P A Sbjct: 246 SMWIFYKKHYYNRYPKTLALLIFITIKLIKSLKLAHAKVRNFPIRKGKKPCIA 298 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.323 0.139 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,914,032,518 Number of extensions: 81295934 Number of successful extensions: 175442 Number of sequences better than 1.0e-05: 1235 Number of HSP's gapped: 175687 Number of HSP's successfully gapped: 1248 Length of query: 330 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 194 Effective length of database: 1,779,438,163 Effective search space: 345211003622 Effective search space used: 345211003622 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 131 (55.1 bits)