BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0555.0004.p (466 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K789.1 B3K789_9BACI Undecaprenyl-phosphate glucose phosphotran... 698 0.0 C1JZ08.1 C1JZ08_PAEAL UDP-Gal:phosphoryl-polyprenol Gal-1-phosph... 626 e-177 Q7BG44.1 Q7BG44_BACST Putative UDP-galactose-lipid carrier trans... 562 e-158 A2BD34.2 A2BD34_9BACI WsbP (Fragment) 559 e-157 B7DLY3.1 B7DLY3_9BACL Undecaprenyl-phosphate glucose phosphotran... 389 e-106 >B3K789.1 B3K789_9BACI Undecaprenyl-phosphate glucose phosphotransferase EC=2.7.8.6 Length = 466 Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/466 (73%), Positives = 390/466 (83%) Query: 1 MIRRNQRFLTQLYMVADFLVIQLAFLAAWWLKFRSGWLEYSETLPIESYAYWSFIYGGIA 60 MIR+NQ FLT+LYM+ DF IQLAFL AWW+KF SGW Y E LP+E+YA WS +YG +A Sbjct: 1 MIRQNQGFLTKLYMLTDFAFIQLAFLLAWWVKFESGWFPYEEPLPLETYALWSLVYGAVA 60 Query: 61 VLIGIVLSLYLPKRKKRFVDEFLKIFQVHIMAVFMLLGLMFFLKEIDVSRQYLAIYMGFN 120 V++GI+++LY PKRKKRF DEF+KIFQ+H + +F+LL +MFF+KE+D+SR YLAIYM FN Sbjct: 61 VVVGIMITLYSPKRKKRFADEFMKIFQMHFIGMFILLSIMFFVKEVDISRWYLAIYMIFN 120 Query: 121 VLSIMLYRYVLKKMLKSLREKGLNRQFVLILGAGTLGKRFYNNLVQYPELGYETIGFLDD 180 V I+LYRY LKK LK REKG NRQFVLI+GAG+LGKRF+ NL QYPELGYE IGFLDD Sbjct: 121 VAFIILYRYFLKKSLKHFREKGYNRQFVLIVGAGSLGKRFFKNLKQYPELGYEVIGFLDD 180 Query: 181 FHTWDDIEEQRYKPILGTVDELPGMLEMLPVDEVILALPLDAHSKYPAIIAACEKAGVRT 240 + WDDIE +R KPILG+V +L +L VDEV+LALPL+AH KYP IIAACEKAGVRT Sbjct: 181 YQQWDDIEARRLKPILGSVGDLHKVLNEKLVDEVVLALPLNAHHKYPEIIAACEKAGVRT 240 Query: 241 LIIPDFFDYLPARPYFDNFAGMPMINVRDIPLDMTGNKLAKRXXXXXXXXXXXXXXXPVM 300 LIIPDFFDYLPARP FDNFAGMPMINVRDIPLD+ N+L KR PVM Sbjct: 241 LIIPDFFDYLPARPVFDNFAGMPMINVRDIPLDLAANRLFKRAFDIVFSLVAIILTLPVM 300 Query: 301 LLVALGVRLTSPGPVIFKQERVGLNRRNFMMYKFRSMKMQQEGVEDTGWSTPVDPRRTKF 360 + + LGVRLTS GPVIFKQERVGLNRRNF MYKFRSMK+ EG DTGW+ DPRRTKF Sbjct: 301 IGIYLGVRLTSRGPVIFKQERVGLNRRNFYMYKFRSMKLLPEGAPDTGWTVENDPRRTKF 360 Query: 361 GTFIRRTSLDELPQFFNVLFGQMSVVGPRPERPYFVEQFRGEIPKYMVKHHVRPGITGWA 420 G+F+R+TSLDELPQFFNVLFG MSVVGPRPERPY+VEQF+ EIPKYMVKHHVRPGITGWA Sbjct: 361 GSFLRKTSLDELPQFFNVLFGHMSVVGPRPERPYYVEQFKEEIPKYMVKHHVRPGITGWA 420 Query: 421 QSNGLRGDTSIEERIKHDIFYIENWSLLFDIRIIFKTIRNGFKNAY 466 QSNGLRGDTSIEERIKHDIFYIENWS+LFDI+II +TIRNGFKNAY Sbjct: 421 QSNGLRGDTSIEERIKHDIFYIENWSILFDIKIILRTIRNGFKNAY 466 >C1JZ08.1 C1JZ08_PAEAL UDP-Gal:phosphoryl-polyprenol Gal-1-phosphate transferase Length = 468 Score = 626 bits (1615), Expect = e-177, Method: Compositional matrix adjust. Identities = 306/468 (65%), Positives = 371/468 (79%), Gaps = 2/468 (0%) Query: 1 MIRRNQRFLTQLYMVADFLVIQLAFLAAWWLKFRSGWLEYSETLPIESYAYWSFIYGGIA 60 MIR+NQRFL+++YM+ D + + LAF AW LKF S WL+ LP +Y W +Y G+ Sbjct: 1 MIRKNQRFLSKIYMIFDVITMMLAFGIAWILKFMSNWLDNDTPLPFSTYVGWGAVYAGVV 60 Query: 61 VLIGIVLSLYLPKRKKRFVDEFLKIFQVHIMAVFMLLGLMFFLKEIDVSRQYLAIYMGFN 120 ++IG + SLY RKKRF D+ ++I Q HI+++F+LLGL+FF K+I +SR++LAI++ + Sbjct: 61 LVIGAMSSLYHFHRKKRFADQLIRIIQTHIISMFILLGLLFFFKQIHISREFLAIFVSAS 120 Query: 121 VLSIMLYRYVLKKMLKSLREKGLNRQFVLILGAGTLGKRFYNNLVQYPELGYETIGFLDD 180 L + YRY +K ML+S+R+KG N+QF+LILGAGTLGKRFY NL YPELGYE IGFLDD Sbjct: 121 TLCTIFYRYSVKVMLRSIRQKGYNKQFILILGAGTLGKRFYENLRNYPELGYEVIGFLDD 180 Query: 181 FHTWDDIEEQRYKPILGTVDELPGMLEMLPVDEVILALPLDAHSKYPAIIAACEKAGVRT 240 W +E + +KPILG + +L +L +DEVILALPLDAH K+P II +CEKAGVRT Sbjct: 181 NAEWKTLESKSFKPILGALSDLEQILGDRLIDEVILALPLDAHHKFPNIIDSCEKAGVRT 240 Query: 241 LIIPDFFDYLPARPYFDNFAGMPMINVRDIPLDMTGNKLAKRXXXXXXXXXXXXXXXPVM 300 LIIPDFFDYLP+RPYFDNFAGMPMINVRDIPLD+ N++ KR PVM Sbjct: 241 LIIPDFFDYLPSRPYFDNFAGMPMINVRDIPLDVLRNRVFKRAFDIAFSLIAIILTFPVM 300 Query: 301 LLVALGVRLTSPGPVIFKQERVGLNRRNFMMYKFRSMKMQQEGVEDTGWSTPVDPRRTKF 360 L + +G++LTSPG VIFKQERVGLNRRNFMMYKFRSMK+ E DT W+T DPRRTKF Sbjct: 301 LFIVIGIKLTSPGSVIFKQERVGLNRRNFMMYKFRSMKLSSEKTSDTVWTTENDPRRTKF 360 Query: 361 GTFIRRTSLDELPQFFNVLFGQMSVVGPRPERPYFVEQFRGEIPKYMVKHHVRPGITGWA 420 G+F+R+TSLDELPQFFNVLFG MS+VGPRPERP+FVEQF+ EIPKYMVKHHVRPGITGWA Sbjct: 361 GSFLRKTSLDELPQFFNVLFGHMSIVGPRPERPFFVEQFKEEIPKYMVKHHVRPGITGWA 420 Query: 421 QSNGLRGDTSIEERIKHDIFYIENWSLLFDIRIIFKTIRNGF--KNAY 466 QSNGLRGDTSIEERI++DIFYIENWSLLFDI+II+KTI NGF KNAY Sbjct: 421 QSNGLRGDTSIEERIRYDIFYIENWSLLFDIKIIWKTIWNGFINKNAY 468 >Q7BG44.1 Q7BG44_BACST Putative UDP-galactose-lipid carrier transferase Length = 471 Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust. Identities = 266/468 (56%), Positives = 346/468 (73%), Gaps = 2/468 (0%) Query: 1 MIRRNQRFLTQLYMVADFLVIQLAFLAAWWLKFRSGWLEYSETLPIESYAYWSFIYGGIA 60 +IR +RFLT+LY DF ++Q AF AW LKF+ LP+E Y +WSF+YG IA Sbjct: 4 VIRGRERFLTKLYAFVDFAMMQGAFFLAWVLKFKVFHNGVGGHLPLEDYLFWSFVYGAIA 63 Query: 61 VLIGIVLSLYLPKRKKRFVDEFLKIFQVHIMAVFMLLGLMFFLKEIDVSRQYLAIYMGFN 120 ++IG ++ LY PKRK++F +E K+ QVH +++F+LL ++F K +DVSR +L +Y +N Sbjct: 64 IVIGYLVELYAPKRKEKFSNELAKVLQVHTLSMFVLLSVLFTFKTVDVSRSFLLLYFAWN 123 Query: 121 VLSIMLYRYVLKKMLKSLREKGLNRQFVLILGAGTLGKRFYNNLVQYPELGYETIGFLDD 180 ++ + +YRY++K+ L++LR+KG N+QFVLI+GAG++G++++ NL +PE G E +GFLDD Sbjct: 124 LILVSIYRYIVKQSLRTLRKKGYNKQFVLIIGAGSIGRKYFENLQMHPEFGLEVVGFLDD 183 Query: 181 FHTWDDIEEQRYKPILGTVDELPGMLEMLPVDEVILALPLDAHSKYPAIIAACEKAGVRT 240 F T E YKPI+G +L +L +DEVI+ALPL A+ KY IIA CEK GVR Sbjct: 184 FRTKHAPEFAHYKPIIGQTADLEHVLSHQLIDEVIVALPLQAYPKYREIIAVCEKMGVRV 243 Query: 241 LIIPDFFDYLPARPYFDNFAGMPMINVRDIPLDMTGNKLAKRXXXXXXXXXXXXXXXPVM 300 IIPDF+D LPA P+F+ F +P+INVRD+PLD N++ KR P+M Sbjct: 244 SIIPDFYDILPAAPHFEIFGDLPIINVRDVPLDELRNRVLKRSFDIVFSLVAIIVTSPIM 303 Query: 301 LLVALGVRLTSPGPVIFKQERVGLNRRNFMMYKFRSMKMQQEGVEDTGWSTPVDPRRTKF 360 LL+A+G++LTSPGP+IFKQERVGLNRR F MYKFRSMK + V DT W+ DPRRTKF Sbjct: 304 LLIAIGIKLTSPGPIIFKQERVGLNRRTFYMYKFRSMKPMPQSVSDTQWTVESDPRRTKF 363 Query: 361 GTFIRRTSLDELPQFFNVLFGQMSVVGPRPERPYFVEQFRGEIPKYMVKHHVRPGITGWA 420 G F+R+TSLDELPQFFNVL G MS+VGPRPERP+FVE+F+ EIPKYM+KHHVRPGITGWA Sbjct: 364 GAFLRKTSLDELPQFFNVLKGDMSIVGPRPERPFFVEKFKKEIPKYMIKHHVRPGITGWA 423 Query: 421 QSNGLRGDTSIEERIKHDIFYIENWSLLFDIRIIFKTIRNGF--KNAY 466 Q GLRGDTSI+ERI+HD+FYIENWSL DI+II TI NG KNAY Sbjct: 424 QVCGLRGDTSIQERIEHDLFYIENWSLWLDIKIILLTITNGLVNKNAY 471 >A2BD34.2 A2BD34_9BACI WsbP (Fragment) Length = 464 Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust. Identities = 268/460 (58%), Positives = 340/460 (73%) Query: 2 IRRNQRFLTQLYMVADFLVIQLAFLAAWWLKFRSGWLEYSETLPIESYAYWSFIYGGIAV 61 IR +RFLT+LY DF ++Q AF AW LKF+ LP+E Y +WSF+YG IA+ Sbjct: 5 IRGRERFLTKLYAFVDFAMMQGAFFLAWVLKFKVFHDGVGGHLPLEDYWFWSFVYGAIAI 64 Query: 62 LIGIVLSLYLPKRKKRFVDEFLKIFQVHIMAVFMLLGLMFFLKEIDVSRQYLAIYMGFNV 121 +IG ++ LY PKRK++F +E K+ QVH +++F+LL ++F K +DVSR +L +Y +N+ Sbjct: 65 VIGYLVELYAPKRKEKFSNELAKVLQVHTLSMFILLSVLFTFKTVDVSRSFLLLYFAWNL 124 Query: 122 LSIMLYRYVLKKMLKSLREKGLNRQFVLILGAGTLGKRFYNNLVQYPELGYETIGFLDDF 181 +YRYV+K+ L+ LR+K N+QFVLI+GAG++G++++ NL +PE G E +GFLDDF Sbjct: 125 TLASIYRYVVKQSLRKLRKKWYNKQFVLIIGAGSIGRKYFENLQMHPEYGLEVVGFLDDF 184 Query: 182 HTWDDIEEQRYKPILGTVDELPGMLEMLPVDEVILALPLDAHSKYPAIIAACEKAGVRTL 241 T E YKPI+G +L +L +DEVI+ALPL A+ KY IIA CEK GVR Sbjct: 185 RTKHAPEFAHYKPIIGQTADLEHVLSHQLIDEVIVALPLQAYPKYREIIAVCEKMGVRVS 244 Query: 242 IIPDFFDYLPARPYFDNFAGMPMINVRDIPLDMTGNKLAKRXXXXXXXXXXXXXXXPVML 301 IIPDF+D LPA P+F+ F +P+INVRD+PLD N++ KR P+ML Sbjct: 245 IIPDFYDMLPAVPHFEIFGDLPIINVRDVPLDELRNRILKRSFDVVFSLVAIIVTSPIML 304 Query: 302 LVALGVRLTSPGPVIFKQERVGLNRRNFMMYKFRSMKMQQEGVEDTGWSTPVDPRRTKFG 361 L+A+G++LTSPGP+IFKQERVGLNRR F MYKFRSMK + V DT W+ DPRRTKFG Sbjct: 305 LIAIGIKLTSPGPIIFKQERVGLNRRTFYMYKFRSMKHLPQSVSDTQWTVENDPRRTKFG 364 Query: 362 TFIRRTSLDELPQFFNVLFGQMSVVGPRPERPYFVEQFRGEIPKYMVKHHVRPGITGWAQ 421 F+R+TSLDELPQFFNVL G MSVVGPRPERPYFVE+F+ EIPKYM+KHHVRPGITGWAQ Sbjct: 365 AFLRKTSLDELPQFFNVLKGDMSVVGPRPERPYFVEKFKEEIPKYMIKHHVRPGITGWAQ 424 Query: 422 SNGLRGDTSIEERIKHDIFYIENWSLLFDIRIIFKTIRNG 461 GLRGDTSI+ RI+HDIFYIENWSLLFDI+IIFKTI NG Sbjct: 425 VCGLRGDTSIKARIEHDIFYIENWSLLFDIKIIFKTISNG 464 >B7DLY3.1 B7DLY3_9BACL Undecaprenyl-phosphate glucose phosphotransferase EC=2.7.8.6 Length = 477 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 211/480 (43%), Positives = 299/480 (62%), Gaps = 17/480 (3%) Query: 1 MIRRNQRFLTQLYMVADFLVIQLAFLAAWWLKFRSGWLEYSETLPIESYAYWSFIYGGIA 60 M R Q ++++ D ++ ++FL AWWLKF SGW+ ++ LP+ Y I + Sbjct: 1 MFRTYQELFRRIFIATDAAIVVVSFLLAWWLKFDSGWIPHAGHLPLLYYRGPLLIAVIVF 60 Query: 61 VLIGIVLSLYLPKRKKRFVDEFLKIFQVHIMAVFMLLGLMFFLKEIDVSRQYLAIYMGFN 120 VL V LY P R K E + + I+ +L+ ++F K + SR +A++ G N Sbjct: 61 VLANGVARLYEPMRAKSLFYEAYSVAKGVILGTIVLMAALYFAKMQEFSRDVIALFAGTN 120 Query: 121 VLSIMLYRYVLKKMLKSLREKGLNRQFVLILGAGTLGKRFYNNLVQYPELGYETIGFLDD 180 ++ R V++ +L+SLR +GLN++F+LI+G +RF L P GY IG+L Sbjct: 121 FGLMVGERIVVRSVLRSLRRRGLNQRFLLIVGWSAATRRFLEALEAQPWFGYRVIGYLR- 179 Query: 181 FHTWDDIEEQRYKPILGTVDELPGMLEMLPVDEVILALPLDAHSKYPAIIAACEKAGVRT 240 + DD P +G VD++ G+LE VD+V++A P D +I+ACE GV++ Sbjct: 180 -YEGDDASRATV-PCIGAVDDIRGVLEEHLVDQVVIAAPRDRVGDLAEVISACEAVGVQS 237 Query: 241 LIIPDFFDYLPARPYFDNFAGMPMINVRDIPLDMTGNKLAKRXXXXXXXXXXXXXXXPVM 300 LI+PD+FD LPARP F+ F +P+I+ R +PLD N KR P++ Sbjct: 238 LILPDYFDLLPARPRFETFGDVPLIDTRHVPLDDAVNAFLKRAFDIVFSLVVLIGLSPLL 297 Query: 301 LLVALGVRLTSPGPVIFKQERVGLNRRNFMMYKFRSM-------KMQQEGVEDT-----G 348 + +A+ V+L+SPGPV++ QERVG NRR F MYKFR+M + +++ E+ G Sbjct: 298 VAIAIAVKLSSPGPVLYVQERVGKNRRTFKMYKFRTMYWDPGADRAERDCAEEADLRSAG 357 Query: 349 WSTPVDPRRTKFGTFIRRTSLDELPQFFNVLFGQMSVVGPRPERPYFVEQFRGEIPKYMV 408 W+ DPRRT+ G F+RRTSLDELPQF+NVL G MSV+GPRPERP FVE+FR E+P+YMV Sbjct: 358 WTVKGDPRRTRVGAFLRRTSLDELPQFWNVLKGDMSVIGPRPERPVFVERFREEVPRYMV 417 Query: 409 KHHVRPGITGWAQSNGLRGDTSIEERIKHDIFYIENWSLLFDIRIIFKTIRNGF--KNAY 466 KH VRPGITGWAQ +G RGDTSI ERI+ DI YIENWS D++I++KTI++GF +NAY Sbjct: 418 KHRVRPGITGWAQVHGWRGDTSIAERIRLDIEYIENWSFWLDLKIVWKTIKDGFVNENAY 477 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.328 0.145 0.448 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,763,885,719 Number of extensions: 119837582 Number of successful extensions: 383074 Number of sequences better than 1.0e-05: 2695 Number of HSP's gapped: 376674 Number of HSP's successfully gapped: 2701 Length of query: 466 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 327 Effective length of database: 1,751,175,118 Effective search space: 572634263586 Effective search space used: 572634263586 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 133 (55.8 bits)