BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0554.0016.p
         (170 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A8MJI6.1 A8MJI6_ALKOO Putative uncharacterized protein                135   1e-30
Q6LZS5.1 Q6LZS5_METMP Putative uncharacterized protein                112   1e-23
A6TNY9.1 A6TNY9_ALKMQ Putative uncharacterized protein                103   7e-21
Q6AMY7.1 Q6AMY7_DESPS Putative uncharacterized protein                103   7e-21
B1L0N8.1 B1L0N8_CLOBM Putative uncharacterized protein                102   8e-21

>A8MJI6.1 A8MJI6_ALKOO Putative uncharacterized protein
          Length = 161

 Score =  135 bits (339), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/135 (46%), Positives = 86/135 (63%), Gaps = 2/135 (1%)

Query: 3   RSKKIIVASHCVINQNAVVEGEARSPGVMKAAVDWTYEQGYGLFQLPCPEFTFLGPERPP 62
           R KKII  +HCV+NQNAV+    R+ G   + +    ++   + QLPCPEFTFLG  RPP
Sbjct: 3   RRKKIIYTAHCVLNQNAVIRDWERAQGAFNSILKVLLDKNISIVQLPCPEFTFLGESRPP 62

Query: 63  MTVEEYDTPEFRSHNRSILQPVVEQLKTYQDHGYSIVGGLGISGSPSCDP--GKGVFMRD 120
           MT +EYDT E+RS  R +   VV Q+K Y ++ Y I+G LGI GSPSCD    KGVF+ +
Sbjct: 63  MTKKEYDTLEYRSICRKLATGVVHQMKEYLNNSYEIIGLLGIGGSPSCDTLGEKGVFIEE 122

Query: 121 FLELAAENGVAIDFF 135
            + L +   + +D+F
Sbjct: 123 LVNLMSAENIHLDYF 137


>Q6LZS5.1 Q6LZS5_METMP Putative uncharacterized protein
          Length = 182

 Score =  112 bits (279), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 88/161 (54%), Gaps = 29/161 (18%)

Query: 1   VQRSKKIIVASHCVINQNAVVEGEARSPGVMKAAVDWTYEQGYGLFQLPCPEFTFLGPER 60
           ++R+KKI + SHC++N N+ VEG +   G++K  +++  ++GYG+ Q+PCPE    G +R
Sbjct: 1   MKRNKKIALVSHCILNANSKVEGLSEYGGMLKDVMNYLMDEGYGIIQMPCPEMAIYGIKR 60

Query: 61  PPMTVEEYDTPEFRSHNRSILQPVVEQLKTYQDHGYSIVGGLGISGSPSCD--------- 111
                E++DTP FR  +R + QP++EQ++ Y  +GY +   +GI  SPSC          
Sbjct: 61  WGHVKEQFDTPHFRKVSRKLFQPILEQVQDYIKNGYEVSLLIGIDKSPSCGINETCSSNE 120

Query: 112 --------------------PGKGVFMRDFLELAAENGVAI 132
                               P KG+FM + L++  EN +AI
Sbjct: 121 WGGYSSNGNMAEKSEKLEMIPEKGIFMDEILKILNENEIAI 161


>A6TNY9.1 A6TNY9_ALKMQ Putative uncharacterized protein
          Length = 183

 Score =  103 bits (256), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 70/110 (63%)

Query: 1   VQRSKKIIVASHCVINQNAVVEGEARSPGVMKAAVDWTYEQGYGLFQLPCPEFTFLGPER 60
           ++RSKK+++  HC++N N  VEG A++ G+ K  V+   E   G+ QLPCPEF   G +R
Sbjct: 1   MERSKKVVLLCHCILNSNTKVEGLAKNNGIGKGIVNLLIENEIGMIQLPCPEFMCYGLKR 60

Query: 61  PPMTVEEYDTPEFRSHNRSILQPVVEQLKTYQDHGYSIVGGLGISGSPSC 110
                 ++DTP FR + + + +P  +Q+  Y  +GY ++G +GI+GSP+C
Sbjct: 61  WGHVKSQFDTPHFRKNCKMMFEPYADQITDYISNGYEVLGVMGINGSPTC 110


>Q6AMY7.1 Q6AMY7_DESPS Putative uncharacterized protein
          Length = 173

 Score =  103 bits (256), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 67/110 (60%)

Query: 1   VQRSKKIIVASHCVINQNAVVEGEARSPGVMKAAVDWTYEQGYGLFQLPCPEFTFLGPER 60
           + RSKKII+  HC++N NA +   A   GV K+ V      G GL QLPCPE  +LG  R
Sbjct: 1   MNRSKKIIILCHCLLNSNAKITPLATCGGVYKSVVAQYIADGVGLVQLPCPESGYLGQNR 60

Query: 61  PPMTVEEYDTPEFRSHNRSILQPVVEQLKTYQDHGYSIVGGLGISGSPSC 110
             MT ++Y+T  FR + R IL P + Q+K + D GY I G +G+ GSP+C
Sbjct: 61  WGMTRDQYNTLHFRKYCREILAPSLNQIKAFVDAGYEIQGVIGMDGSPNC 110


>B1L0N8.1 B1L0N8_CLOBM Putative uncharacterized protein
          Length = 182

 Score =  102 bits (255), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 46/110 (41%), Positives = 71/110 (64%)

Query: 1   VQRSKKIIVASHCVINQNAVVEGEARSPGVMKAAVDWTYEQGYGLFQLPCPEFTFLGPER 60
           ++RSKKI++ SHC++N N+ VEG A+        V +  E  +G+ QLPCPE +F G  R
Sbjct: 1   MRRSKKIVLISHCILNVNSKVEGLAQYENNSLELVKYLIENKFGIIQLPCPEASFYGMRR 60

Query: 61  PPMTVEEYDTPEFRSHNRSILQPVVEQLKTYQDHGYSIVGGLGISGSPSC 110
                E++DTP +R H++ I  P+++Q++ Y ++GY I   +GI GSPSC
Sbjct: 61  WGHVKEQFDTPYYREHSQKIFYPILQQVEDYINNGYEIKCIIGIDGSPSC 110


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.316    0.136    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,166,463,266
Number of extensions: 50852243
Number of successful extensions: 98507
Number of sequences better than 1.0e-05: 46
Number of HSP's gapped: 98483
Number of HSP's successfully gapped: 46
Length of query: 170
Length of database: 3,060,696,203
Length adjustment: 126
Effective length of query: 44
Effective length of database: 1,873,648,313
Effective search space: 82440525772
Effective search space used: 82440525772
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 126 (53.1 bits)