BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0553.0010.p
         (109 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K7W9.1 B3K7W9_9BACI Antibiotic biosynthesis monooxygenase           122   8e-27
B1DK08.1 B1DK08_9BACL Antibiotic biosynthesis monooxygenase            94   4e-18
B7GLW7.1 B7GLW7_ANOFW Uncharacterized enzyme involved in biosynt...    89   2e-16
C2LXA9.1 C2LXA9_STAHO Heme-degrading monooxygenase IsdG EC=1.14....    77   5e-13
C2VHN9.1 C2VHN9_BACCE Heme-degrading monooxygenase isdG                75   2e-12

>B3K7W9.1 B3K7W9_9BACI Antibiotic biosynthesis monooxygenase
          Length = 101

 Score =  122 bits (307), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 65/99 (65%), Positives = 78/99 (78%), Gaps = 2/99 (2%)

Query: 7   MLVVTNTLKIKEGHAEAIAQRFGASNGVQDMPGFVRMEVWH-GSPKDGAEELKICTVWEN 65
           MLVVTN++K+K G  + IAQRF  + GVQ++ GFVRMEVWH       AEELKI TVWE+
Sbjct: 1   MLVVTNSIKVKPGFGQEIAQRFTEAKGVQEIEGFVRMEVWHEAKEGAEAEELKISTVWED 60

Query: 66  EEAFKGWTSSDAFRQSHRGAGGNEAILGATLDKYELLVS 104
           EEAFK WTSS++FRQSH G G NE ILGA+L+KYELL+S
Sbjct: 61  EEAFKRWTSSESFRQSH-GQGRNENILGASLNKYELLIS 98


>B1DK08.1 B1DK08_9BACL Antibiotic biosynthesis monooxygenase
          Length = 118

 Score = 93.6 bits (231), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 13/112 (11%)

Query: 7   MLVVTNTLKIKEGHAEAIAQRFGASNGVQDMPGFVRMEVWHGSPKDGAEELKICTVWENE 66
           M+VVTNT+K+K+GH E +A+RF  + G++   GF+RMEV         +ELK+ T WE +
Sbjct: 1   MIVVTNTIKVKKGHGEEVAERFQKTKGIEQSAGFIRMEVMLTEGLADYDELKVSTTWETK 60

Query: 67  EAFKGWTSSDAFRQSHRGAGGNEA-------------ILGATLDKYELLVSR 105
            +F+GW +SD+FRQ+H   G  +A             +LG+ L  + +LVSR
Sbjct: 61  ASFEGWVNSDSFRQAHAHRGNKQADGGKGKDGEGERIMLGSQLTTHRILVSR 112


>B7GLW7.1 B7GLW7_ANOFW Uncharacterized enzyme involved in biosynthesis of
           extracellular polysaccharides
          Length = 103

 Score = 88.6 bits (218), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 67/100 (67%), Gaps = 2/100 (2%)

Query: 7   MLVVTNTLKIKEGHAEAIAQRFGASNGVQDMPGFVRMEVWHGSPKDGAEELKICTVWENE 66
           M VVTN +++K+G+A+ + +RF    G++  PGF+R+E+      +  +E+++CT WEN+
Sbjct: 1   MYVVTNAIRVKKGYAQQLVERFKERKGIEQSPGFIRLELHVTQGLEDHDEVRVCTTWENK 60

Query: 67  EAFKGWTSSDAFRQSHRGAGGN--EAILGATLDKYELLVS 104
           E+F+ WT S+AFR++H+    +  + +LG  +  YE+ +S
Sbjct: 61  ESFEAWTQSEAFRKAHQQKAKDRPDYVLGNEMFSYEVALS 100


>C2LXA9.1 C2LXA9_STAHO Heme-degrading monooxygenase IsdG EC=1.14.99.3
          Length = 104

 Score = 77.0 bits (188), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 51/80 (63%)

Query: 7  MLVVTNTLKIKEGHAEAIAQRFGASNGVQDMPGFVRMEVWHGSPKDGAEELKICTVWENE 66
          M VVTN + +K+G AE +A RF     ++ + GF ++EVW     +  E++ + T W++E
Sbjct: 1  MFVVTNRITVKKGFAEKMAPRFTKGGKIEQLEGFRKIEVWQIDNTNDTEDMYVNTWWDSE 60

Query: 67 EAFKGWTSSDAFRQSHRGAG 86
          E FK WT SDAF+++H+  G
Sbjct: 61 ENFKAWTQSDAFKEAHKNTG 80


>C2VHN9.1 C2VHN9_BACCE Heme-degrading monooxygenase isdG
          Length = 107

 Score = 75.1 bits (183), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 1/102 (0%)

Query: 7   MLVVTNTLKIKEGHAEAIAQRFGASNGVQDMPGFVRMEVWHGSPKDGAEELKICTVWENE 66
           M++VTNT KI +G+   + +RF     V+ MPGF+ +EV         +E+ I T W  +
Sbjct: 1   MIIVTNTAKITKGNGHKLIERFNKVGKVETMPGFLGLEVLLTQNTVDYDEVTISTRWNAK 60

Query: 67  EAFKGWTSSDAFRQSHRGAGG-NEAILGATLDKYELLVSRTP 107
           E F+GWT S AF+ +H   GG  E IL   +  Y++ V R P
Sbjct: 61  EDFQGWTKSSAFKDAHSHQGGMPEYILDNKIAYYDVKVVRMP 102


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.315    0.132    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 703,394,000
Number of extensions: 26843910
Number of successful extensions: 56787
Number of sequences better than 1.0e-05: 249
Number of HSP's gapped: 56860
Number of HSP's successfully gapped: 249
Length of query: 109
Length of database: 3,060,696,203
Length adjustment: 77
Effective length of query: 32
Effective length of database: 2,335,278,048
Effective search space: 74728897536
Effective search space used: 74728897536
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 125 (52.8 bits)