BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0553.0004.p (210 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K7S0.1 B3K7S0_9BACI Putative uncharacterized protein 273 1e-71 B3KCG5.1 B3KCG5_9BACI Putative uncharacterized protein 171 3e-41 B9JDE7.1 B9JDE7_AGRRK Putative uncharacterized protein 66 2e-09 B5I967.1 B5I967_9ACTO Putative uncharacterized protein 65 3e-09 A7VFU0.1 A7VFU0_9CLOT Putative uncharacterized protein 64 6e-09 >B3K7S0.1 B3K7S0_9BACI Putative uncharacterized protein Length = 212 Score = 273 bits (697), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 130/211 (61%), Positives = 155/211 (73%), Gaps = 2/211 (0%) Query: 1 MDKRKCLLLGDYTHPRFHPLQGVDKQISEILNDLLIVQCSENKKLLLSEHLSGYDLCIAY 60 MDKRK LLLG YTHP+FHPLQG+DKQI+ +LND+ VQC+EN K+L +L Y+LCIAY Sbjct: 1 MDKRKALLLGSYTHPKFHPLQGIDKQITHLLNDMFTVQCTENHKMLHESNLYPYELCIAY 60 Query: 61 NELWNETVSPQQTAXXXXXXXXXXXXXXXHTGISLAKRYELAHLIGGRFTGHPPYTPLNF 120 ++LW+E VSP+QTA H G++LA RYELA LIG RF GHPP L F Sbjct: 61 SDLWDERVSPRQTAGLLSYVSGGGGLLVIHNGVTLANRYELAQLIGARFDGHPPMEKLYF 120 Query: 121 KVLE--HDITEGIEDFQLDEEPYTFDFDPFTEKTILLEYEAEGEMRPAAWCHSYGLGRVV 178 E HDITEG+E F LDEEPY F F PFTEKT+LL Y+ EG+ PAAWCH+YG+GRVV Sbjct: 121 VPGETDHDITEGVEPFVLDEEPYRFVFSPFTEKTVLLHYDYEGKQWPAAWCHTYGIGRVV 180 Query: 179 FLMPGHHEPSFTHPAIRQLILRAATWAARIP 209 FLMPGHHEPSF P +R +I +AA WAAR+P Sbjct: 181 FLMPGHHEPSFLQPQLRLMITQAAKWAARVP 211 >B3KCG5.1 B3KCG5_9BACI Putative uncharacterized protein Length = 210 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 83/205 (40%), Positives = 115/205 (56%), Gaps = 2/205 (0%) Query: 5 KCLLLGDYTHPRFHPLQGVDKQISEILNDLLIVQCSENKKLLLSEHLSGYDLCIAYNELW 64 K + LG Y ++HP + +D+++ I + V+C+++ +L + L GYDL I+Y E Sbjct: 2 KAIALGQYEGAKYHPFKQIDRELQTIFEPAMDVECTDDYAVLQKDKLEGYDLFISYAEFS 61 Query: 65 NETVSPQQTAXXXXXXXXXXXXXXXHTGISLAKRYELAHLIGGRFTGHPPYT--PLNFKV 122 + + Q H GISL + EL LIGGRFTGHP YT P+ ++ Sbjct: 62 DGEMPENQVQALISYVRNGGGLLVIHNGISLQRSTELEKLIGGRFTGHPAYTSLPVRYQS 121 Query: 123 LEHDITEGIEDFQLDEEPYTFDFDPFTEKTILLEYEAEGEMRPAAWCHSYGLGRVVFLMP 182 H I E + DF +DEEPY F+ P + EYE +G+ PAAW H YG GRVV+LMP Sbjct: 122 GSHPIVESLTDFTIDEEPYRFELSPHETTVVFAEYEHDGQRWPAAWAHPYGSGRVVYLMP 181 Query: 183 GHHEPSFTHPAIRQLILRAATWAAR 207 GHH PSF ++R LI + WAAR Sbjct: 182 GHHLPSFRIESVRHLIRESGLWAAR 206 >B9JDE7.1 B9JDE7_AGRRK Putative uncharacterized protein Length = 213 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 53/126 (42%), Gaps = 9/126 (7%) Query: 91 TGISLAKRYELAHLIGGRFTGHPP-YTPLNFKVLEHD--ITEGIEDFQLDEEPYTFDFDP 147 G S + E +IGG++ HP + HD I EGI DF E Y DP Sbjct: 88 AGDSFRESVEYQFIIGGQWVAHPGNIIDYTVNITRHDDPIMEGITDFPYTSEQYYMHVDP 147 Query: 148 FTEKTILL------EYEAEGEMRPAAWCHSYGLGRVVFLMPGHHEPSFTHPAIRQLILRA 201 E Y +G + P AW YG GRV + GH F+ P ++ + R Sbjct: 148 SNEVLATTTFTGDHAYWIDGVVMPVAWKRKYGKGRVFYSSLGHQAKEFSVPQMKTIFRRG 207 Query: 202 ATWAAR 207 A WAAR Sbjct: 208 ANWAAR 213 >B5I967.1 B5I967_9ACTO Putative uncharacterized protein Length = 233 Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 68/177 (38%), Gaps = 31/177 (17%) Query: 57 CIAYNELWNETVSPQQTAXXXXXXXXXXXXXXXHTGI--SLAKRYELAHLIGGRFTGHPP 114 C+ +E ++ +QT+ H GI S + HL+GG+F HP Sbjct: 60 CVTMSE-----ITGEQTSGLSAAVAAGTGLTGWHGGIADSFRASSDYLHLVGGQFATHPG 114 Query: 115 YTP---------------LNFKVL--EHDITEGIEDFQLDEEPYTFDFDPFTEKTILLEY 157 P + F L EH +T GIEDF+L E Y D + + Sbjct: 115 KEPCERRGGEEDNFLPHTVTFTDLGREHPVTAGIEDFELLTEQYWVLHDDLIDVLATTTH 174 Query: 158 EAEG-------EMRPAAWCHSYGLGRVVFLMPGHHEPSFTHPAIRQLILRAATWAAR 207 A PA W +G GR+V PGH HPA+R +I R WA R Sbjct: 175 PARPWQPWHRPVTSPAVWARQWGAGRIVVTTPGHSLDVLEHPAVRTVIERGMLWATR 231 >A7VFU0.1 A7VFU0_9CLOT Putative uncharacterized protein Length = 142 Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 3/108 (2%) Query: 101 LAHLIGGRFTGHPPYTPLNFK-VLEHDITEGIEDFQLDE--EPYTFDFDPFTEKTILLEY 157 L +++ F HP PL K + EH I EGI F + E Y P + TIL E Sbjct: 35 LTNVVRSNFITHPEQCPLTVKPIAEHPIIEGIGKFTFPDFDEHYVMKMIPNADTTILAET 94 Query: 158 EAEGEMRPAAWCHSYGLGRVVFLMPGHHEPSFTHPAIRQLILRAATWA 205 ++ ++PA W H+YG G++ ++P H + T +L+ A W Sbjct: 95 VSKNGVQPAVWIHTYGKGKICCIVPAHTTQNLTCEPFVKLVKNAIDWV 142 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.140 0.442 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,297,046,559 Number of extensions: 50369509 Number of successful extensions: 86755 Number of sequences better than 1.0e-05: 50 Number of HSP's gapped: 86763 Number of HSP's successfully gapped: 50 Length of query: 210 Length of database: 3,060,696,203 Length adjustment: 130 Effective length of query: 80 Effective length of database: 1,835,964,253 Effective search space: 146877140240 Effective search space used: 146877140240 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 128 (53.9 bits)