BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0551.0003.p
         (133 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K476.1 B3K476_9BACI DoxX family protein                              87   5e-16
B1D6J7.1 B1D6J7_9BACL DoxX family protein                              86   9e-16
B7GJT1.1 B7GJT1_ANOFW Predicted membrane protein                       84   4e-15
A6CHK0.1 A6CHK0_9BACI Putative uncharacterized protein                 78   2e-13
B1DDK5.1 B1DDK5_9BACL DoxX family protein                              73   7e-12

>B3K476.1 B3K476_9BACI DoxX family protein
          Length = 134

 Score = 87.0 bits (214), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/118 (47%), Positives = 68/118 (57%)

Query: 16  AFIGHGSQKLFGWFGGYGPKGTGGWMESIGIKPGVLMAVMAGLMEXXXXXXXXXXXXTPX 75
           +F+ HG+QKLFGWFGGYGPKGTGGWMES+GIKPGV +AV++GLME            T  
Sbjct: 17  SFMAHGAQKLFGWFGGYGPKGTGGWMESVGIKPGVAIAVLSGLMELVGGLLLAAGFLTVL 76

Query: 76  XXXXXXXXXXXXXXKVHAPNGFWSTANGIEFPLTXXXXXXXXXXXXXXSISLDALLFN 133
                         KVH  NG+WSTANG E+ L               + SLDA++FN
Sbjct: 77  GAALITLTMLGAIVKVHGRNGYWSTANGYEYNLLLIAVAVALALTSAGAYSLDAVIFN 134


>B1D6J7.1 B1D6J7_9BACL DoxX family protein
          Length = 132

 Score = 85.9 bits (211), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 57/115 (49%), Positives = 66/115 (57%)

Query: 17  FIGHGSQKLFGWFGGYGPKGTGGWMESIGIKPGVLMAVMAGLMEXXXXXXXXXXXXTPXX 76
           F+GHG+QKLFG FGGYGPKGTGGWMES+GI+PGV+MAV AG++E            T   
Sbjct: 17  FVGHGAQKLFGLFGGYGPKGTGGWMESVGIRPGVVMAVFAGILELLGGALFTTGLFTVAA 76

Query: 77  XXXXXXXXXXXXXKVHAPNGFWSTANGIEFPLTXXXXXXXXXXXXXXSISLDALL 131
                        KVH PNG WSTANG E+PL               + SLDALL
Sbjct: 77  GVMILVTMAGAIVKVHLPNGLWSTANGYEYPLVLVAVAIGVALTGAGAYSLDALL 131


>B7GJT1.1 B7GJT1_ANOFW Predicted membrane protein
          Length = 143

 Score = 84.0 bits (206), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/115 (46%), Positives = 63/115 (54%)

Query: 17  FIGHGSQKLFGWFGGYGPKGTGGWMESIGIKPGVLMAVMAGLMEXXXXXXXXXXXXTPXX 76
           F+GHG+QKLFGWFGGYG KGTGGW+ESIG+KPGV MA++AGL E            TP  
Sbjct: 28  FVGHGAQKLFGWFGGYGLKGTGGWLESIGLKPGVTMALIAGLAEFVGGLLFALGLFTPFA 87

Query: 77  XXXXXXXXXXXXXKVHAPNGFWSTANGIEFPLTXXXXXXXXXXXXXXSISLDALL 131
                        KVHAPNGFW T NG E+                   S+DAL+
Sbjct: 88  ALLIAATMIVAIVKVHAPNGFWVTQNGFEYNFILIAVVIGIALIGAGDYSIDALI 142


>A6CHK0.1 A6CHK0_9BACI Putative uncharacterized protein
          Length = 132

 Score = 78.2 bits (191), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/117 (45%), Positives = 62/117 (52%)

Query: 16  AFIGHGSQKLFGWFGGYGPKGTGGWMESIGIKPGVLMAVMAGLMEXXXXXXXXXXXXTPX 75
           +F  HG+QKLFGWFGGYG KGTGGWMES+G+KPGV MA+ AGL E            TP 
Sbjct: 16  SFFAHGAQKLFGWFGGYGLKGTGGWMESLGLKPGVTMALFAGLAEFIGGILFVLGLLTPL 75

Query: 76  XXXXXXXXXXXXXXKVHAPNGFWSTANGIEFPLTXXXXXXXXXXXXXXSISLDALLF 132
                         KVH  NG+WST NG E+ L                 +LDA+LF
Sbjct: 76  AGIMIAVTMLVAITKVHYANGYWSTNNGYEYNLALLAVAIGLALTGPGQYALDAILF 132


>B1DDK5.1 B1DDK5_9BACL DoxX family protein
          Length = 132

 Score = 73.2 bits (178), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/115 (46%), Positives = 58/115 (50%)

Query: 17  FIGHGSQKLFGWFGGYGPKGTGGWMESIGIKPGVLMAVMAGLMEXXXXXXXXXXXXTPXX 76
            IGHG+QKLFGWFGGYG KGTGGW+ESIG+KPGVLMA  AGL E                
Sbjct: 17  MIGHGTQKLFGWFGGYGLKGTGGWLESIGMKPGVLMAAGAGLSEVLGGVLFGAGLWVEVG 76

Query: 77  XXXXXXXXXXXXXKVHAPNGFWSTANGIEFPLTXXXXXXXXXXXXXXSISLDALL 131
                        KVH  NG W T NG E+ L                IS+DALL
Sbjct: 77  AALLILTMIVAIAKVHGANGLWVTQNGYEYNLVLIAVLLGVAFTGAGDISIDALL 131


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.321    0.140    0.459 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 503,333,444
Number of extensions: 12548027
Number of successful extensions: 31718
Number of sequences better than 1.0e-05: 187
Number of HSP's gapped: 31586
Number of HSP's successfully gapped: 187
Length of query: 133
Length of database: 3,060,696,203
Length adjustment: 98
Effective length of query: 35
Effective length of database: 2,137,436,733
Effective search space: 74810285655
Effective search space used: 74810285655
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 125 (52.8 bits)