BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0548.0042.p (232 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0EUX3.1 C0EUX3_9FIRM Putative uncharacterized protein 241 3e-62 B0TF25.1 B0TF25_HELMI Haloacid dehalogenase-like hydrolase 234 6e-60 B1DBL6.1 B1DBL6_9BACL HAD-superfamily hydrolase, subfamily IA, v... 223 1e-56 C2FVR4.1 C2FVR4_9SPHI 5'-nucleotidase EC=3.1.3.5 221 6e-56 B6FUS4.1 B6FUS4_9CLOT Putative uncharacterized protein 219 1e-55 >C0EUX3.1 C0EUX3_9FIRM Putative uncharacterized protein Length = 580 Score = 241 bits (616), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 119/204 (58%), Positives = 149/204 (73%) Query: 9 QSILFDLDGTLTDPKEGITKSVEYALGKFNIAVEHPDLLLPYIGPPLYDSFMEIQGFTAE 68 Q +LFDLDGTLTDP GIT SV+YAL KF I V++ L+P+IGPPL DSF E G + E Sbjct: 3 QYLLFDLDGTLTDPMVGITSSVQYALEKFGIHVKYLKDLIPFIGPPLDDSFQEFYGLSKE 62 Query: 69 RSAQAVEFYRERYSTLGMFENAVIPGIPELLEELQGRGFDLYVATSKPTVFAEEIIRHYG 128 + +AVE+YRE ++ G+FEN V PGIPE+L L GF L VATSKP VFA++I+ H+G Sbjct: 63 DAGKAVEYYREYFAPKGIFENEVYPGIPEMLSRLVEAGFTLIVATSKPAVFAKQILEHFG 122 Query: 129 LDQYFRHVAGSNLDGTRSKKKEVIQHVLDEHQIAAGTAVMIGDREHDIIGARACGVASVG 188 L YF V GS LDGTR +K EVI ++L+ +I A+MIGDR+HDI GA+ CG+ SVG Sbjct: 123 LSDYFSFVGGSELDGTRKRKAEVIGYILETCEIKPQDAIMIGDRKHDIEGAKLCGLESVG 182 Query: 189 VLIGYGSREELQSAGADYIARNVK 212 VL GYGS EEL AGAD+I ++VK Sbjct: 183 VLYGYGSEEELSKAGADHIIKDVK 206 >B0TF25.1 B0TF25_HELMI Haloacid dehalogenase-like hydrolase Length = 222 Score = 234 bits (596), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 118/211 (55%), Positives = 151/211 (71%), Gaps = 1/211 (0%) Query: 11 ILFDLDGTLTDPKEGITKSVEYALGKFNIAVEHPDLLLPYIGPPLYDSFMEIQGFTAERS 70 ILFDLDGTLTDPK GITKSV+YAL K+ I VE D L+P+IGPPL +SF GF ++ Sbjct: 7 ILFDLDGTLTDPKTGITKSVQYALSKYGIIVEDLDSLIPFIGPPLIESFQRFYGFDESQA 66 Query: 71 AQAVEFYRERYSTLGMFENAVIPGIPELLEELQGRGFDLYVATSKPTVFAEEIIRHYGLD 130 +AV+FYRE +S G++ENA+ PGIPELL L G L VATSKPT FAE+I+RH+G+D Sbjct: 67 RRAVDFYREYFSVTGLYENALFPGIPELLARLSAAGKRLAVATSKPTCFAEQILRHFGID 126 Query: 131 QYFRHVAGSNLDGTRSKKKEVIQHVLDEH-QIAAGTAVMIGDREHDIIGARACGVASVGV 189 YF H+ GSNLDGTR K EV+ L ++ +M+GDREHDIIGA+A G+AS+ V Sbjct: 127 CYFDHIVGSNLDGTRCAKSEVVAAALALFPRVDRRRVIMVGDREHDIIGAKANGIASMAV 186 Query: 190 LIGYGSREELQSAGADYIARNVKDIGDIILH 220 GYGS EEL++AG IA +V+ I ++ + Sbjct: 187 SYGYGSLEELEAAGPGQIAGSVEVIEPLLAY 217 >B1DBL6.1 B1DBL6_9BACL HAD-superfamily hydrolase, subfamily IA, variant 1 Length = 221 Score = 223 bits (568), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 112/210 (53%), Positives = 150/210 (71%) Query: 9 QSILFDLDGTLTDPKEGITKSVEYALGKFNIAVEHPDLLLPYIGPPLYDSFMEIQGFTAE 68 SILFDLDGTLTDPK GIT +++Y+L KF I +++ D+L P+IGPPL SF E GFT E Sbjct: 6 SSILFDLDGTLTDPKLGITSAIQYSLSKFGIRIDNLDVLDPFIGPPLAGSFKEFYGFTDE 65 Query: 69 RSAQAVEFYRERYSTLGMFENAVIPGIPELLEELQGRGFDLYVATSKPTVFAEEIIRHYG 128 +A+++YRE ++ GM+EN GI E+L L+ +G LYVATSKPT FAE+II ++ Sbjct: 66 MCTEAIKYYREYFAERGMYENKRYEGIKEVLAALKEQGASLYVATSKPTFFAEKIIAYFE 125 Query: 129 LDQYFRHVAGSNLDGTRSKKKEVIQHVLDEHQIAAGTAVMIGDREHDIIGARACGVASVG 188 L+++F + GSNLD TR K EVI+HVL ++A AVMIGDR+HDIIGA+ G+ SVG Sbjct: 126 LNEFFEFIGGSNLDNTRVDKGEVIEHVLLSCGLSAEDAVMIGDRKHDIIGAKRHGIDSVG 185 Query: 189 VLIGYGSREELQSAGADYIARNVKDIGDII 218 V GYGS EEL+ A Y+A V ++G ++ Sbjct: 186 VGYGYGSEEELELAEPTYLAGTVNELGQLL 215 >C2FVR4.1 C2FVR4_9SPHI 5'-nucleotidase EC=3.1.3.5 Length = 217 Score = 221 bits (562), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 110/215 (51%), Positives = 150/215 (69%), Gaps = 1/215 (0%) Query: 5 MERLQSILFDLDGTLTDPKEGITKSVEYALGKFNIAVEHPDLLLPYIGPPLYDSFMEIQG 64 M++ +++LFDLDGTLTDP EGITKS+ YAL F+I + L P IGPPL S +EI Sbjct: 1 MKQYRNLLFDLDGTLTDPFEGITKSIAYALEHFDIETTDLNTLKPLIGPPLKQSLIEIYH 60 Query: 65 FTAERSAQAVEFYRERYSTLGMFENAVIPGIPELLEELQGRGFDLYVATSKPTVFAEEII 124 F +++ + V YRER++ G+FEN + GIPELL + +G+ LY+ATSKPTVFA +I+ Sbjct: 61 FDEQKADEGVAKYRERFADKGLFENILFEGIPELLASARSKGYKLYLATSKPTVFATQIL 120 Query: 125 RHYGLDQYFRHVAGSNLDGTRSKKKEVIQHVLDEHQIAAGT-AVMIGDREHDIIGARACG 183 H+ LDQYF V GS LD +R K VI++VL E+ I T +MIGDR+HDIIGA+ G Sbjct: 121 NHFHLDQYFEFVGGSELDDSRPTKTHVIEYVLQENNIQNLTETLMIGDRKHDIIGAKNTG 180 Query: 184 VASVGVLIGYGSREELQSAGADYIARNVKDIGDII 218 + SVGVL G+G +EEL AGA YIA ++ + +++ Sbjct: 181 LDSVGVLYGFGDQEELSHAGATYIAEDIPALKNML 215 >B6FUS4.1 B6FUS4_9CLOT Putative uncharacterized protein Length = 215 Score = 219 bits (559), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 114/211 (54%), Positives = 145/211 (68%), Gaps = 1/211 (0%) Query: 5 MERLQSILFDLDGTLTDPKEGITKSVEYALGKFNIAVEHPDLLLPYIGPPLYDSFMEIQG 64 M + ILFDLDGTLTDPKEGITKSV YAL F I VE D L +IGPPL DSFM+ G Sbjct: 1 MRDYKYILFDLDGTLTDPKEGITKSVAYALKHFGIDVEDLDTLCKFIGPPLKDSFMQYYG 60 Query: 65 FTAERSAQAVEFYRERYSTLGMFENAVIPGIPELLEELQGRGFDLYVATSKPTVFAEEII 124 + + + AVE YRE + GMF+N V G+ LL+EL+ G ++ +ATSKP V+A++I+ Sbjct: 61 LSEDDAHLAVEKYREYFEPCGMFQNKVYDGVENLLKELKTSGKEIVLATSKPGVYAQKIL 120 Query: 125 RHYGLDQYFRHVAGSNLDGTRSKKKEVIQHVLDEHQIAA-GTAVMIGDREHDIIGARACG 183 H+ LD YF +VAGS LDG R KK +VI + L++ I AVMIGDREHDIIGA+ G Sbjct: 121 EHFHLDSYFSYVAGSELDGRRVKKGDVIAYALEKMNIKEYSQAVMIGDREHDIIGAKEHG 180 Query: 184 VASVGVLIGYGSREELQSAGADYIARNVKDI 214 ++ +GVL GYGSREE + GAD I V ++ Sbjct: 181 LSCIGVLYGYGSREEFERYGADCIVETVSEL 211 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.139 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,386,120,169 Number of extensions: 58018370 Number of successful extensions: 174579 Number of sequences better than 1.0e-05: 1811 Number of HSP's gapped: 173292 Number of HSP's successfully gapped: 1811 Length of query: 232 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 101 Effective length of database: 1,826,543,238 Effective search space: 184480867038 Effective search space used: 184480867038 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 129 (54.3 bits)