BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0548.0032.p (156 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B8HC64.1 B8HC64_ARTCA Oxidoreductase domain protein 123 5e-27 B6F7Z8.1 B6F7Z8_9ENTR Putative uncharacterized protein 115 1e-24 C1Q1D3.1 C1Q1D3_9FIRM Predicted dehydrogenase 114 3e-24 C2CK16.1 C2CK16_9FIRM Oxidoreductase domain protein 109 9e-23 A1HMT2.1 A1HMT2_9FIRM Oxidoreductase domain protein 106 7e-22 >B8HC64.1 B8HC64_ARTCA Oxidoreductase domain protein Length = 335 Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 59/144 (40%), Positives = 88/144 (61%) Query: 1 MEGARLVAVADTDPVKAAEAAENYGCEALTDYKQLLGRTDIGIVHLCTPHHLHAPMAAEF 60 M A LVAV DT P + A A +G D+++LL + +VH+CTPHHLHA +A + Sbjct: 23 MPDAELVAVCDTHPGRLAAAEAAHGVAGYADHRELLRKVRPDVVHICTPHHLHASLAIDC 82 Query: 61 LEAGHHVLTEKPIALDVPSARRIQEVAAASQGQLGIVFQNRYNNPSIRIKETIDSGILGR 120 L+AG +V+ EKP+A + R++ AA ++G+ FQNRYN S+ ++E +D G LGR Sbjct: 83 LDAGVNVIVEKPLAHTLEEGRKLVAAAARGTAKIGVCFQNRYNATSVAMRELLDGGTLGR 142 Query: 121 LICMKGIVTWYRSEDYYTESGWGG 144 ++ V W+R+ DYY + W G Sbjct: 143 VLGASATVMWHRTADYYRDRPWRG 166 >B6F7Z8.1 B6F7Z8_9ENTR Putative uncharacterized protein Length = 340 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 55/139 (39%), Positives = 83/139 (59%) Query: 6 LVAVADTDPVKAAEAAENYGCEALTDYKQLLGRTDIGIVHLCTPHHLHAPMAAEFLEAGH 65 L A+ADTD VK + Y C DY+++L + +VH+CTPH H M L AG Sbjct: 30 LRALADTDSVKGLKLGMAYQCRFYQDYREMLLDDTLDVVHICTPHFEHKNMILAALNAGK 89 Query: 66 HVLTEKPIALDVPSARRIQEVAAASQGQLGIVFQNRYNNPSIRIKETIDSGILGRLICMK 125 HV EKP+ ++ I AA + G+LG+ +QNR N S+RI++ ++ G LG+++ ++ Sbjct: 90 HVFCEKPVVMNSSELADIMAAAAQATGKLGVCYQNRLNPTSLRIRKELEDGGLGKMLSIR 149 Query: 126 GIVTWYRSEDYYTESGWGG 144 ++TW RS YYT+S W G Sbjct: 150 AMLTWSRSGAYYTDSPWRG 168 >C1Q1D3.1 C1Q1D3_9FIRM Predicted dehydrogenase Length = 341 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 55/146 (37%), Positives = 87/146 (59%), Gaps = 6/146 (4%) Query: 4 ARLVAVADTDPVKAAEAAENYGCEAL---TDYKQLLGRTDIGIVHLCTPHHLHAPMAAEF 60 A+LVAV D + +A E E CE + TDYK+++ + D+ +VH+ PH+LHA ++ Sbjct: 26 AKLVAVCDINSNRAKEKCEQTHCEIIPSYTDYKEMIEKEDLDVVHITLPHYLHAEVSKYA 85 Query: 61 LEAGHHVLTEKPIALDVPSARRIQEVAAASQG--QLGIVFQNRYNNPSIRIKETIDSGIL 118 L G +V EKP+ + + + + A +G +LGI FQNRYN +R+KE ++ Sbjct: 86 LSKGLNVFCEKPVDISYEKTKDLYDFYQAYKGKQKLGICFQNRYNKSVVRLKEILEEN-K 144 Query: 119 GRLICMKGIVTWYRSEDYYTESGWGG 144 + +KG+VTWYR+ DYY ++ W G Sbjct: 145 EEVFAVKGLVTWYRNMDYYKQAPWRG 170 >C2CK16.1 C2CK16_9FIRM Oxidoreductase domain protein Length = 341 Score = 109 bits (272), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 53/146 (36%), Positives = 82/146 (56%), Gaps = 6/146 (4%) Query: 4 ARLVAVADTDPVKAAEAAENYGCEA---LTDYKQLLGRTDIGIVHLCTPHHLHAPMAAEF 60 A LVAV D D +A + E CE+ T+YK+++ + D+ +VH+C PHHLH ++ Sbjct: 26 ADLVAVCDIDSNRAKDKCEMTHCESNTYYTNYKEMIDKEDLDLVHICLPHHLHTEVSKYA 85 Query: 61 LEAGHHVLTEKPIALDVPSARRIQEV--AAASQGQLGIVFQNRYNNPSIRIKETIDSGIL 118 L G HV EKP+ + + + + + +LGI FQNRYN ++KE ++ Sbjct: 86 LAKGLHVFCEKPVDVSYEKTKELYDFYQTYKDRQKLGICFQNRYNKTVQKLKELLEDN-K 144 Query: 119 GRLICMKGIVTWYRSEDYYTESGWGG 144 + +KG+VTWYR DYY ++ W G Sbjct: 145 EEVFGVKGLVTWYRGMDYYKQAAWRG 170 >A1HMT2.1 A1HMT2_9FIRM Oxidoreductase domain protein Length = 340 Score = 106 bits (265), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 76/144 (52%) Query: 1 MEGARLVAVADTDPVKAAEAAENYGCEALTDYKQLLGRTDIGIVHLCTPHHLHAPMAAEF 60 + GAR+ V + A+ A +G +A Y+ +L I+ LC P LH + Sbjct: 24 IPGARITGVWSRNAEATAKFAAKHGIKAFKSYEDVLADAKTDIISLCLPPGLHVDFGLQA 83 Query: 61 LEAGHHVLTEKPIALDVPSARRIQEVAAASQGQLGIVFQNRYNNPSIRIKETIDSGILGR 120 AG H++ EKP+ +D ARR+ EV A L ++FQNR+ + R+K +D+G+LGR Sbjct: 84 AAAGKHLIVEKPMDIDAAKARRLIEVYRAKNLVLSVIFQNRFTPAAQRVKAALDAGLLGR 143 Query: 121 LICMKGIVTWYRSEDYYTESGWGG 144 LI V WYRS +YY W G Sbjct: 144 LILGDAYVKWYRSPEYYANGAWRG 167 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.136 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 912,292,997 Number of extensions: 34085930 Number of successful extensions: 83215 Number of sequences better than 1.0e-05: 2248 Number of HSP's gapped: 83512 Number of HSP's successfully gapped: 2248 Length of query: 156 Length of database: 3,060,696,203 Length adjustment: 117 Effective length of query: 39 Effective length of database: 1,958,437,448 Effective search space: 76379060472 Effective search space used: 76379060472 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 126 (53.1 bits)