BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0548.0021.p
         (119 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C0ZH95.1 C0ZH95_BREBN Putative uncharacterized protein                119   1e-25
B1DE39.1 B1DE39_9BACL Methyltransferase type 11                       110   4e-23
C0Z625.1 C0Z625_BREBN Putative uncharacterized protein                 96   1e-18
C1T7U1.1 C1T7U1_9FIRM Phospholipid N-methyltransferase                 83   1e-14
C5BGF8.1 C5BGF8_EDWIC Putative uncharacterized protein                 80   7e-14

>C0ZH95.1 C0ZH95_BREBN Putative uncharacterized protein
          Length = 199

 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/112 (52%), Positives = 72/112 (64%)

Query: 3   FEKDPYLRKRLQTAFPGYTCYPDCCKLELALHNENSGPLDCILSGLPFFNFPQSMRDLLM 62
           FEK+  +R RL+  FP    + D   L   L +   G  DCILSGLPF NFPQ +RD +M
Sbjct: 81  FEKETKMRMRLEPQFPDVRFHEDAVDLNRVLTDAGLGKADCILSGLPFANFPQELRDQIM 140

Query: 63  EQILSALKEDGLFIAFQYSKQMKKQLEQHFVIERICFVPRNLPPAFVYVCRK 114
           +Q+  ALK  G+F+AFQYS QMKKQL   F    +  VP NLPPAFVY+CRK
Sbjct: 141 DQVYHALKPGGVFVAFQYSLQMKKQLSSVFEQVSVKMVPLNLPPAFVYICRK 192


>B1DE39.1 B1DE39_9BACL Methyltransferase type 11
          Length = 192

 Score =  110 bits (275), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 58/114 (50%), Positives = 70/114 (61%)

Query: 1   MLFEKDPYLRKRLQTAFPGYTCYPDCCKLELALHNENSGPLDCILSGLPFFNFPQSMRDL 60
           +LFEKD  + ++L   FP +T   +  +L   L   N   +D I SGLPF+NFP  MR  
Sbjct: 71  ILFEKDEEMAQKLHQNFPQFTREGNALRLVAQLKKHNIHEVDYIFSGLPFYNFPTDMRLQ 130

Query: 61  LMEQILSALKEDGLFIAFQYSKQMKKQLEQHFVIERICFVPRNLPPAFVYVCRK 114
           L+ Q   ALK  G  IAFQYS QMK  L +HF IE I  VP N+PPAFVYVCRK
Sbjct: 131 LILQCKEALKPGGKLIAFQYSLQMKNLLSEHFEIETISLVPLNIPPAFVYVCRK 184


>C0Z625.1 C0Z625_BREBN Putative uncharacterized protein
          Length = 192

 Score = 95.9 bits (237), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 69/118 (58%)

Query: 1   MLFEKDPYLRKRLQTAFPGYTCYPDCCKLELALHNENSGPLDCILSGLPFFNFPQSMRDL 60
           +L E+D   R  LQ+ FP      +  KL   L  ++    D I+SGLPF NF Q +R  
Sbjct: 69  VLVERDSQFRSMLQSRFPDLPIREEATKLRSYLEEQDLAGADVIISGLPFANFQQELRAA 128

Query: 61  LMEQILSALKEDGLFIAFQYSKQMKKQLEQHFVIERICFVPRNLPPAFVYVCRKKRAD 118
           +++++ S LK  GLFI FQYS Q++ +L+  F   +I F   N+PPAF+Y CR  +++
Sbjct: 129 ILDEVQSVLKPGGLFITFQYSLQLQAELQDRFPWVKIDFTLLNIPPAFIYTCRNGQSE 186


>C1T7U1.1 C1T7U1_9FIRM Phospholipid N-methyltransferase
          Length = 191

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 62/114 (54%)

Query: 2   LFEKDPYLRKRLQTAFPGYTCYPDCCKLELALHNENSGPLDCILSGLPFFNFPQSMRDLL 61
           LFEKD  +   L++ FPG   + D  K+           +D ++SGLPF   P  +R+ +
Sbjct: 69  LFEKDERMNAELKSKFPGIKLFSDALKIPELRSTGEIEQVDLVISGLPFTAMPGEIRNKI 128

Query: 62  MEQILSALKEDGLFIAFQYSKQMKKQLEQHFVIERICFVPRNLPPAFVYVCRKK 115
           +E     LK  G FIAFQYS  M K LE+ +    + FV  N+PPAF+Y C K+
Sbjct: 129 LEGAFDILKPGGKFIAFQYSLHMLKHLEKMYNRVDVEFVLLNIPPAFIYRCVKE 182


>C5BGF8.1 C5BGF8_EDWIC Putative uncharacterized protein
          Length = 182

 Score = 79.7 bits (195), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 1/74 (1%)

Query: 42  DCILSGLPFFNFPQSMRDLLMEQILSALKEDGLFIAFQYSKQMKKQLEQHFVIERICFVP 101
           D I SGLP   FPQ++R  ++ Q   AL  DG+FI FQYS  ++  L  HF+ +R   V 
Sbjct: 110 DTIFSGLPLLAFPQTLRQTILAQAARALTLDGVFIQFQYSPLLEDSLSAHFLWQR-TLVW 168

Query: 102 RNLPPAFVYVCRKK 115
           RNLPPAFVY+CR +
Sbjct: 169 RNLPPAFVYLCRAR 182


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.329    0.144    0.456 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 705,347,214
Number of extensions: 24909960
Number of successful extensions: 62960
Number of sequences better than 1.0e-05: 106
Number of HSP's gapped: 62941
Number of HSP's successfully gapped: 106
Length of query: 119
Length of database: 3,060,696,203
Length adjustment: 85
Effective length of query: 34
Effective length of database: 2,259,909,928
Effective search space: 76836937552
Effective search space used: 76836937552
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 126 (53.1 bits)