BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0548.0019.p (506 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C2W9C1.1 C2W9C1_BACCE Putative uncharacterized protein 444 e-122 C0ZDD4.1 C0ZDD4_BREBN Putative uncharacterized protein 432 e-119 A6PR90.1 A6PR90_9BACT Putative uncharacterized protein 430 e-118 A6PLC1.1 A6PLC1_9BACT Putative uncharacterized protein 408 e-112 A4ANJ2.1 A4ANJ2_9FLAO Putative uncharacterized protein 404 e-110 >C2W9C1.1 C2W9C1_BACCE Putative uncharacterized protein Length = 587 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 212/501 (42%), Positives = 301/501 (60%), Gaps = 13/501 (2%) Query: 4 LYGNRGNNVLTFACSDVLHPVELHAGLHEETSCFHCSVTLCAEPRPPVDHLEVVLRLDTR 63 Y +G N L A S+ + V + G+HEET +TL EP + V+R+D R Sbjct: 92 FYNQKGQNRLAVAYSNAMDTVNFNLGVHEETGTMKAQITLFTEPSKVRSSYDGVIRVDMR 151 Query: 64 SCPYYEALRGVGEWWAGLPGCEPSPVPEAAREPMYSTWYSFHQQXXXXXXXXXXXXXXXX 123 PYY+A++ + W+ + G PS VPE A+ PMYSTWYSFHQ Sbjct: 152 DIPYYQAIQDISVWYEEMDGYGPSFVPETAKLPMYSTWYSFHQDISDDEIEKQCEIAKQL 211 Query: 124 GCQTVIVDDGWQTSDETRGYAYCGDWRVSADKIPDLKAHVASIHNLGMKFMLWYAVPFIG 183 GC VIVDDGWQT D+ RGYAYCGDW VS +I ++ HV +H+LGMK++LWY+VPF+G Sbjct: 212 GCGAVIVDDGWQTEDDHRGYAYCGDWEVSPKRIVGMREHVERVHDLGMKYLLWYSVPFVG 271 Query: 184 KHSEAWARFRDQLLYVNDEMGAGVVDPRYPEVREYLTGIYEQAVRYWDLDGFKLDFIDSF 243 +S+ W RF+ ++LY +D + AGV+DPRYPEVREYL YE+A++ WDLDGFK DFID F Sbjct: 272 IYSKTWERFQSKILYFSDHLQAGVLDPRYPEVREYLISTYEKALKEWDLDGFKFDFIDLF 331 Query: 244 YAVKDSPPGKGAG------QDTASVPEAVDKXXXXXXXXXXXXKPDILIEFRQNYIGPLM 297 D KG +D SV EAVD+ KP I++EFRQ YIGP M Sbjct: 332 ----DLNRAKGQAIQFDPERDYESVQEAVDRLFTDIMESLKLIKPSIMVEFRQRYIGPYM 387 Query: 298 RKYGNMFRAGDCPNDAVQNRMKTIDIRLICGSTPAHADMLMWNPQETPAAAALQFINVLF 357 RKYGN+FR GDCPNDA+ NR+ +D+RL+ G+T H+DM+MW+P++T AALQ INV+F Sbjct: 388 RKYGNIFRVGDCPNDAITNRVGIMDLRLLSGNTAVHSDMIMWSPEDTTENAALQLINVIF 447 Query: 358 SVPQISVRLDRLAQXXXXHAAMLAFWLTFWREHREVLLNGRXXXXXXXXXXXXIIARTAQ 417 VPQ S+R ++L + H M FWL F +++++VLLNG + Sbjct: 448 GVPQFSMRFEKLNK---DHFEMAKFWLGFSKKYQDVLLNGDLKPTAPELLYPIVETVNDS 504 Query: 418 QWVIAAYLDMVIPLSGDLPDRVQVVNGTLLTRLVLELDREPGPLDIKVRDCQGTVTAEYK 477 +IA Y D+ I ++P+ +VNGTL +L+L+++ + I+ C G + ++K Sbjct: 505 TRLIAIYADVCIKTGTNIPEEFIIVNGTLNEGFILDLEKDLVNITIETYSCTGRLIRKHK 564 Query: 478 MNWNSRVYALEVPPAGVITLQ 498 + + ++ +E+ +GV+ + Sbjct: 565 TDLSKGLHRMEIEKSGVLIFR 585 >C0ZDD4.1 C0ZDD4_BREBN Putative uncharacterized protein Length = 586 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 213/491 (43%), Positives = 294/491 (59%), Gaps = 5/491 (1%) Query: 9 GNNVLTFACSDVLHPVELHAGLHEETSCFHCSVTLCAEPRPPVDHLEVVLRLDTRSCPYY 68 G N L A S+ + V H G+ EE C +TL +EP P+ E +R+D R P+ Sbjct: 95 GRNRLAIAYSNAIETVNFHMGIREEDGTIRCQITLFSEPSKPMKRYEGTIRIDQRDIPFE 154 Query: 69 EALRGVGEWWAGLPGCEPSPVPEAAREPMYSTWYSFHQQXXXXXXXXXXXXXXXXGCQTV 128 +A++ + W+ + P +P+AA PMYSTWYSFHQ+ GC TV Sbjct: 155 QAIQAISYWYESMDAYRPCMIPKAATFPMYSTWYSFHQELVDKEIEQQCRMAKEIGCDTV 214 Query: 129 IVDDGWQTSDETRGYAYCGDWRVSADKIPDLKAHVASIHNLGMKFMLWYAVPFIGKHSEA 188 IVDDGWQT+D RGYAYCGDW V+ KI ++KAHV + +GMK++LWY++PFIG HS+A Sbjct: 215 IVDDGWQTTDNQRGYAYCGDWEVAHQKIGNMKAHVQKVQAMGMKYILWYSMPFIGLHSKA 274 Query: 189 WARFRDQLLYVNDEMGAGVVDPRYPEVREYLTGIYEQAVRYWDLDGFKLDFIDSFYAVK- 247 W ++D+LL + + AGV+DPRYPEVREYL YE A+ W +DGFKLDFID F K Sbjct: 275 WDTYKDKLLGYREHLQAGVLDPRYPEVREYLISTYETALNEWGVDGFKLDFIDEFDLNKA 334 Query: 248 -DSPPGKGAGQDTASVPEAVDKXXXXXXXXXXXXKPDILIEFRQNYIGPLMRKYGNMFRA 306 D K +D SV EAV+ K D++IEFRQ YIGP MR++GN+FR Sbjct: 335 NDKALEKDGRRDFDSVQEAVECLLEGIFARLHARKADVMIEFRQKYIGPFMRRFGNIFRV 394 Query: 307 GDCPNDAVQNRMKTIDIRLICGSTPAHADMLMWNPQETPAAAALQFINVLFSVPQISVRL 366 DCPNDAV NR+ TID+RL G+T H+DMLMW+P++T AALQ INVLF+VPQ+S+R Sbjct: 395 ADCPNDAVTNRVGTIDLRLFSGNTAVHSDMLMWSPEDTVENAALQLINVLFAVPQLSMRF 454 Query: 367 DRLAQXXXXHAAMLAFWLTFWREHREVLLNGRXXXXXXXXXXXXIIARTAQQWVIAAYLD 426 ++L H M FWL FWRE+R+VLL G + AR + + V+A + Sbjct: 455 EKLP---PEHIEMTKFWLKFWRENRDVLLFGELRAEAPELLYPNVQARNSSKVVMAVFGS 511 Query: 427 MVIPLSGDLPDRVQVVNGTLLTRLVLELDREPGPLDIKVRDCQGTVTAEYKMNWNSRVYA 486 + + ++ ++NGTL LVL++DRE +++ DC G + + + + Sbjct: 512 PYVKVVEPGNKKLFIMNGTLHQELVLDVDRELPNRVVEIYDCCGNLVSMAPLAVQKVPHR 571 Query: 487 LEVPPAGVITL 497 L+V P+G+ L Sbjct: 572 LKVKPSGLAIL 582 >A6PR90.1 A6PR90_9BACT Putative uncharacterized protein Length = 589 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 213/466 (45%), Positives = 289/466 (62%), Gaps = 6/466 (1%) Query: 1 VISLYGNRGNNVLTFACSDVLHPVELHAGLHEETSCFHCSVTLCAEPRPPVDHLEVVLRL 60 V++L+ G N LTFA SD ++ +E+H G+ E S C++ P PV E LRL Sbjct: 95 VMTLFNQAGENRLTFAFSDAMNQLEMHCGVEERNSVMECALEAFRSPTAPVSGYECTLRL 154 Query: 61 DTRSCPYYEALRGVGEWWAGLPGCEPSPVPEAAREPMYSTWYSFHQQXXXXXXXXXXXXX 120 D R Y AL V WWA +P PSPVP ARE +YS+WYS+HQ Sbjct: 155 DIRPVRYERALNDVAAWWAEMPEYRPSPVPAEAREVVYSSWYSYHQDLFAPELEAECRAA 214 Query: 121 XXXGCQTVIVDDGWQTSDETRGYAYCGDWRVSADKIPDLKAHVASIHNLGMKFMLWYAVP 180 G +++IVDDGWQT D RGYA+CGDW V ++ PD+ AHV ++H G+K++LWY++P Sbjct: 215 AGFGMKSIIVDDGWQTLDNHRGYAFCGDWEVCQERFPDMAAHVRNVHASGLKYVLWYSMP 274 Query: 181 FIGKHSEAWARFRDQLLYVNDEMGAGVVDPRYPEVREYLTGIYEQAVRYWDLDGFKLDFI 240 ++GK A+ RFRD+ L+ + +GA +DPR+PEVR+YL G+YE+A+R WDLDGFKLDFI Sbjct: 275 WLGKKCRAFERFRDKTLFFEERLGAAALDPRFPEVRDYLIGLYEKALREWDLDGFKLDFI 334 Query: 241 DSFYAVKDSP--PGKGAGQDTASVPEAVDKXXXXXXXXXXXXKPDILIEFRQNYIGPLMR 298 D+F + P AG+D S+PEAVD KP+++IEFRQ YIGP MR Sbjct: 335 DTFEIRGEDPAVAENYAGRDFKSLPEAVDVLLSETMRRLRAIKPEVMIEFRQRYIGPAMR 394 Query: 299 KYGNMFRAGDCPNDAVQNRMKTIDIRLICGSTPAHADMLMWNPQETPAAAALQFINVLFS 358 KYGNMFRA DCPNDAV NR++TID+R++ G + HADMLMWN E AALQ +NVLFS Sbjct: 395 KYGNMFRAADCPNDAVTNRVRTIDVRMLAGDSAVHADMLMWNYAEPVETAALQLLNVLFS 454 Query: 359 VPQISVRLDRLAQXXXXHAAMLAFWLTFWREHREVLLNGRXXXXXXXXXXXXIIARTAQQ 418 VPQ+SVRL+ + H AML F+L FWRE+R+VLL+G + A ++ Sbjct: 455 VPQVSVRLEAVP---AEHRAMLRFYLGFWREYRDVLLDGTLRADHPELDYPRVTAIRGRR 511 Query: 419 WVIAAYL-DMVIPLSGDLPDRVQVVNGTLLTRLVLELDREPGPLDI 463 V A Y D V+ + D + +VN + + + L+L P +++ Sbjct: 512 QVTALYAQDQVVEFAPAPGDELCIVNASGKSGVYLDLAEAPVAVEL 557 >A6PLC1.1 A6PLC1_9BACT Putative uncharacterized protein Length = 587 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 214/471 (45%), Positives = 281/471 (59%), Gaps = 11/471 (2%) Query: 1 VISLYGNRGNNVLTFACSDVLHPVELHAGLHEETSCFHCSVTLCAEPRPPVDHLEVVLRL 60 V+ L G N L FA S+ + PV++ AG+HEET CSV L P P+ E++LRL Sbjct: 93 VLLLGSQSGENRLLFAVSEAMRPVKIKAGVHEETCEAACSVELFTCPEAPIAAYELLLRL 152 Query: 61 DTRSCPYYEALRGVGEWWAGLPGCEPSPVPEAAREPMYSTWYSFHQQXXXXXXXXXXXXX 120 D R Y EA+R W A P E + VP AA EP YS+WYSFHQ Sbjct: 153 DIRPLFYAEAIREAFGWLASFPEYEAAAVPPAAYEPFYSSWYSFHQNLFAPELERECALA 212 Query: 121 XXXGCQTVIVDDGWQTSDETRGYAYCGDWRVSADKIPDLKAHVASIHNLGMKFMLWYAVP 180 G + VI+DDGWQT D RGYA+CGDW +S + PD++AHV +H LGMK+++W++VP Sbjct: 213 ARYGMKGVIIDDGWQTDDNRRGYAFCGDWEISERRFPDMRAHVERVHRLGMKYLVWFSVP 272 Query: 181 FIGKHSEAWARFRDQLLYVNDEMGAGVVDPRYPEVREYLTGIYEQAVRYWDLDGFKLDFI 240 F+G S RF + LY +E+G V+DPR+PEVRE+L YE+A+ WD+DGFKLDFI Sbjct: 273 FMGDRSRNRERFGGKFLYRLEELGTAVLDPRFPEVREFLISTYEKALVQWDIDGFKLDFI 332 Query: 241 DSFYAVKDSPPGKG--AGQDTASVPEAVDKXXXXXXXXXXXXKPDILIEFRQNYIGPLMR 298 DSF + P + AG+D S+PEAV+ KP ILIEFRQ+YIGP +R Sbjct: 333 DSFRFDGEDPAVREDYAGRDLRSLPEAVNLLLSETRSRLERIKPGILIEFRQSYIGPAIR 392 Query: 299 KYGNMFRAGDCPNDAVQNRMKTIDIRLICGSTPAHADMLMWNPQETPAAAALQFINVLFS 358 KYGN+FR GDCP D + NR+ ID+RL G T H+DML WN ++T AALQ +NV+FS Sbjct: 393 KYGNLFRVGDCPGDFLSNRLGVIDLRLTSGDTAVHSDMLEWNSRDTVENAALQLLNVIFS 452 Query: 359 VPQISVRLDRLAQXXXXHAAMLAFWLTFWREHREVLLNGRXXXXXXXXXXXXIIARTAQQ 418 VPQISVRL L + H ML FWL F H+EVLL+G+ ++A T + Sbjct: 453 VPQISVRLADLPE---EHREMLKFWLDFMHVHQEVLLHGKLTPYHPELNYPLVVAETETE 509 Query: 419 WVIAAY-LDMVIPLSGDLPDRVQVVNGTLLTRLVLELDREPGPLDIKVRDC 468 VIA Y D+ +P+ ++NG+ RL+LEL PL ++ C Sbjct: 510 MVIAVYGGDLAVPVPPRPGKCCWIINGSGSGRLLLEL-----PLPVRQAVC 555 >A4ANJ2.1 A4ANJ2_9FLAO Putative uncharacterized protein Length = 615 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 202/497 (40%), Positives = 289/497 (58%), Gaps = 5/497 (1%) Query: 1 VISLYGNRGNNVLTFACSDVLHPVELHAGLHEETSCFHCSVTLCAEPRPPVDHLEVVLRL 60 VI+L+G+ +N LTF+ S+ L+ L +G+ EE + VT +E + EV +R Sbjct: 120 VITLFGHDDSNRLTFSASEALNTTILSSGIMEEDGLVYNKVTFFSEKYRSLKTYEVKVRF 179 Query: 61 DTRSCPYYEALRGVGEWWAGLPGCEPSPVPEAAREPMYSTWYSFHQQXXXXXXXXXXXXX 120 DTRS Y +AL V +WWA PS VPE AR+P+YS+WYS+HQ Sbjct: 180 DTRSQLYSKALNQVADWWASFELYTPSQVPEVARKPVYSSWYSYHQNVTMKNLLAECRLA 239 Query: 121 XXXGCQTVIVDDGWQTSDETRGYAYCGDWRVSADKIPDLKAHVASIHNLGMKFMLWYAVP 180 G +++IVDDGWQT D +RGYAY GDW ++IP++K VA++H+L MKFMLWY VP Sbjct: 240 KKMGFESIIVDDGWQTLDSSRGYAYTGDWE--PERIPEMKEFVAAVHDLDMKFMLWYGVP 297 Query: 181 FIGKHSEAWARFRDQLLYVNDEMGAGVVDPRYPEVREYLTGIYEQAVRYWDLDGFKLDFI 240 F+G+ S+A+ + + + L D G V+DPRYPEVR+++ Y A WDLDGFKLDFI Sbjct: 298 FVGEKSKAYEKMKGKFLRYWDGQGTYVLDPRYPEVRQFIIQTYIDATEAWDLDGFKLDFI 357 Query: 241 DSFYAVKDSPPGKGAGQDTASVPEAVDKXXXXXXXXXXXXKPDILIEFRQNYIGPLMRKY 300 F A D+ K G+D ASV EA D KPDI+IEFRQ Y+GP MRKY Sbjct: 358 GRFNAGNDTELTKENGRDYASVNEATDVLMTDLMKSLQEIKPDIMIEFRQPYVGPAMRKY 417 Query: 301 GNMFRAGDCPNDAVQNRMKTIDIRLICGSTPAHADMLMWNPQETPAAAALQFINVLFSVP 360 GNMFRA DCPN A NR++T D+R + G+T H+DMLMW+ E AALQ +NV++SVP Sbjct: 418 GNMFRATDCPNLASVNRIRTSDLRFLSGNTAVHSDMLMWHYDEPVEVAALQMLNVMYSVP 477 Query: 361 QISVRLDRLAQXXXXHAAMLAFWLTFWREHREVLLNGRXXXXXXXXXXXXIIARTAQQWV 420 QISVRL+ + + H+ M+ + ++W + VLL+G + + + Sbjct: 478 QISVRLEDIPE---DHSKMIKHYTSYWLNNSAVLLDGEFHAISPLTNYPVLEGWNKDKKI 534 Query: 421 IAAYLDMVIPLSGDLPDRVQVVNGTLLTRLVLELDREPGPLDIKVRDCQGTVTAEYKMNW 480 + D V+ ++ + + V+N TRL++ D +++C G +T+E + Sbjct: 535 TTVFNDQVVEINQEKFTHIDVLNAKRSTRLIIAATGVERNFDYVIKNCLGEITSEDTIQI 594 Query: 481 NSRVYALEVPPAGVITL 497 + EVPP+G+I+ Sbjct: 595 TQGTHTFEVPPSGLISF 611 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.138 0.449 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,998,627,911 Number of extensions: 118954500 Number of successful extensions: 222394 Number of sequences better than 1.0e-05: 26 Number of HSP's gapped: 222513 Number of HSP's successfully gapped: 26 Length of query: 506 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 366 Effective length of database: 1,741,754,103 Effective search space: 637482001698 Effective search space used: 637482001698 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 133 (55.8 bits)