BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0547.0050.p (207 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KGH7.1 B3KGH7_9BACI Putative uncharacterized protein 261 2e-68 Q9K9K8.1 Y2637_BACHD UPF0637 protein BH2637 240 6e-62 Q2B4X1.1 Q2B4X1_9BACI Putative uncharacterized protein 231 2e-59 C0ZGG1.1 C0ZGG1_BREBN Putative uncharacterized protein 230 5e-59 A6CTB0.1 A6CTB0_9BACI Putative uncharacterized protein 216 8e-55 >B3KGH7.1 B3KGH7_9BACI Putative uncharacterized protein Length = 207 Score = 261 bits (668), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 123/207 (59%), Positives = 151/207 (72%) Query: 1 MPFQGFTAEDFDVFHIDGLEPRMEALIAGVRPKLNELGEELAPFLSILTGEEMFPHVAKH 60 M GF +DFDVF + GLE RME LI VRPKL LG ELAP++S L GEEMF HVAKH Sbjct: 1 MTVTGFKDQDFDVFSVPGLEARMEVLIERVRPKLETLGAELAPYVSALVGEEMFVHVAKH 60 Query: 61 ARRTVHAPNDTWVAWGPNKRGYKALPHFQVGMFHSHLFIVFAIIYESSNKVIFAEALSRH 120 ARRTV+ P DTWVAW +KRGYKALPHF+VGMF +HLF++FAIIYES NK +FA L Sbjct: 61 ARRTVNPPIDTWVAWAASKRGYKALPHFEVGMFGTHLFVIFAIIYESPNKTVFAGNLEAK 120 Query: 121 LGDVQAELPAGYFWSTDHLDPRGTAQADMDKSAFAGLSQRLKEVKKAEVTCGLRIDRNDP 180 L LP ++WS DH++P GT DM + F L ++LK+VKKAEV CGLRI R + Sbjct: 121 LKKTAKALPKHFYWSMDHMNPAGTPHQDMSEEDFVRLIEKLKQVKKAEVMCGLRIPREEA 180 Query: 181 VLADGDKLLNVIRQTFETLLPLYRMSF 207 V +GD+L+ +++TFETLLPLY+M+F Sbjct: 181 VKLEGDELVQKVQETFETLLPLYKMAF 207 >Q9K9K8.1 Y2637_BACHD UPF0637 protein BH2637 Length = 213 Score = 240 bits (612), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 112/206 (54%), Positives = 146/206 (70%) Query: 1 MPFQGFTAEDFDVFHIDGLEPRMEALIAGVRPKLNELGEELAPFLSILTGEEMFPHVAKH 60 M GF DFDVF IDGLEPRME + +RPKL G ELAP LS LTG+EMF H AKH Sbjct: 1 MSIPGFVQADFDVFTIDGLEPRMEKIKNQIRPKLEAFGTELAPTLSSLTGDEMFVHTAKH 60 Query: 61 ARRTVHAPNDTWVAWGPNKRGYKALPHFQVGMFHSHLFIVFAIIYESSNKVIFAEALSRH 120 ARRTV+ PNDTW A+ +KRGYK LPHFQVG++ SHLF+ FAIIYES K FAE L + Sbjct: 61 ARRTVNPPNDTWAAFANSKRGYKKLPHFQVGLWESHLFVWFAIIYESPVKGAFAEELLKA 120 Query: 121 LGDVQAELPAGYFWSTDHLDPRGTAQADMDKSAFAGLSQRLKEVKKAEVTCGLRIDRNDP 180 ++ +P + WS DH P +++++ AF + +RL++VKKAE+ CG+ +DR DP Sbjct: 121 PTAIRENIPDSFKWSVDHTKPDTVSESELSDDAFTKMVERLRDVKKAELLCGITLDRKDP 180 Query: 181 VLADGDKLLNVIRQTFETLLPLYRMS 206 ++ DGDKLL+ I TF+TL+PLY+++ Sbjct: 181 LVQDGDKLLHTIEDTFKTLVPLYQLA 206 >Q2B4X1.1 Q2B4X1_9BACI Putative uncharacterized protein Length = 206 Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 106/206 (51%), Positives = 139/206 (67%) Query: 1 MPFQGFTAEDFDVFHIDGLEPRMEALIAGVRPKLNELGEELAPFLSILTGEEMFPHVAKH 60 MPF GF+ DFDVF IDGLE RM++L +RPKL ELG AP LS LTG+EM PHVAKH Sbjct: 1 MPFSGFSNADFDVFKIDGLEERMDSLKENIRPKLEELGSYFAPGLSALTGDEMHPHVAKH 60 Query: 61 ARRTVHAPNDTWVAWGPNKRGYKALPHFQVGMFHSHLFIVFAIIYESSNKVIFAEALSRH 120 ARRT++ PNDTWVA+ N RGYK LPHFQ+G++ SH+FI FA IYE+ NK F AL ++ Sbjct: 61 ARRTINPPNDTWVAFAANPRGYKMLPHFQIGLWESHVFIWFATIYEAPNKKEFGAALKKN 120 Query: 121 LGDVQAELPAGYFWSTDHLDPRGTAQADMDKSAFAGLSQRLKEVKKAEVTCGLRIDRNDP 180 L ++ + +P Y WS DH P + + +DKS + RL+ VKKAE+ CG+ I R + Sbjct: 121 LSEIYSSIPGSYVWSGDHTKPGAVSHSSLDKSELEAMFDRLENVKKAEILCGVNIPREEA 180 Query: 181 VLADGDKLLNVIRQTFETLLPLYRMS 206 + ++ L F+ LLPLY+M+ Sbjct: 181 IKLSAEEFLQKADSVFKNLLPLYKMA 206 >C0ZGG1.1 C0ZGG1_BREBN Putative uncharacterized protein Length = 211 Score = 230 bits (587), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 106/206 (51%), Positives = 147/206 (71%), Gaps = 1/206 (0%) Query: 1 MP-FQGFTAEDFDVFHIDGLEPRMEALIAGVRPKLNELGEELAPFLSILTGEEMFPHVAK 59 MP F GF EDFDVF IDGL+ RM+A+ +RPK L + APFLS+ TG+EMF H+AK Sbjct: 1 MPTFPGFRQEDFDVFAIDGLDARMDAIKTNIRPKFEVLSQHFAPFLSVATGDEMFTHIAK 60 Query: 60 HARRTVHAPNDTWVAWGPNKRGYKALPHFQVGMFHSHLFIVFAIIYESSNKVIFAEALSR 119 HARRTV+ P DTWVAW +KRGYK PHFQ+G++ +HLF+ +A+IYES +K I + A ++ Sbjct: 61 HARRTVNPPADTWVAWANDKRGYKKHPHFQIGLWGTHLFVWYAVIYESPSKEIISHAFNK 120 Query: 120 HLGDVQAELPAGYFWSTDHLDPRGTAQADMDKSAFAGLSQRLKEVKKAEVTCGLRIDRND 179 HL +V A +P + WS DH+ P T+Q ++ K+ L RL +VKKAE+ CG+ IDR+D Sbjct: 121 HLDEVLAMVPEHFHWSPDHMQPASTSQKELGKAGVKKLVDRLAQVKKAELLCGITIDRHD 180 Query: 180 PVLADGDKLLNVIRQTFETLLPLYRM 205 P+L+DG+ L++ + +TF L LY + Sbjct: 181 PILSDGEALVSRLEETFGVLSKLYTL 206 >A6CTB0.1 A6CTB0_9BACI Putative uncharacterized protein Length = 205 Score = 216 bits (551), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 99/205 (48%), Positives = 141/205 (68%) Query: 1 MPFQGFTAEDFDVFHIDGLEPRMEALIAGVRPKLNELGEELAPFLSILTGEEMFPHVAKH 60 M F GFT +DF++F I+GL+ RMEALI +RPKL+ LG AP LS +TG+EMFPHVAKH Sbjct: 1 MKFNGFTEDDFNIFTINGLDDRMEALIETIRPKLDALGHHFAPTLSTMTGDEMFPHVAKH 60 Query: 61 ARRTVHAPNDTWVAWGPNKRGYKALPHFQVGMFHSHLFIVFAIIYESSNKVIFAEALSRH 120 ARR+V+ P+DTWVA+ NKRGYK PHFQ+G++ +H+F+ FA+IYE+ +K + +AL ++ Sbjct: 61 ARRSVNPPDDTWVAFANNKRGYKKHPHFQIGLWETHVFVWFAMIYEAPDKEEYGKALEKN 120 Query: 121 LGDVQAELPAGYFWSTDHLDPRGTAQADMDKSAFAGLSQRLKEVKKAEVTCGLRIDRNDP 180 + + +P + WS DH ++MDK + L +RL+ VKKAE+ CG++I R Sbjct: 121 IDHIIKIIPRNFVWSGDHTKSEVLPFSEMDKEELSSLFKRLQTVKKAEILCGIQIPREQA 180 Query: 181 VLADGDKLLNVIRQTFETLLPLYRM 205 V GD+ + +I F LLPLY + Sbjct: 181 VKLSGDETIEIINDAFVKLLPLYNL 205 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.323 0.139 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,265,686,867 Number of extensions: 49621343 Number of successful extensions: 98418 Number of sequences better than 1.0e-05: 158 Number of HSP's gapped: 98343 Number of HSP's successfully gapped: 158 Length of query: 207 Length of database: 3,060,696,203 Length adjustment: 129 Effective length of query: 78 Effective length of database: 1,845,385,268 Effective search space: 143940050904 Effective search space used: 143940050904 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 128 (53.9 bits)