BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0547.0044.p (184 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q63AN1.1 Q63AN1_BACCZ Acetyltransferase, GNAT family EC=2.3.1.- 166 1e-39 C2VUK2.1 C2VUK2_BACCE Acetyltransferase 163 8e-39 C3C364.1 C3C364_BACTU Acetyltransferase 163 8e-39 Q6HI18.1 Q6HI18_BACHK Acetyltransferase, GNAT family EC=2.3.1.- 163 8e-39 C3LH15.1 C3LH15_BACAC Acetyltransferase, GNAT family 163 8e-39 >Q63AN1.1 Q63AN1_BACCZ Acetyltransferase, GNAT family EC=2.3.1.- Length = 187 Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 77/174 (44%), Positives = 109/174 (62%), Gaps = 2/174 (1%) Query: 13 TPDDIQSVYELFEESISDAFAQEGLAHLQDDIQSEVDNKQQKAASALDPEHSNTYFLVA- 71 DD++ ++ F I++ F EGL+ L DDI++E++ K+Q + D YFL+A Sbjct: 10 NSDDLEELHSFFRIVITNTFKDEGLSQLSDDIENEINTKKQYLKNDFDSNGEKRYFLLAI 69 Query: 72 -KLDGKVVGTISLSPCGEAIRTCTGNQLDDVGELGSVYILPSCQGLGIGSALIKAMLAYL 130 + K++GTI + P I +CTG L ++ E+G+V+ILP+ Q GIGS L+ AM L Sbjct: 70 DTNNDKIIGTIEVGPASTLINSCTGGLLKELYEIGTVFILPAYQRKGIGSFLLHAMFLTL 129 Query: 131 KGRGIEEFCLDSGYKRAQQRWLRKFGEPYTVVKDYWGPDSVHMVWLCKVRDYPV 184 RGI EFCLDSGYK+AQ W +KFGEP V+KDYWG S HM+W + D P+ Sbjct: 130 LSRGITEFCLDSGYKKAQSIWTKKFGEPSYVLKDYWGESSNHMIWKKSLHDTPI 183 >C2VUK2.1 C2VUK2_BACCE Acetyltransferase Length = 187 Score = 163 bits (412), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 76/172 (44%), Positives = 107/172 (62%), Gaps = 2/172 (1%) Query: 15 DDIQSVYELFEESISDAFAQEGLAHLQDDIQSEVDNKQQKAASALDPEHSNTYFLVA--K 72 DD++ ++ F I++ F EGL+ L DDI++E++ K+Q + D YFL+A Sbjct: 12 DDLEELHSFFRIVITNTFKDEGLSQLSDDIENEINTKKQYLKNDFDSNGEKRYFLLAIDT 71 Query: 73 LDGKVVGTISLSPCGEAIRTCTGNQLDDVGELGSVYILPSCQGLGIGSALIKAMLAYLKG 132 + K++GTI + P I +CTG L D+ E+G+V+ILP Q GIGS L+ M L Sbjct: 72 NNDKIIGTIEVGPASTLINSCTGGLLKDLYEIGTVFILPEYQKKGIGSFLLHTMFLTLLS 131 Query: 133 RGIEEFCLDSGYKRAQQRWLRKFGEPYTVVKDYWGPDSVHMVWLCKVRDYPV 184 RGI E+CLDSGYK+AQ W +KFGEP V+KDYWG S HM+W + D P+ Sbjct: 132 RGITEYCLDSGYKKAQSIWTKKFGEPSYVLKDYWGESSDHMIWKKSLYDTPI 183 >C3C364.1 C3C364_BACTU Acetyltransferase Length = 187 Score = 163 bits (412), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 77/172 (44%), Positives = 107/172 (62%), Gaps = 2/172 (1%) Query: 15 DDIQSVYELFEESISDAFAQEGLAHLQDDIQSEVDNKQQKAASALDPEHSNTYFLVA--K 72 DD++ ++ F I+D + EGL+ L DDI++E++ K+Q + D YFL+A Sbjct: 12 DDLEELHLFFRIVITDTYKDEGLSQLLDDIENEINMKKQYLKTDFDSNGEKRYFLLAIDT 71 Query: 73 LDGKVVGTISLSPCGEAIRTCTGNQLDDVGELGSVYILPSCQGLGIGSALIKAMLAYLKG 132 + K++GTI + P I +CTG L D+ E+G+V+ILP Q GIGS L+ M L Sbjct: 72 NNDKIIGTIEVGPASTLINSCTGGVLKDLYEIGTVFILPEYQRKGIGSLLLNTMFLTLLS 131 Query: 133 RGIEEFCLDSGYKRAQQRWLRKFGEPYTVVKDYWGPDSVHMVWLCKVRDYPV 184 RGI EFCLDSGYK+AQ W +KFGEP V+KDYWG S HM+W + D P+ Sbjct: 132 RGITEFCLDSGYKKAQSIWTKKFGEPSYVLKDYWGESSDHMIWKKSLHDTPI 183 >Q6HI18.1 Q6HI18_BACHK Acetyltransferase, GNAT family EC=2.3.1.- Length = 187 Score = 163 bits (412), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 76/172 (44%), Positives = 107/172 (62%), Gaps = 2/172 (1%) Query: 15 DDIQSVYELFEESISDAFAQEGLAHLQDDIQSEVDNKQQKAASALDPEHSNTYFLVA--K 72 DD++ ++ F I++ F EGL+ L DDI++E++ K+Q + D YFL+A Sbjct: 12 DDLEELHSFFRIVITNTFKDEGLSQLSDDIENEINTKKQYLKNDFDSNGEKRYFLLAIDT 71 Query: 73 LDGKVVGTISLSPCGEAIRTCTGNQLDDVGELGSVYILPSCQGLGIGSALIKAMLAYLKG 132 + K++GTI + P I +CTG L D+ E+G+V+ILP Q GIGS L+ M L Sbjct: 72 NNDKIIGTIEVGPASTLINSCTGGVLKDLYEIGTVFILPEYQKKGIGSFLLHTMFLTLLS 131 Query: 133 RGIEEFCLDSGYKRAQQRWLRKFGEPYTVVKDYWGPDSVHMVWLCKVRDYPV 184 RGI E+CLDSGYK+AQ W +KFGEP V+KDYWG S HM+W + D P+ Sbjct: 132 RGITEYCLDSGYKKAQSIWTKKFGEPSYVLKDYWGESSDHMIWKKSLYDTPI 183 >C3LH15.1 C3LH15_BACAC Acetyltransferase, GNAT family Length = 187 Score = 163 bits (412), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 76/172 (44%), Positives = 107/172 (62%), Gaps = 2/172 (1%) Query: 15 DDIQSVYELFEESISDAFAQEGLAHLQDDIQSEVDNKQQKAASALDPEHSNTYFLVA--K 72 DD++ ++ F I++ F EGL+ L DDI++E++ K+Q + D YFL+A Sbjct: 12 DDLEELHSFFRIVITNTFKDEGLSQLSDDIENEINTKKQYLKNDFDSNGEKRYFLLAIDT 71 Query: 73 LDGKVVGTISLSPCGEAIRTCTGNQLDDVGELGSVYILPSCQGLGIGSALIKAMLAYLKG 132 + K++GTI + P I +CTG L D+ E+G+V+ILP Q GIGS L+ M L Sbjct: 72 NNDKIIGTIEVGPASTLINSCTGGVLKDLYEIGTVFILPEYQKKGIGSFLLHTMFLTLLS 131 Query: 133 RGIEEFCLDSGYKRAQQRWLRKFGEPYTVVKDYWGPDSVHMVWLCKVRDYPV 184 RGI E+CLDSGYK+AQ W +KFGEP V+KDYWG S HM+W + D P+ Sbjct: 132 RGITEYCLDSGYKKAQSIWTKKFGEPSYVLKDYWGESSDHMIWKKSLYDTPI 183 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.137 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,153,254,506 Number of extensions: 45527063 Number of successful extensions: 129444 Number of sequences better than 1.0e-05: 93 Number of HSP's gapped: 129516 Number of HSP's successfully gapped: 93 Length of query: 184 Length of database: 3,060,696,203 Length adjustment: 127 Effective length of query: 57 Effective length of database: 1,864,227,298 Effective search space: 106260955986 Effective search space used: 106260955986 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 127 (53.5 bits)