BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0547.0014.p (378 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KJ03.1 B3KJ03_9BACI Peptidase M29 aminopeptidase II 649 0.0 B1DHP7.1 B1DHP7_9BACL Peptidase M29 aminopeptidase II 583 e-165 C2MRZ0.1 C2MRZ0_BACCE Aminopeptidase 504 e-141 Q816Y2.1 Q816Y2_BACCR Aminopeptidase EC=3.4.11.- 503 e-140 B7H742.1 B7H742_BACC4 Putative aminopeptidase 503 e-140 >B3KJ03.1 B3KJ03_9BACI Peptidase M29 aminopeptidase II Length = 371 Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust. Identities = 303/358 (84%), Positives = 333/358 (93%) Query: 8 MKDPRIQKLAENLVGYSVNVQPGENVLVEMIGSERDLIKAVVEEVGKAGGHAFVQLTDRT 67 M+DPRIQKLA+NLV YSV++QPGENVL+EMIGSERDL+ A++EEV K GG FVQLTDRT Sbjct: 1 MRDPRIQKLAQNLVNYSVDMQPGENVLIEMIGSERDLLNAIIEEVSKGGGRPFVQLTDRT 60 Query: 68 VLRSMLQYATREGLEAWAEIDLNRMKQMDCYIGIRAGENVNDLSDVPEENMKLYNSLYSH 127 V R+ML+ A +E LE WAE+DL RMK+MDCYIGIRAGENVND++DVPEENMKLYN+LYSH Sbjct: 61 VQRAMLKNANKEQLELWAELDLERMKKMDCYIGIRAGENVNDMADVPEENMKLYNALYSH 120 Query: 128 PVHSEQRVKHTKWVVLRYPNASMAQLANTTTEAFEDFYFEVCNLDYAKMDRAQDALAELM 187 PVHSE+RVK TKWVVLRYPNASMAQLANT+TEAFEDFYF+VCNLDY+KMDRAQD LAELM Sbjct: 121 PVHSEERVKRTKWVVLRYPNASMAQLANTSTEAFEDFYFDVCNLDYSKMDRAQDPLAELM 180 Query: 188 RRTDKVRISGPGTELSFSIKGIGAEKCSGHRNIPDGEVYSAPVRDSVNGTISYNAATIYN 247 R TDKVRI GPGT+LSFSIK IGAEKCSG +NIPDGEVY+APVRDSVNGTI+YN T+YN Sbjct: 181 RNTDKVRIVGPGTDLSFSIKNIGAEKCSGQKNIPDGEVYTAPVRDSVNGTIAYNTPTLYN 240 Query: 248 GVTFENVKFKFENGKIVEATSNDPVRLNEILDSDEGARHIGEFAIGFNPYILHPMKDILF 307 GVTFEN+KF+FENGKIVEAT +D RLNEILDSDEGAR+IGEFAIGFNPYIL PMKDILF Sbjct: 241 GVTFENIKFRFENGKIVEATGSDTKRLNEILDSDEGARYIGEFAIGFNPYILTPMKDILF 300 Query: 308 DEKIAGSLHFTPGQAYDVTDNGNRSSIHWDLVLIQRPEYGGGEIYFDDVLIRKDGIFV 365 DEKIAGSLHFTPGQAYDVTDNGNRSSIHWDLVLIQRPEYGGGEIYFDD LIRKDG+FV Sbjct: 301 DEKIAGSLHFTPGQAYDVTDNGNRSSIHWDLVLIQRPEYGGGEIYFDDRLIRKDGLFV 358 >B1DHP7.1 B1DHP7_9BACL Peptidase M29 aminopeptidase II Length = 371 Score = 583 bits (1504), Expect = e-165, Method: Compositional matrix adjust. Identities = 268/358 (74%), Positives = 314/358 (87%) Query: 8 MKDPRIQKLAENLVGYSVNVQPGENVLVEMIGSERDLIKAVVEEVGKAGGHAFVQLTDRT 67 M+D R+QKLA NL GYS++VQPG+NVL+++IG E +L K ++EEV K GG FV+L+DR+ Sbjct: 1 MRDARLQKLAANLAGYSIDVQPGDNVLIDLIGLELELGKCLIEEVTKRGGRPFVELSDRS 60 Query: 68 VLRSMLQYATREGLEAWAEIDLNRMKQMDCYIGIRAGENVNDLSDVPEENMKLYNSLYSH 127 VLR+ML +AT+E +E WA+ DL RM++M YIG+R+G NVN+LSDVP+E M+LY LY+H Sbjct: 61 VLRTMLTHATKEQIELWAKHDLERMEKMQGYIGVRSGSNVNELSDVPKEKMRLYEQLYTH 120 Query: 128 PVHSEQRVKHTKWVVLRYPNASMAQLANTTTEAFEDFYFEVCNLDYAKMDRAQDALAELM 187 PVH E+RVK TKWVVLRYP SMAQLAN +TEAFEDFYF+VCNLDYAKMDRAQD L LM Sbjct: 121 PVHMEERVKRTKWVVLRYPTPSMAQLANMSTEAFEDFYFDVCNLDYAKMDRAQDPLQALM 180 Query: 188 RRTDKVRISGPGTELSFSIKGIGAEKCSGHRNIPDGEVYSAPVRDSVNGTISYNAATIYN 247 RTDKVRI PGT+L+FSIKGIGA+KCSG RNIPDGEV+SAPVRDSVNG I+YN+ ++Y+ Sbjct: 181 SRTDKVRIVSPGTDLTFSIKGIGAKKCSGQRNIPDGEVFSAPVRDSVNGVITYNSPSVYS 240 Query: 248 GVTFENVKFKFENGKIVEATSNDPVRLNEILDSDEGARHIGEFAIGFNPYILHPMKDILF 307 G TF+N+ F FENGKIV ATSND +LNEILDSDEGAR++GEFAIGFNPYILHPM DILF Sbjct: 241 GTTFQNISFTFENGKIVNATSNDTKKLNEILDSDEGARYVGEFAIGFNPYILHPMNDILF 300 Query: 308 DEKIAGSLHFTPGQAYDVTDNGNRSSIHWDLVLIQRPEYGGGEIYFDDVLIRKDGIFV 365 DEKIAGSLHFTPGQAY+ TDNGNRSSIHWDLVLIQRPEYGGGEIYFDDVLIRKDG+FV Sbjct: 301 DEKIAGSLHFTPGQAYEETDNGNRSSIHWDLVLIQRPEYGGGEIYFDDVLIRKDGVFV 358 >C2MRZ0.1 C2MRZ0_BACCE Aminopeptidase Length = 371 Score = 504 bits (1297), Expect = e-141, Method: Compositional matrix adjust. Identities = 240/358 (67%), Positives = 283/358 (79%) Query: 8 MKDPRIQKLAENLVGYSVNVQPGENVLVEMIGSERDLIKAVVEEVGKAGGHAFVQLTDRT 67 MKDPRI+KLA NL+ YS+ +Q GE VL+E G +++L+ A+V+E AGG FV L D Sbjct: 1 MKDPRIEKLAYNLINYSIRLQKGEKVLIENFGLQKELVTALVKEAYAAGGFPFVSLKDHQ 60 Query: 68 VLRSMLQYATREGLEAWAEIDLNRMKQMDCYIGIRAGENVNDLSDVPEENMKLYNSLYSH 127 V RS+L AT E E A + N MK MD YIG+R+G+N+N+ +DVP E M+++ Sbjct: 61 VDRSLLMGATEEHFEQIAAYEANVMKDMDAYIGLRSGDNINEQADVPSERMQIHGQTVGK 120 Query: 128 PVHSEQRVKHTKWVVLRYPNASMAQLANTTTEAFEDFYFEVCNLDYAKMDRAQDALAELM 187 VH + RV T+WVVLRYPNASMAQLA +TEAFEDFYFEVCNLDY KMD+A D+L LM Sbjct: 121 KVHRDIRVPKTRWVVLRYPNASMAQLAKMSTEAFEDFYFEVCNLDYGKMDKAMDSLVTLM 180 Query: 188 RRTDKVRISGPGTELSFSIKGIGAEKCSGHRNIPDGEVYSAPVRDSVNGTISYNAATIYN 247 +TDKVR++GPGT+L+FSIK I A KCSGH NIPDGEVYSAPVRDSVNGT+SYN + YN Sbjct: 181 NKTDKVRLTGPGTDLTFSIKDIPAIKCSGHLNIPDGEVYSAPVRDSVNGTVSYNTPSPYN 240 Query: 248 GVTFENVKFKFENGKIVEATSNDPVRLNEILDSDEGARHIGEFAIGFNPYILHPMKDILF 307 G TFENV+ KFENG+IVEAT+ND R+N+I D+DEGAR++GEFAIG NPYILHPM DILF Sbjct: 241 GYTFENVQLKFENGQIVEATANDSERINKIFDTDEGARYVGEFAIGVNPYILHPMGDILF 300 Query: 308 DEKIAGSLHFTPGQAYDVTDNGNRSSIHWDLVLIQRPEYGGGEIYFDDVLIRKDGIFV 365 DEKI GS HFTPGQAYD NGN S+IHWDLV IQRPEYGGGEIYFDDVLIRKDG FV Sbjct: 301 DEKIDGSFHFTPGQAYDDAWNGNNSNIHWDLVCIQRPEYGGGEIYFDDVLIRKDGRFV 358 >Q816Y2.1 Q816Y2_BACCR Aminopeptidase EC=3.4.11.- Length = 371 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 240/358 (67%), Positives = 283/358 (79%) Query: 8 MKDPRIQKLAENLVGYSVNVQPGENVLVEMIGSERDLIKAVVEEVGKAGGHAFVQLTDRT 67 MKDPRI+KLA NL+ YS+ +Q GE VL+E G +++L+ A+V+E AGG FV L D Sbjct: 1 MKDPRIEKLAYNLINYSIRLQKGEKVLIENFGLQKELVTALVKEAYAAGGFPFVSLKDHQ 60 Query: 68 VLRSMLQYATREGLEAWAEIDLNRMKQMDCYIGIRAGENVNDLSDVPEENMKLYNSLYSH 127 V RS+L AT E E A + + MK MD YIG+R+G+N+N+ +DVP E MK++ Sbjct: 61 VDRSLLMGATEEHFEQIAAYEASVMKDMDAYIGLRSGDNINEQADVPSERMKVHGQTVGK 120 Query: 128 PVHSEQRVKHTKWVVLRYPNASMAQLANTTTEAFEDFYFEVCNLDYAKMDRAQDALAELM 187 VH + RV T+WVVLRYPNASMAQLA +TEAFEDFYFEVCNLDY KMD+A D+L LM Sbjct: 121 KVHRDIRVPKTRWVVLRYPNASMAQLAKMSTEAFEDFYFEVCNLDYGKMDKAMDSLVTLM 180 Query: 188 RRTDKVRISGPGTELSFSIKGIGAEKCSGHRNIPDGEVYSAPVRDSVNGTISYNAATIYN 247 +TDKVR++GPGT+L+FSIK I A KCSGH NIPDGEVYSAPVRDSVNGT+SYN + YN Sbjct: 181 NKTDKVRLTGPGTDLTFSIKDIPAIKCSGHLNIPDGEVYSAPVRDSVNGTVSYNTPSPYN 240 Query: 248 GVTFENVKFKFENGKIVEATSNDPVRLNEILDSDEGARHIGEFAIGFNPYILHPMKDILF 307 G TFENV+ KFENG+IVEAT+ND R+N+I D+DEGAR++GEFAIG NPYILHPM DILF Sbjct: 241 GYTFENVQLKFENGQIVEATANDSERINKIFDTDEGARYVGEFAIGVNPYILHPMGDILF 300 Query: 308 DEKIAGSLHFTPGQAYDVTDNGNRSSIHWDLVLIQRPEYGGGEIYFDDVLIRKDGIFV 365 DEKI GS HFTPGQAYD NGN S+IHWDLV IQRPEYGGGEIYFDDVLIRKDG FV Sbjct: 301 DEKIDGSFHFTPGQAYDDAWNGNNSNIHWDLVCIQRPEYGGGEIYFDDVLIRKDGRFV 358 >B7H742.1 B7H742_BACC4 Putative aminopeptidase Length = 371 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 240/358 (67%), Positives = 283/358 (79%) Query: 8 MKDPRIQKLAENLVGYSVNVQPGENVLVEMIGSERDLIKAVVEEVGKAGGHAFVQLTDRT 67 MKDPRI+KLA NL+ YS+ +Q GE VL+E G +++L+ A+V+E AGG FV L D Sbjct: 1 MKDPRIEKLAYNLINYSIRLQKGEKVLIENFGLQKELVTALVKEAYAAGGFPFVSLKDHQ 60 Query: 68 VLRSMLQYATREGLEAWAEIDLNRMKQMDCYIGIRAGENVNDLSDVPEENMKLYNSLYSH 127 V RS+L AT E E A + + MK MD YIG+R+G+N+N+ +DVP E MK++ Sbjct: 61 VDRSLLMGATEEHFEQIAAYEASVMKDMDAYIGLRSGDNINEQADVPSERMKVHGQTVGK 120 Query: 128 PVHSEQRVKHTKWVVLRYPNASMAQLANTTTEAFEDFYFEVCNLDYAKMDRAQDALAELM 187 VH + RV T+WVVLRYPNASMAQLA +TEAFEDFYFEVCNLDY KMD+A D+L LM Sbjct: 121 KVHRDIRVPKTRWVVLRYPNASMAQLAKMSTEAFEDFYFEVCNLDYGKMDKAMDSLVTLM 180 Query: 188 RRTDKVRISGPGTELSFSIKGIGAEKCSGHRNIPDGEVYSAPVRDSVNGTISYNAATIYN 247 +TDKVR++GPGT+L+FSIK I A KCSGH NIPDGEVYSAPVRDSVNGT+SYN + YN Sbjct: 181 NKTDKVRLTGPGTDLTFSIKDIPAIKCSGHLNIPDGEVYSAPVRDSVNGTVSYNTPSPYN 240 Query: 248 GVTFENVKFKFENGKIVEATSNDPVRLNEILDSDEGARHIGEFAIGFNPYILHPMKDILF 307 G TFENV+ KFENG+IVEAT+ND R+N+I D+DEGAR++GEFAIG NPYILHPM DILF Sbjct: 241 GYTFENVQLKFENGQIVEATANDSERINKIFDTDEGARYVGEFAIGVNPYILHPMGDILF 300 Query: 308 DEKIAGSLHFTPGQAYDVTDNGNRSSIHWDLVLIQRPEYGGGEIYFDDVLIRKDGIFV 365 DEKI GS HFTPGQAYD NGN S+IHWDLV IQRPEYGGGEIYFDDVLIRKDG FV Sbjct: 301 DEKIDGSFHFTPGQAYDDAWNGNNSNIHWDLVCIQRPEYGGGEIYFDDVLIRKDGRFV 358 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,248,212,322 Number of extensions: 96305817 Number of successful extensions: 245336 Number of sequences better than 1.0e-05: 586 Number of HSP's gapped: 244754 Number of HSP's successfully gapped: 586 Length of query: 378 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 241 Effective length of database: 1,770,017,148 Effective search space: 426574132668 Effective search space used: 426574132668 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)