BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0547.0009.p
         (121 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KJ08.1 B3KJ08_9BACI Putative uncharacterized protein                224   3e-57
B1DHP3.1 B1DHP3_9BACL Putative uncharacterized protein                155   1e-36
A1HQ70.1 A1HQ70_9FIRM Putative uncharacterized protein                118   2e-25
B7B0L8.1 B7B0L8_9FIRM Putative uncharacterized protein                117   4e-25
B0TEI4.1 B0TEI4_HELMI Putative uncharacterized protein                115   1e-24

>B3KJ08.1 B3KJ08_9BACI Putative uncharacterized protein
          Length = 128

 Score =  224 bits (570), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 111/121 (91%), Positives = 116/121 (95%)

Query: 1   MAEQLQLEMGNIRISNDVVSKIAGLAALETPGIAAMSGGLSEGWAKRLSGKNVQKGVTVE 60
           M EQLQL+ G IRIS+DVVSKIAGLAALETPGIAAMSGGLSEGWAKRLSGKNVQKGVTVE
Sbjct: 1   MTEQLQLDNGLIRISDDVVSKIAGLAALETPGIAAMSGGLSEGWAKRLSGKNVQKGVTVE 60

Query: 61  VGQLEAAVDLRIIVLYETPIHEVCRMLQQNVREAVESMTGLHIVEVNVKVEGVAFKNDEI 120
           VGQLEAA+DLRIIVLYETPIHEVCRMLQQNVREAVESMTGL +VEVNVKVEGVAFK+DEI
Sbjct: 61  VGQLEAAIDLRIIVLYETPIHEVCRMLQQNVREAVESMTGLRVVEVNVKVEGVAFKDDEI 120

Query: 121 S 121
            
Sbjct: 121 D 121


>B1DHP3.1 B1DHP3_9BACL Putative uncharacterized protein
          Length = 127

 Score =  155 bits (392), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/115 (78%), Positives = 102/115 (88%)

Query: 7   LEMGNIRISNDVVSKIAGLAALETPGIAAMSGGLSEGWAKRLSGKNVQKGVTVEVGQLEA 66
           L+ G IRIS+DVV+ IAGLAALETPGIA MSGG+SEG AKRLSGKNVQKGV+VEVGQLEA
Sbjct: 5   LQTGIIRISDDVVATIAGLAALETPGIAGMSGGISEGLAKRLSGKNVQKGVSVEVGQLEA 64

Query: 67  AVDLRIIVLYETPIHEVCRMLQQNVREAVESMTGLHIVEVNVKVEGVAFKNDEIS 121
           A+DLR+IV Y  PI EVCR LQ NVRE+VE+MTGL++VEVNVKVEGVAFK +E S
Sbjct: 65  AIDLRVIVHYGIPIQEVCRQLQLNVRESVENMTGLNVVEVNVKVEGVAFKEEETS 119


>A1HQ70.1 A1HQ70_9FIRM Putative uncharacterized protein
          Length = 134

 Score =  118 bits (296), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 65/117 (55%), Positives = 86/117 (73%), Gaps = 4/117 (3%)

Query: 8   EMGNIRISNDVVSKIAGLAALETPGIAAMSGGLSEGWAKRLSGKNVQKGVTVEVGQLEAA 67
           ++G+IRI+++VV  IAGLAA E PG+A MSGGL  G A+ L  KN+ KGV VEVG+ EAA
Sbjct: 15  DVGSIRIADEVVGIIAGLAATEVPGVAGMSGGLVGGIAEMLGKKNLSKGVKVEVGEREAA 74

Query: 68  VDLRIIVLYETPIHEVCRMLQQNVREAVESMTGLHIVEVNVKVEGVAF----KNDEI 120
           VDL IIV Y   I +V   +Q+NV+ A+ESMTGL +VEVN+ V+GV F    K++E+
Sbjct: 75  VDLYIIVEYGVRIPDVALRVQENVKRAIESMTGLDVVEVNIHVQGVGFAQEGKDEEV 131


>B7B0L8.1 B7B0L8_9FIRM Putative uncharacterized protein
          Length = 162

 Score =  117 bits (292), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 65/117 (55%), Positives = 84/117 (71%), Gaps = 5/117 (4%)

Query: 9   MGNIRISNDVVSKIAGLAALETPGIAAMSGGLSEGWAKRLSGKNVQKGVTVEVGQLEAAV 68
           +G IRI+++VVS IAGLAA E  GIA MSGG++ G A+ L  KN  KGV VEVG+ EAAV
Sbjct: 43  LGAIRIADEVVSIIAGLAATEVDGIAGMSGGIAGGIAEMLGRKNFAKGVKVEVGEKEAAV 102

Query: 69  DLRIIVLYETPIHEVCRMLQQNVREAVESMTGLHIVEVNVKVEGVAF-----KNDEI 120
           DL IIV Y   I ++   +Q+NV++A+E+MTGL +VEVNV V+GV F     K DE+
Sbjct: 103 DLFIIVKYGVRIPDIALAVQENVKQAIETMTGLSVVEVNVHVQGVGFPEETTKQDEV 159


>B0TEI4.1 B0TEI4_HELMI Putative uncharacterized protein
          Length = 132

 Score =  115 bits (289), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/112 (52%), Positives = 84/112 (75%)

Query: 8   EMGNIRISNDVVSKIAGLAALETPGIAAMSGGLSEGWAKRLSGKNVQKGVTVEVGQLEAA 67
           ++G++RI+ +VV+ IAGLAA E  G+AAMSGGL  G A+ L  KN+ +GV VEVG+ EAA
Sbjct: 13  DIGHVRIAQEVVATIAGLAATEVEGVAAMSGGLGGGIAEMLGRKNLTRGVKVEVGEREAA 72

Query: 68  VDLRIIVLYETPIHEVCRMLQQNVREAVESMTGLHIVEVNVKVEGVAFKNDE 119
           +D+ IIV + + I EV + +Q+NV+ ++ESMTGL +VEVNV ++GV F   E
Sbjct: 73  IDMNIIVNFGSRIPEVAKRVQENVKRSIESMTGLTVVEVNVHIQGVNFPTPE 124


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.315    0.132    0.355 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 621,317,975
Number of extensions: 21545361
Number of successful extensions: 131939
Number of sequences better than 1.0e-05: 838
Number of HSP's gapped: 131641
Number of HSP's successfully gapped: 838
Length of query: 121
Length of database: 3,060,696,203
Length adjustment: 87
Effective length of query: 34
Effective length of database: 2,241,067,898
Effective search space: 76196308532
Effective search space used: 76196308532
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 126 (53.1 bits)