BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0547.0001.p
         (87 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KJ17.1 B3KJ17_9BACI Putative uncharacterized protein                154   2e-36
B1DHN5.1 B1DHN5_9BACL Putative uncharacterized protein                135   1e-30
Q4MTB8.1 Q4MTB8_BACCE Putative uncharacterized protein                 85   2e-15
B1EW48.1 B1EW48_BACAN Putative uncharacterized protein                 85   2e-15
B0Q7C5.1 B0Q7C5_BACAN Putative uncharacterized protein                 85   2e-15

>B3KJ17.1 B3KJ17_9BACI Putative uncharacterized protein
          Length = 87

 Score =  154 bits (390), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 69/86 (80%), Positives = 82/86 (95%)

Query: 1  MFAERTGYIVWVSDVKAARNLEKYGTLHYVSRKMHYAVMYVNAERAEEVMKNVRRLSYVR 60
          M AERTG+I+WVSDVKAARNLEKYG++HY+SR+MHY VMYVNA+RAEE MKN+RRLSYVR
Sbjct: 1  MLAERTGFIIWVSDVKAARNLEKYGSVHYISRRMHYVVMYVNADRAEETMKNIRRLSYVR 60

Query: 61 KIERSYRNELKTEYTSNGPDKSRYYG 86
          KIERSYRNE+KTEY+S GPDK+++YG
Sbjct: 61 KIERSYRNEIKTEYSSKGPDKAKFYG 86


>B1DHN5.1 B1DHN5_9BACL Putative uncharacterized protein
          Length = 88

 Score =  135 bits (340), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 60/87 (68%), Positives = 75/87 (86%)

Query: 1  MFAERTGYIVWVSDVKAARNLEKYGTLHYVSRKMHYAVMYVNAERAEEVMKNVRRLSYVR 60
          +  ERTGYI+WVSD+KAAR LEKYGT+HY+SRKMHY V+Y+NAERAEE +K + RL +VR
Sbjct: 2  LLPERTGYIIWVSDLKAARTLEKYGTVHYMSRKMHYVVIYMNAERAEEAVKTISRLPFVR 61

Query: 61 KIERSYRNELKTEYTSNGPDKSRYYGL 87
          K+ERSYRNELKTEYT +  DK+R+Y +
Sbjct: 62 KVERSYRNELKTEYTKDAEDKTRFYSM 88


>Q4MTB8.1 Q4MTB8_BACCE Putative uncharacterized protein
          Length = 92

 Score = 84.7 bits (208), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 62/86 (72%)

Query: 1  MFAERTGYIVWVSDVKAARNLEKYGTLHYVSRKMHYAVMYVNAERAEEVMKNVRRLSYVR 60
          MF +R   IV++  +K A+ L KYG +HY+S+++ YAV+Y + E+ E +M+ + +L +V+
Sbjct: 5  MFGQRQSMIVYLHSLKHAKILRKYGNIHYISKRLKYAVVYCDMEQIEHMMQKLNKLPFVK 64

Query: 61 KIERSYRNELKTEYTSNGPDKSRYYG 86
          KIE+SYR  LKTE+ ++ PD+++ Y 
Sbjct: 65 KIEQSYRPYLKTEFENSRPDRAKEYD 90


>B1EW48.1 B1EW48_BACAN Putative uncharacterized protein
          Length = 92

 Score = 84.7 bits (208), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 62/86 (72%)

Query: 1  MFAERTGYIVWVSDVKAARNLEKYGTLHYVSRKMHYAVMYVNAERAEEVMKNVRRLSYVR 60
          MF +R   IV++  +K A+ L KYG +HY+S+++ YAV+Y + E+ E +M+ + +L +V+
Sbjct: 5  MFGQRQSMIVYLHSLKHAKILRKYGNIHYISKRLKYAVVYCDMEQIEHMMQKLNKLPFVK 64

Query: 61 KIERSYRNELKTEYTSNGPDKSRYYG 86
          KIE+SYR  LKTE+ ++ PD+++ Y 
Sbjct: 65 KIEQSYRPYLKTEFENSRPDRAKEYD 90


>B0Q7C5.1 B0Q7C5_BACAN Putative uncharacterized protein
          Length = 92

 Score = 84.7 bits (208), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 62/86 (72%)

Query: 1  MFAERTGYIVWVSDVKAARNLEKYGTLHYVSRKMHYAVMYVNAERAEEVMKNVRRLSYVR 60
          MF +R   IV++  +K A+ L KYG +HY+S+++ YAV+Y + E+ E +M+ + +L +V+
Sbjct: 5  MFGQRQSMIVYLHSLKHAKILRKYGNIHYISKRLKYAVVYCDMEQIEHMMQKLNKLPFVK 64

Query: 61 KIERSYRNELKTEYTSNGPDKSRYYG 86
          KIE+SYR  LKTE+ ++ PD+++ Y 
Sbjct: 65 KIEQSYRPYLKTEFENSRPDRAKEYD 90


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.318    0.131    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 487,722,060
Number of extensions: 14420682
Number of successful extensions: 41337
Number of sequences better than 1.0e-05: 109
Number of HSP's gapped: 41331
Number of HSP's successfully gapped: 109
Length of query: 87
Length of database: 3,060,696,203
Length adjustment: 57
Effective length of query: 30
Effective length of database: 2,523,698,348
Effective search space: 75710950440
Effective search space used: 75710950440
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 125 (52.8 bits)