BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0545.0069.p (151 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DEZ6.1 B1DEZ6_9BACL Lactoylglutathione lyase and related lyase 201 2e-50 Q8RCQ6.1 Q8RCQ6_THETN Lactoylglutathione lyase and related lyases 152 1e-35 B9MP68.1 B9MP68_ANATD Putative uncharacterized protein 147 4e-34 C1PQJ6.1 C1PQJ6_ALIAC Methylmalonyl-CoA epimerase EC=5.1.99.1 146 5e-34 B5YEP9.1 B5YEP9_DICT6 Lactoylglutathione lyase and related lyases 146 6e-34 >B1DEZ6.1 B1DEZ6_9BACL Lactoylglutathione lyase and related lyase Length = 180 Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 98/146 (67%), Positives = 111/146 (76%) Query: 5 LGNHVITQIGILVNDIEKVSGAYADFFGLEKPDIVVTDTADLAQTRYNGGATEARAKLAF 64 +G +ITQIGILV+DIE VS AYA+FFG+EKP TDT D AQT + G ++ARAKLAF Sbjct: 35 IGTKMITQIGILVHDIEAVSEAYANFFGVEKPGWNWTDTPDKAQTEFQGEPSQARAKLAF 94 Query: 65 FDMGSLQLELIEPDHHPSTWRDYLNEHGEGPHHIAFVVEGMKEKIMLLEGKGFPLQQKGE 124 F+M SLQLELIEPD HPSTWR+YL EHGEGPHHIAFVVEGMKEKI ++E KG LQQKGE Sbjct: 95 FNMDSLQLELIEPDLHPSTWRNYLEEHGEGPHHIAFVVEGMKEKIAIMESKGMKLQQKGE 154 Query: 125 YTGGRYAYMDTFXXXXXXXXXXXNDN 150 YTGGRYAY D+ ND Sbjct: 155 YTGGRYAYFDSVPQLKVLIELLENDK 180 >Q8RCQ6.1 Q8RCQ6_THETN Lactoylglutathione lyase and related lyases Length = 150 Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 73/126 (57%), Positives = 94/126 (74%) Query: 11 TQIGILVNDIEKVSGAYADFFGLEKPDIVVTDTADLAQTRYNGGATEARAKLAFFDMGSL 70 QIGI+V DIE+ YA+FFG+EKP TD A T++NG T+ARAKLAFF++G L Sbjct: 12 VQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPL 71 Query: 71 QLELIEPDHHPSTWRDYLNEHGEGPHHIAFVVEGMKEKIMLLEGKGFPLQQKGEYTGGRY 130 QLELIEPD +PSTWR++L+++GEG HHIAFVV+ M K+ L KG + QKG++ GGRY Sbjct: 72 QLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDFEGGRY 131 Query: 131 AYMDTF 136 AY+DT Sbjct: 132 AYIDTL 137 >B9MP68.1 B9MP68_ANATD Putative uncharacterized protein Length = 151 Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 70/132 (53%), Positives = 94/132 (71%), Gaps = 1/132 (0%) Query: 5 LGNHVITQIGILVNDIEKVSGAYADFFGLEKPDIVVTDTADLAQTRYNGGATEARAKLAF 64 LG V+ QIGI+V DIEK + +A FFG+E P I+ T+ + T Y G T ARAKLAF Sbjct: 6 LGTDVVVQIGIIVKDIEKTAKDFAQFFGVEVPQIIETEEYEKTHTEYRGKPTNARAKLAF 65 Query: 65 F-DMGSLQLELIEPDHHPSTWRDYLNEHGEGPHHIAFVVEGMKEKIMLLEGKGFPLQQKG 123 F + ++++ELIEPD +PSTWR++L+ HGEG HHI V+ M EKI L+ +G + QKG Sbjct: 66 FRNFKNIEIELIEPDENPSTWREFLDTHGEGIHHIGVFVKNMDEKIENLKKEGIEVVQKG 125 Query: 124 EYTGGRYAYMDT 135 +YTGGRYAYM++ Sbjct: 126 DYTGGRYAYMES 137 >C1PQJ6.1 C1PQJ6_ALIAC Methylmalonyl-CoA epimerase EC=5.1.99.1 Length = 152 Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 73/147 (49%), Positives = 88/147 (59%) Query: 5 LGNHVITQIGILVNDIEKVSGAYADFFGLEKPDIVVTDTADLAQTRYNGGATEARAKLAF 64 LG + QIGI+V DIE S A+A G + P T+ + A+T Y G T+ARAKLAF Sbjct: 6 LGTRRVAQIGIVVRDIEAASAAWAKLLGCDVPKWHWTEAYEEARTEYQGRPTKARAKLAF 65 Query: 65 FDMGSLQLELIEPDHHPSTWRDYLNEHGEGPHHIAFVVEGMKEKIMLLEGKGFPLQQKGE 124 F + +L +ELIEPD HPSTWR +L+EHGEG HH+AF VEGM L G L Q+GE Sbjct: 66 FRLENLDIELIEPDEHPSTWRAWLDEHGEGVHHVAFEVEGMAAHAEALTQAGLELVQRGE 125 Query: 125 YTGGRYAYMDTFXXXXXXXXXXXNDNN 151 YTGGRYAY D ND Sbjct: 126 YTGGRYAYFDGASSARAVIELLENDRR 152 >B5YEP9.1 B5YEP9_DICT6 Lactoylglutathione lyase and related lyases Length = 154 Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 66/133 (49%), Positives = 94/133 (70%), Gaps = 1/133 (0%) Query: 5 LGNHVITQIGILVNDIEKVSGAYADFFGLEKPDIVVTDTADLAQTRYNGGATEARAKLAF 64 LG V+ QIGI+V DIEK ++ F +EKP+I++TD + A T Y G T ARAKLAF Sbjct: 9 LGTDVVVQIGIIVKDIEKAVEEFSKIFNVEKPEIIITDIYEKAHTEYRGNPTPARAKLAF 68 Query: 65 F-DMGSLQLELIEPDHHPSTWRDYLNEHGEGPHHIAFVVEGMKEKIMLLEGKGFPLQQKG 123 F + ++++E IEPD +PSTWR++L++HGEG HH+AF V+G E + + G + QKG Sbjct: 69 FKNFKNVEIEFIEPDENPSTWREFLDKHGEGVHHLAFFVKGTDEVVERFKNHGIEVVQKG 128 Query: 124 EYTGGRYAYMDTF 136 +YTGGRY Y+++F Sbjct: 129 DYTGGRYTYLNSF 141 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.138 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 930,021,804 Number of extensions: 37520925 Number of successful extensions: 77960 Number of sequences better than 1.0e-05: 49 Number of HSP's gapped: 77994 Number of HSP's successfully gapped: 49 Length of query: 151 Length of database: 3,060,696,203 Length adjustment: 113 Effective length of query: 38 Effective length of database: 1,996,121,508 Effective search space: 75852617304 Effective search space used: 75852617304 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 125 (52.8 bits)