BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0545.0043.p (189 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1D9L5.1 B1D9L5_9BACL Putative uncharacterized protein 140 7e-32 B1DE83.1 B1DE83_9BACL Putative uncharacterized protein 139 1e-31 Q2BET6.1 Q2BET6_9BACI Putative uncharacterized protein 102 2e-20 B3KC52.1 B3KC52_9BACI Putative uncharacterized protein 91 4e-17 B1DFE1.1 B1DFE1_9BACL Putative uncharacterized protein 91 6e-17 >B1D9L5.1 B1D9L5_9BACL Putative uncharacterized protein Length = 227 Score = 140 bits (352), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 63/169 (37%), Positives = 101/169 (59%), Gaps = 3/169 (1%) Query: 1 MFLEQIWWPMMGTLQNLHPEYEVVDWRGRPYFVDLVWRPGQVKFAFEVKGYGPHVQNMDR 60 +FL+ +WWP++G ++LHPEYEV DW + FVD + P Q FA E G+ HV++MDR Sbjct: 40 LFLQNVWWPLLGNFEHLHPEYEVYDWNRKSQFVDFAYLPPQGMFAIECDGFQSHVKDMDR 99 Query: 61 TRYRQELNRETFLQIAGYRVVSIPYDDLEASPQLIISLIRTLVAPFI---SGNNAMEHFT 117 R+ LNR+TFL G++++ +DD++ P++ + L++ ++ I N A Sbjct: 100 ERFSYSLNRDTFLTGMGWKMIHFSFDDVQNHPEICMMLLKHVLGTHIIRGRQNVASLLVP 159 Query: 118 RLEREMIRLAVSRDGLIRPVDVVKELGVNLRTVRNMLQALCAKGRLRPV 166 ER+++R A G + P D+ G++ RT R LQ+L AKG L+P+ Sbjct: 160 SAERDILRFAFHMGGRVGPKDLSDHFGISFRTARKRLQSLSAKGMLKPI 208 >B1DE83.1 B1DE83_9BACL Putative uncharacterized protein Length = 223 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 66/180 (36%), Positives = 108/180 (60%), Gaps = 3/180 (1%) Query: 1 MFLEQIWWPMMGTLQNLHPEYEVVDWRGRPYFVDLVWRPGQVKFAFEVKGYGPHVQNMDR 60 + L+ +WWP+ G+ ++LHPEYEV DW + F+D + P KF E G+ HV++MDR Sbjct: 37 LILQNVWWPLFGSFEHLHPEYEVYDWNRKSQFLDFAFLPPYGKFGIECDGFQSHVKDMDR 96 Query: 61 TRYRQELNRETFLQIAGYRVVSIPYDDLEASPQLIISLIRTLVAP-FISGNNAMEHFTRL 119 ++ LNR+TFL+ G+ ++ +DD++ P++ L++ ++ P I + + L Sbjct: 97 EKFSYSLNRDTFLKGMGWTMIHFSFDDVQNRPEICRMLLQGIINPRLIHSAPSPDPVQLL 156 Query: 120 EREMIRLAVSRDGLIRPVDVVKELGVNLRTVRNMLQALCAKGRLRPVPTNSGRRVCRYEV 179 E+E++R A IRP D++ L V+ RT RN LQ L KG L+P+ SG ++ RYE+ Sbjct: 157 EKEILRYAFQLSRPIRPKDIIDYLQVDFRTARNKLQTLSNKGLLKPII--SGTQIRRYEI 214 >Q2BET6.1 Q2BET6_9BACI Putative uncharacterized protein Length = 243 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 100/180 (55%), Gaps = 4/180 (2%) Query: 1 MFLEQIWWPMMGTLQNLHPEYEVVDWRGRPYFVDLVW-RPGQVKFAFEVKGYGPHVQNMD 59 +FL+Q+WWP+ LHPEYE+ ++ ++D + RPG +K EV GYGPH++N+ Sbjct: 59 LFLKQVWWPVFYQFNYLHPEYEIDNYNDGKRYLDFAYIRPG-IKVCLEVDGYGPHLKNIS 117 Query: 60 RTRYRQELNRETFLQIAGYRVVSIPYDDLEASPQLIISLIRTLVAPFISGNNAMEHFTRL 119 R ++ L R+ L I + V+ +D ++ +P+ +++ ++ ++ + L Sbjct: 118 RWQFSDSLERQNQLVIDRWTVIRFSFDQVKENPRRCQQVVQQVIGRWMGDELDQTSLSFL 177 Query: 120 EREMIRLAVSRDGLIRPVDVVKELGVNLRTVRNMLQALCAKGRLRPVPTNSGRRVCRYEV 179 E+E++RL + + I P +V K L ++ +TV+ +L L K L +P + +R+ Y V Sbjct: 178 EKEVLRLVIRKGEDISPKEVEKYLKLSAKTVKKVLSQLVEKKML--IPASGTQRIRSYRV 235 >B3KC52.1 B3KC52_9BACI Putative uncharacterized protein Length = 215 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 4/175 (2%) Query: 2 FLEQIWWPMMGTLQNLHPEYEVVDWRGRPYFVDLVWRPGQVKFAFEVKGYGPHVQNMDRT 61 FL +W+P +G +LHPE+EV D+ ++DL + PG + E++GYGPH +++D Sbjct: 39 FLRSVWFPAIGHFNDLHPEWEVRDFSNGYRYLDLAYMPGDARGGIEIQGYGPHARDLDVR 98 Query: 62 RYRQELNRETFLQIAGYRVVSIPYDDLEASPQLIISLIRTLVAPFISGNNAMEHFTRLER 121 R++ R L + G+ + I Y + P+ LI + V F++ + + LE Sbjct: 99 RFKDLCRRHCLLALDGWTFLPIAYPSIVEEPKQCQQLILSFVGRFVA-TDVPASLSWLEA 157 Query: 122 EMIRLAVSRDGLIRPVDVVKELGVNLRTVRNMLQALCAKGRLRPVPTNSGRRVCR 176 E +R A I P+++ L V+ R R +L L LR + SG + R Sbjct: 158 EAVRFARRLLRPITPLELANHLRVSDRHTRRLLHKLV---ELRILDIASGEQRAR 209 >B1DFE1.1 B1DFE1_9BACL Putative uncharacterized protein Length = 225 Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 91/178 (51%), Gaps = 11/178 (6%) Query: 1 MFLEQIWWPMMGTLQNLHPEYEVVDWRGRPYFVDLVWRPGQVKFAFEVKGYGPHVQNMDR 60 +FL+ +W+ +NLHPEY+V D+R ++D + +K + E+ G+GPH+ R Sbjct: 36 LFLKNVWFTAFRNFENLHPEYKVADFRDGARYLDFAYLKYPLKLSIEIDGFGPHLSQASR 95 Query: 61 TRYRQELNRETFLQIAGYRVVSIPYDDLEASPQLIISLIRTLVAPFISGNNAMEHFTR-- 118 + + R+ L I G+R++ YDD+ P++ +++ ++ ++ H+T Sbjct: 96 NHFSDDRIRQNHLVIDGWRILRFSYDDICDRPRMCEQIVQQFMSTWLD-----RHYTERS 150 Query: 119 ----LEREMIRLAVSRDGLIRPVDVVKELGVNLRTVRNMLQALCAKGRLRPVPTNSGR 172 ++ E++RLA+ + +R +V L V++ T R++L+ L L P R Sbjct: 151 SDAIIQHEVLRLALRTEKPLRAREVSTYLTVHIETARSILRELAKLNLLLPCGGGKQR 208 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.326 0.141 0.443 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,125,795,196 Number of extensions: 42986470 Number of successful extensions: 120871 Number of sequences better than 1.0e-05: 8 Number of HSP's gapped: 120869 Number of HSP's successfully gapped: 8 Length of query: 189 Length of database: 3,060,696,203 Length adjustment: 128 Effective length of query: 61 Effective length of database: 1,854,806,283 Effective search space: 113143183263 Effective search space used: 113143183263 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 127 (53.5 bits)