BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0545.0010.p (165 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KFX8.1 B3KFX8_9BACI HAD superfamily (Subfamily IIIA) phosphata... 266 3e-70 B1DBJ8.1 B1DBJ8_9BACL HAD superfamily (Subfamily IIIA) phosphata... 218 1e-55 Q9KD95.1 Q9KD95_BACHD BH1322 protein 170 3e-41 B4BLW9.1 B4BLW9_9BACI HAD superfamily (Subfamily IIIA) phosphata... 168 1e-40 A4IR53.1 A4IR53_GEOTN Putative uncharacterized protein 168 1e-40 >B3KFX8.1 B3KFX8_9BACI HAD superfamily (Subfamily IIIA) phosphatase, TIGR01668 Length = 176 Score = 266 bits (681), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 128/163 (78%), Positives = 148/163 (90%), Gaps = 1/163 (0%) Query: 1 VNTVFDIALEELYALGYRGIITDLDNTLVGAKAPLATPELLLWFAKVKELGFKLIIVSNN 60 VNTVFDI LEELY GYRGIITDLDNTLVGAKAPLATPEL++WF +VKE+GF+LIIVSNN Sbjct: 11 VNTVFDINLEELYEQGYRGIITDLDNTLVGAKAPLATPELVVWFKRVKEIGFQLIIVSNN 70 Query: 61 NMDRVSRFATPLNIEFVHQARKPSNTPFLKAMKQMGLTPEQTIVVGDQMLTDVYGGNRLG 120 ++RVS+FATPL+I++VH+ARKPSNTPF KAM M LTPE+T+VVGDQMLTDVYGGNRLG Sbjct: 71 QLERVSKFATPLDIQYVHEARKPSNTPFRKAMNMMELTPEKTVVVGDQMLTDVYGGNRLG 130 Query: 121 LYTVLVLPISVKDEGIGTR-INRRVERIATTRLRKQGLWHEED 162 LYTVLV+PI++ DEG TR +NRRVERIA TRLRK+GLW EE+ Sbjct: 131 LYTVLVMPIAINDEGWFTRLVNRRVERIALTRLRKKGLWMEEE 173 >B1DBJ8.1 B1DBJ8_9BACL HAD superfamily (Subfamily IIIA) phosphatase, TIGR01668 Length = 174 Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 102/160 (63%), Positives = 127/160 (79%) Query: 1 VNTVFDIALEELYALGYRGIITDLDNTLVGAKAPLATPELLLWFAKVKELGFKLIIVSNN 60 VN+V+DI L+ELY G RGIITDLDNTLVGA+ PLATP+L W +V++ GFK++IVSNN Sbjct: 11 VNSVYDIQLDELYKKGVRGIITDLDNTLVGAREPLATPQLTTWLEQVRDYGFKVVIVSNN 70 Query: 61 NMDRVSRFATPLNIEFVHQARKPSNTPFLKAMKQMGLTPEQTIVVGDQMLTDVYGGNRLG 120 N RVS+FA PL I F+H ARKP+N F KA+ +GL EQT+V+GDQMLTDV GG R+G Sbjct: 71 NRTRVSKFADPLGIPFIHAARKPANKAFHKALSVLGLPVEQTVVLGDQMLTDVLGGKRMG 130 Query: 121 LYTVLVLPISVKDEGIGTRINRRVERIATTRLRKQGLWHE 160 LYT+LV PI+ DEGI TR+NRR+ER +RLRK+G W+E Sbjct: 131 LYTILVTPIAPADEGIMTRVNRRIERFVLSRLRKKGTWYE 170 >Q9KD95.1 Q9KD95_BACHD BH1322 protein Length = 171 Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 83/162 (51%), Positives = 112/162 (69%), Gaps = 1/162 (0%) Query: 1 VNTVFDIALEELYALGYRGIITDLDNTLVGAKAPLATPELLLWFAKVKELGFKLIIVSNN 60 V TV DI LEEL G +GIITDLDNTLV P ATPE+ WF +VK+ G KL IVSNN Sbjct: 11 VKTVHDIPLEELKQQGIKGIITDLDNTLVEWDRPEATPEVKEWFQQVKDAGMKLTIVSNN 70 Query: 61 NMDRVSRFATPLNIEFVHQARKPSNTPFLKAMKQMGLTPEQTIVVGDQMLTDVYGGNRLG 120 + RV FA P+ + F+H A+KP F++A KQM ++ + +VVGDQ+ TDV GGNR Sbjct: 71 SEKRVRSFAAPVQVNFIHSAKKPMTKAFVEACKQMNISVSEAVVVGDQIFTDVLGGNRAN 130 Query: 121 LYTVLVLPISVKDEGIGTRINRRVERIATTRLRKQGLWHEED 162 ++T+LV+P++ D G+ TR NRR+ER + +RK+G+ H E+ Sbjct: 131 IHTILVVPVTDTD-GVFTRFNRRMERYVLSWMRKKGMIHWEE 171 >B4BLW9.1 B4BLW9_9BACI HAD superfamily (Subfamily IIIA) phosphatase, TIGR01668 Length = 171 Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 86/159 (54%), Positives = 111/159 (69%), Gaps = 3/159 (1%) Query: 4 VFDIALEELYALGYRGIITDLDNTLVGAKAPLATPELLLWFAKVKELGFKLIIVSNNNMD 63 V DI +EL G +GIITDLDNTLV P ATPEL WF +K G K++IVSNNN Sbjct: 14 VIDITPDELKKKGVKGIITDLDNTLVEWDRPSATPELAAWFETMKRAGIKVVIVSNNNKR 73 Query: 64 RVSRFATPLNIEFVHQARKPSNTPFLKAMKQMGLTPEQTIVVGDQMLTDVYGGNRLGLYT 123 RV FA PL+I F+ +ARKP FL+A++ MGL E+ +V+GDQ+LTDV GGNRLGL T Sbjct: 74 RVQSFAEPLDIPFIFEARKPLTRAFLQALEMMGLKKEEVVVIGDQLLTDVLGGNRLGLNT 133 Query: 124 VLVLPISVKDEGIGTRINRRVERIATTRLRKQGL--WHE 160 +LV+P++ D GI TR+NR++ER +RK+G+ W E Sbjct: 134 ILVVPVAQTD-GIWTRLNRKIERKILNAMRKKGMIYWEE 171 >A4IR53.1 A4IR53_GEOTN Putative uncharacterized protein Length = 174 Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 86/159 (54%), Positives = 111/159 (69%), Gaps = 3/159 (1%) Query: 4 VFDIALEELYALGYRGIITDLDNTLVGAKAPLATPELLLWFAKVKELGFKLIIVSNNNMD 63 V DI +EL G +GIITDLDNTLV P ATPEL WF +K G K++IVSNNN Sbjct: 17 VIDITPDELKKKGVKGIITDLDNTLVEWDRPSATPELAAWFETMKRAGIKVVIVSNNNKR 76 Query: 64 RVSRFATPLNIEFVHQARKPSNTPFLKAMKQMGLTPEQTIVVGDQMLTDVYGGNRLGLYT 123 RV FA PL+I F+ +ARKP FL+A++ MGL E+ +V+GDQ+LTDV GGNRLGL T Sbjct: 77 RVQSFAEPLDIPFIFEARKPLTRAFLQALEMMGLKKEEVVVIGDQLLTDVLGGNRLGLNT 136 Query: 124 VLVLPISVKDEGIGTRINRRVERIATTRLRKQGL--WHE 160 +LV+P++ D GI TR+NR++ER +RK+G+ W E Sbjct: 137 ILVVPVAQTD-GIWTRLNRKIERKILNAMRKKGMIYWEE 174 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.139 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 978,884,332 Number of extensions: 39032543 Number of successful extensions: 104085 Number of sequences better than 1.0e-05: 435 Number of HSP's gapped: 103965 Number of HSP's successfully gapped: 437 Length of query: 165 Length of database: 3,060,696,203 Length adjustment: 125 Effective length of query: 40 Effective length of database: 1,883,069,328 Effective search space: 75322773120 Effective search space used: 75322773120 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 125 (52.8 bits)