BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0545.0007.p
         (97 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KFY1.1 B3KFY1_9BACI Putative uncharacterized protein                159   8e-38
Q5HFG6.1 Q5HFG6_STAAC Putative uncharacterized protein                132   8e-30
Q2FXY2.1 Q2FXY2_STAA8 Putative uncharacterized protein                132   8e-30
Q2FGC9.1 Q2FGC9_STAA3 Putative uncharacterized protein                132   8e-30
A8Z4D4.1 A8Z4D4_STAAT Putative uncharacterized protein                132   8e-30

>B3KFY1.1 B3KFY1_9BACI Putative uncharacterized protein
          Length = 96

 Score =  159 bits (402), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 76/96 (79%), Positives = 87/96 (90%)

Query: 1  MLTGKQKRYLRSLAHHLDAVFQVGKGGVNDHLIRHIEEAIEKRELMKISVLNNNTDDPKE 60
          MLTGKQKR+LRSLAHHLD +FQVGKGG N+HLIRHI EAIEKRELMK+SVLNN  +DP+E
Sbjct: 1  MLTGKQKRHLRSLAHHLDPLFQVGKGGSNEHLIRHISEAIEKRELMKVSVLNNCLEDPRE 60

Query: 61 IGAALAEQSGSELVQVIGKTIILYKESRDNKTIELP 96
          I   LAE +G+ELVQVIGKTI+LYKES+D+KTIELP
Sbjct: 61 IAQELAEGAGAELVQVIGKTIVLYKESKDHKTIELP 96


>Q5HFG6.1 Q5HFG6_STAAC Putative uncharacterized protein
          Length = 96

 Score =  132 bits (333), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 59/96 (61%), Positives = 80/96 (83%)

Query: 1  MLTGKQKRYLRSLAHHLDAVFQVGKGGVNDHLIRHIEEAIEKRELMKISVLNNNTDDPKE 60
          MLTGKQKRYLRSLAH++D +FQ+GKGG+N+++I+ I++ +E REL+K+ VL NN DD KE
Sbjct: 1  MLTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQNNFDDKKE 60

Query: 61 IGAALAEQSGSELVQVIGKTIILYKESRDNKTIELP 96
          +   L+E + SELVQVIG  I++Y+ES+DNK IELP
Sbjct: 61 LAETLSEATHSELVQVIGSMIVIYRESKDNKEIELP 96


>Q2FXY2.1 Q2FXY2_STAA8 Putative uncharacterized protein
          Length = 96

 Score =  132 bits (333), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 59/96 (61%), Positives = 80/96 (83%)

Query: 1  MLTGKQKRYLRSLAHHLDAVFQVGKGGVNDHLIRHIEEAIEKRELMKISVLNNNTDDPKE 60
          MLTGKQKRYLRSLAH++D +FQ+GKGG+N+++I+ I++ +E REL+K+ VL NN DD KE
Sbjct: 1  MLTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQNNFDDKKE 60

Query: 61 IGAALAEQSGSELVQVIGKTIILYKESRDNKTIELP 96
          +   L+E + SELVQVIG  I++Y+ES+DNK IELP
Sbjct: 61 LAETLSEATHSELVQVIGSMIVIYRESKDNKEIELP 96


>Q2FGC9.1 Q2FGC9_STAA3 Putative uncharacterized protein
          Length = 96

 Score =  132 bits (333), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 59/96 (61%), Positives = 80/96 (83%)

Query: 1  MLTGKQKRYLRSLAHHLDAVFQVGKGGVNDHLIRHIEEAIEKRELMKISVLNNNTDDPKE 60
          MLTGKQKRYLRSLAH++D +FQ+GKGG+N+++I+ I++ +E REL+K+ VL NN DD KE
Sbjct: 1  MLTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQNNFDDKKE 60

Query: 61 IGAALAEQSGSELVQVIGKTIILYKESRDNKTIELP 96
          +   L+E + SELVQVIG  I++Y+ES+DNK IELP
Sbjct: 61 LAETLSEATHSELVQVIGSMIVIYRESKDNKEIELP 96


>A8Z4D4.1 A8Z4D4_STAAT Putative uncharacterized protein
          Length = 96

 Score =  132 bits (333), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 59/96 (61%), Positives = 80/96 (83%)

Query: 1  MLTGKQKRYLRSLAHHLDAVFQVGKGGVNDHLIRHIEEAIEKRELMKISVLNNNTDDPKE 60
          MLTGKQKRYLRSLAH++D +FQ+GKGG+N+++I+ I++ +E REL+K+ VL NN DD KE
Sbjct: 1  MLTGKQKRYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQNNFDDKKE 60

Query: 61 IGAALAEQSGSELVQVIGKTIILYKESRDNKTIELP 96
          +   L+E + SELVQVIG  I++Y+ES+DNK IELP
Sbjct: 61 LAETLSEATHSELVQVIGSMIVIYRESKDNKEIELP 96


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.315    0.134    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 552,989,119
Number of extensions: 19823662
Number of successful extensions: 45674
Number of sequences better than 1.0e-05: 735
Number of HSP's gapped: 45669
Number of HSP's successfully gapped: 735
Length of query: 97
Length of database: 3,060,696,203
Length adjustment: 66
Effective length of query: 31
Effective length of database: 2,438,909,213
Effective search space: 75606185603
Effective search space used: 75606185603
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 125 (52.8 bits)