BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0544.0047.p
         (67 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B8KLI3.1 B8KLI3_9GAMM Hypothetical secreted protein                    99   1e-19
A7IDV1.1 A7IDV1_XANP2 Conserved hypothetical secreted protein          97   3e-19
B2IAZ4.1 B2IAZ4_BEII9 Conserved hypothetical secreted protein          97   3e-19
Q0BT00.1 Q0BT00_GRABC Hypothetical secreted protein                    97   6e-19
A6SZ67.1 A6SZ67_JANMA Uncharacterized conserved protein                94   4e-18

>B8KLI3.1 B8KLI3_9GAMM Hypothetical secreted protein
          Length = 110

 Score = 98.6 bits (244), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 55/66 (83%)

Query: 2   FLGDGGEFLIGPEDEKWDLVMLIRQSSAQSFLAFSNNQDYLAGIGHRTAAIEDSRLLPMA 61
           FLG+GG+F +GP+DE+W L+MLIRQ S QSF+AF+ N+ Y+AG+GHRTAA+EDSRLLP+ 
Sbjct: 42  FLGEGGKFFVGPQDERWYLLMLIRQDSLQSFIAFATNEAYIAGVGHRTAALEDSRLLPLE 101

Query: 62  ELPKPN 67
             P  N
Sbjct: 102 RYPSHN 107


>A7IDV1.1 A7IDV1_XANP2 Conserved hypothetical secreted protein
          Length = 172

 Score = 97.4 bits (241), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 56/64 (87%)

Query: 1   VFLGDGGEFLIGPEDEKWDLVMLIRQSSAQSFLAFSNNQDYLAGIGHRTAAIEDSRLLPM 60
           +FLG GG FLIGP++E+WD  ML+RQ+S  SFLAF+++  YLAG+GHRTAA+EDSRLLP+
Sbjct: 103 LFLGSGGPFLIGPDNERWDRAMLVRQTSVASFLAFASHDAYLAGLGHRTAALEDSRLLPL 162

Query: 61  AELP 64
           +E+P
Sbjct: 163 SEMP 166


>B2IAZ4.1 B2IAZ4_BEII9 Conserved hypothetical secreted protein
          Length = 153

 Score = 97.4 bits (241), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/66 (65%), Positives = 54/66 (81%)

Query: 1   VFLGDGGEFLIGPEDEKWDLVMLIRQSSAQSFLAFSNNQDYLAGIGHRTAAIEDSRLLPM 60
           +FLG GG FLIGP DE+WD+ ML+RQ+S  SFL+F+ N+ YL G+GHR AAIEDSRLLP+
Sbjct: 80  LFLGAGGGFLIGPADERWDMAMLVRQASVASFLSFAGNEGYLVGLGHRAAAIEDSRLLPL 139

Query: 61  AELPKP 66
           +EL  P
Sbjct: 140 SELRLP 145


>Q0BT00.1 Q0BT00_GRABC Hypothetical secreted protein
          Length = 151

 Score = 96.7 bits (239), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 55/66 (83%)

Query: 1   VFLGDGGEFLIGPEDEKWDLVMLIRQSSAQSFLAFSNNQDYLAGIGHRTAAIEDSRLLPM 60
           +FLG GG FLIGP DE WDL M+IRQ+S  SFL+F++++ YLAG+GHRTAA+ DSRLLP+
Sbjct: 80  LFLGHGGPFLIGPTDEHWDLAMMIRQASTASFLSFASHKGYLAGLGHRTAAVMDSRLLPL 139

Query: 61  AELPKP 66
           +E+  P
Sbjct: 140 SEMALP 145


>A6SZ67.1 A6SZ67_JANMA Uncharacterized conserved protein
          Length = 143

 Score = 94.0 bits (232), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 51/62 (82%)

Query: 1   VFLGDGGEFLIGPEDEKWDLVMLIRQSSAQSFLAFSNNQDYLAGIGHRTAAIEDSRLLPM 60
           +FLG GG  LIGPEDE WD V+L+RQSS  SFLAF+++ DY  G+GHRTAA+EDSRLL M
Sbjct: 77  LFLGSGGHMLIGPEDEVWDKVLLVRQSSVASFLAFASHADYCRGLGHRTAALEDSRLLAM 136

Query: 61  AE 62
           +E
Sbjct: 137 SE 138


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.318    0.138    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 417,340,715
Number of extensions: 12549359
Number of successful extensions: 22145
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 22145
Number of HSP's successfully gapped: 17
Length of query: 67
Length of database: 3,060,696,203
Length adjustment: 39
Effective length of query: 28
Effective length of database: 2,693,276,618
Effective search space: 75411745304
Effective search space used: 75411745304
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 125 (52.8 bits)