BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0544.0015.p (498 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K5L5.1 B3K5L5_9BACI ABC transporter related 826 0.0 C0ZD86.1 C0ZD86_BREBN Probable ABC transporter ATP binding protein 820 0.0 B1DK64.1 B1DK64_9BACL ABC transporter related 796 0.0 C1TDT3.1 C1TDT3_9FIRM ATPase component of ABC transporters with ... 778 0.0 A6LXZ6.1 A6LXZ6_CLOB8 ABC transporter related 756 0.0 >B3K5L5.1 B3K5L5_9BACI ABC transporter related Length = 498 Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/498 (80%), Positives = 442/498 (88%), Gaps = 6/498 (1%) Query: 1 MSLINVTGLTFAYEGTYDNIFENVNXXXXIDTDWKLGFTGRNGRGKTTFLQLLLGKHEYS 60 MSLINVT LTFAYE +YD IFENV+ IDTDWKLGFTGRNGRGKTTFL LL GK+EYS Sbjct: 1 MSLINVTNLTFAYESSYDPIFENVSFQ--IDTDWKLGFTGRNGRGKTTFLNLLQGKYEYS 58 Query: 61 GTISAKVNFXXXXXYFPYPVPNKEYHTLDVISDMFPDYVHWQFMRELSLLQVDEDVLYRP 120 G IS+ V+F YFPY V +KEY TLDVI +++P+YVHWQ +REL+LL+V EDVLYRP Sbjct: 59 GNISSAVSFD----YFPYHVEHKEYLTLDVIEEIYPEYVHWQILRELNLLKVSEDVLYRP 114 Query: 121 FASLSNGEQTKVLLAALFIKENSFLLIDEPTNHLDMHARTLVSEYLNTKSGYILVSHDRS 180 +ASLSNGEQTKV+LAALF KEN FLLIDEPTNHLDMHAR VS+YL+ KSGYILVSHDR+ Sbjct: 115 YASLSNGEQTKVMLAALFTKENRFLLIDEPTNHLDMHARKSVSDYLSKKSGYILVSHDRA 174 Query: 181 FLDHCVDHILSINKTNIEIQKGNFSSWWENKRRQDNFELAQNEKLRKDIKRLSDSSKRTG 240 FLD CVDHILSINKTNIEIQKGNFS+WWENK+RQD FELA +EKLRKDIKRL+DS+KRTG Sbjct: 175 FLDDCVDHILSINKTNIEIQKGNFSAWWENKKRQDQFELASDEKLRKDIKRLTDSAKRTG 234 Query: 241 NWSHEVEKSKNGTRNSGSKIDKGYVGHKAAKMMKRSKSIEQRQQSAITEKSKLLKNIESS 300 NWSHEVEK+KNGTRNSGSK+DKGY+GHKAAKMMKRSK++EQRQQSAI EKSKLLKNIESS Sbjct: 235 NWSHEVEKTKNGTRNSGSKVDKGYIGHKAAKMMKRSKNLEQRQQSAIEEKSKLLKNIESS 294 Query: 301 DTLEITQLAYHKNILAELEQVSIFYGEKQVCANVNFTIEQGERIALSGKNGSGKSSILKL 360 ++L I+QL YHK LAELE VSI YG K VC NV+FTIEQ ERIALSGKNGSGKSSILKL Sbjct: 295 ESLAISQLEYHKKQLAELENVSISYGSKTVCENVSFTIEQRERIALSGKNGSGKSSILKL 354 Query: 361 ICGEVIPYTGSFMKDSQLKISYVSQDTSHLQGSLADYIRDNGIDETLFKSILRKLDFSRN 420 ICGE + YTG +D QLKISYVSQDTSHL+GSL+DY +GIDE+LFKSILRKLDFSR Sbjct: 355 ICGEDLQYTGHLSRDRQLKISYVSQDTSHLRGSLSDYATSSGIDESLFKSILRKLDFSRL 414 Query: 421 QFEKDLSTYSGGQKKKVLIAKSLSEQVHLHIWDEPLNFIDVISRMQIEELLLEYTPTILF 480 QFEKD+STYSGGQKKKVLIAKSLSEQ HLHIWDEPLNFIDVISRMQIEELLLEY PTILF Sbjct: 415 QFEKDISTYSGGQKKKVLIAKSLSEQAHLHIWDEPLNFIDVISRMQIEELLLEYAPTILF 474 Query: 481 VEHDREFCSNVATKTIEL 498 VEHDR FC NVATK +EL Sbjct: 475 VEHDRAFCENVATKIVEL 492 >C0ZD86.1 C0ZD86_BREBN Probable ABC transporter ATP binding protein Length = 492 Score = 820 bits (2118), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/498 (79%), Positives = 451/498 (90%), Gaps = 6/498 (1%) Query: 1 MSLINVTGLTFAYEGTYDNIFENVNXXXXIDTDWKLGFTGRNGRGKTTFLQLLLGKHEYS 60 MSLI+V LTFAYEG++DNIFENV+ IDTDWKLGFTGRNGRGKTTFL LLLGK+EYS Sbjct: 1 MSLISVNNLTFAYEGSFDNIFENVSFQ--IDTDWKLGFTGRNGRGKTTFLNLLLGKYEYS 58 Query: 61 GTISAKVNFXXXXXYFPYPVPNKEYHTLDVISDMFPDYVHWQFMRELSLLQVDEDVLYRP 120 G ISA+V+F YFP+ V NKEY TLD++ D+ PDY W+ MRE SLL+V +DVLYRP Sbjct: 59 GKISAQVSFE----YFPFQVENKEYLTLDIVQDIVPDYQLWELMREFSLLKVSDDVLYRP 114 Query: 121 FASLSNGEQTKVLLAALFIKENSFLLIDEPTNHLDMHARTLVSEYLNTKSGYILVSHDRS 180 F SLSNGEQTKV+LAALF+KENSFLLIDEPTNHLDMHAR LVS+YL++KSGYILVSHDR+ Sbjct: 115 FESLSNGEQTKVMLAALFLKENSFLLIDEPTNHLDMHARELVSDYLHSKSGYILVSHDRA 174 Query: 181 FLDHCVDHILSINKTNIEIQKGNFSSWWENKRRQDNFELAQNEKLRKDIKRLSDSSKRTG 240 FLD+CVDHILSINKTNIE+QKG+FS WWENK+RQDN+ELA+NEKL+KDIKRLSD++KRT Sbjct: 175 FLDNCVDHILSINKTNIEVQKGSFSDWWENKQRQDNYELAENEKLKKDIKRLSDAAKRTS 234 Query: 241 NWSHEVEKSKNGTRNSGSKIDKGYVGHKAAKMMKRSKSIEQRQQSAITEKSKLLKNIESS 300 NWS VEK+KNGT NSGSK+DKGYVGHKAAKMMKRSKS+EQRQQSAI EKSKLLKNIE+ Sbjct: 235 NWSDAVEKTKNGTLNSGSKLDKGYVGHKAAKMMKRSKSMEQRQQSAIDEKSKLLKNIENQ 294 Query: 301 DTLEITQLAYHKNILAELEQVSIFYGEKQVCANVNFTIEQGERIALSGKNGSGKSSILKL 360 ++L+I QLAYHKN LAELE+VSI YGEK VCA+V+FTI+QGERIALSGKNGSGKSSILKL Sbjct: 295 ESLKIAQLAYHKNQLAELEKVSISYGEKLVCADVSFTIDQGERIALSGKNGSGKSSILKL 354 Query: 361 ICGEVIPYTGSFMKDSQLKISYVSQDTSHLQGSLADYIRDNGIDETLFKSILRKLDFSRN 420 ICGE I +TG+F K SQLKISYVSQDTSHL+G+L D+ RDN I+E+LFKSILRKLDFSR Sbjct: 355 ICGENIQHTGTFRKGSQLKISYVSQDTSHLKGNLTDFARDNEIEESLFKSILRKLDFSRV 414 Query: 421 QFEKDLSTYSGGQKKKVLIAKSLSEQVHLHIWDEPLNFIDVISRMQIEELLLEYTPTILF 480 QFEKD+S++SGGQKKKVLIAKSL E+ HLHIWDEPLNFIDVISRMQIEELLLE++PTILF Sbjct: 415 QFEKDISSFSGGQKKKVLIAKSLCEKAHLHIWDEPLNFIDVISRMQIEELLLEHSPTILF 474 Query: 481 VEHDREFCSNVATKTIEL 498 VEHDREFC+N+ATK +EL Sbjct: 475 VEHDREFCNNIATKIVEL 492 >B1DK64.1 B1DK64_9BACL ABC transporter related Length = 492 Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/498 (76%), Positives = 445/498 (89%), Gaps = 6/498 (1%) Query: 1 MSLINVTGLTFAYEGTYDNIFENVNXXXXIDTDWKLGFTGRNGRGKTTFLQLLLGKHEYS 60 MSLINV+ LTFA++G+YDNIFENV+ IDTDWKLGFTGRNGRGKTTF+ LLL K+EYS Sbjct: 1 MSLINVSNLTFAHDGSYDNIFENVSFQ--IDTDWKLGFTGRNGRGKTTFMNLLLDKYEYS 58 Query: 61 GTISAKVNFXXXXXYFPYPVPNKEYHTLDVISDMFPDYVHWQFMRELSLLQVDEDVLYRP 120 G ISA V F YFP+ V + EY T DV+ ++ PDY W+ MREL+LLQV +DVLYRP Sbjct: 59 GHISANVTFD----YFPFRVEHPEYLTTDVVEEICPDYQQWELMRELTLLQVSDDVLYRP 114 Query: 121 FASLSNGEQTKVLLAALFIKENSFLLIDEPTNHLDMHARTLVSEYLNTKSGYILVSHDRS 180 F +LSNGEQTKVLLAALF+KE+SFLLIDEPTNHLDM+AR LVS+YLN K+G+ILVSHDR+ Sbjct: 115 FNTLSNGEQTKVLLAALFLKEDSFLLIDEPTNHLDMNARKLVSQYLNGKNGFILVSHDRT 174 Query: 181 FLDHCVDHILSINKTNIEIQKGNFSSWWENKRRQDNFELAQNEKLRKDIKRLSDSSKRTG 240 FLDHCVDHILSIN+TNIEIQKGNFS WWENK RQ+ +ELA+N+KL+KDIKRLSD++KRT Sbjct: 175 FLDHCVDHILSINRTNIEIQKGNFSDWWENKERQNQYELAENDKLKKDIKRLSDAAKRTN 234 Query: 241 NWSHEVEKSKNGTRNSGSKIDKGYVGHKAAKMMKRSKSIEQRQQSAITEKSKLLKNIESS 300 NWSHEVEK+KNGTRNSGSK+DKGY+GHKAAKMMKRSKS+EQRQQSAI EKS LLKNIESS Sbjct: 235 NWSHEVEKTKNGTRNSGSKVDKGYIGHKAAKMMKRSKSMEQRQQSAIDEKSTLLKNIESS 294 Query: 301 DTLEITQLAYHKNILAELEQVSIFYGEKQVCANVNFTIEQGERIALSGKNGSGKSSILKL 360 D+L++ QL YHK L ELE+VS++YG+K+VC++++FTIEQGERIALSG+NGSGKSS+LKL Sbjct: 295 DSLKLEQLVYHKPQLVELERVSVYYGDKEVCSDISFTIEQGERIALSGRNGSGKSSLLKL 354 Query: 361 ICGEVIPYTGSFMKDSQLKISYVSQDTSHLQGSLADYIRDNGIDETLFKSILRKLDFSRN 420 I GE + YTG+F K S LKISYVSQDTSHL+G+L DY R++G+DE+LFK+ILRKLDFSR Sbjct: 355 IIGEDLTYTGTFRKGSSLKISYVSQDTSHLRGNLTDYAREHGVDESLFKAILRKLDFSRI 414 Query: 421 QFEKDLSTYSGGQKKKVLIAKSLSEQVHLHIWDEPLNFIDVISRMQIEELLLEYTPTILF 480 QFEKD+S++SGGQKKKVLIAKSLSE+ HLHIWDEPLNFIDVISRMQIEELLLE++PTILF Sbjct: 415 QFEKDMSSFSGGQKKKVLIAKSLSEKAHLHIWDEPLNFIDVISRMQIEELLLEHSPTILF 474 Query: 481 VEHDREFCSNVATKTIEL 498 VEHDR FC N+ATK +EL Sbjct: 475 VEHDRAFCENIATKIVEL 492 >C1TDT3.1 C1TDT3_9FIRM ATPase component of ABC transporters with duplicated ATPase domain Length = 495 Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/498 (75%), Positives = 435/498 (87%), Gaps = 6/498 (1%) Query: 1 MSLINVTGLTFAYEGTYDNIFENVNXXXXIDTDWKLGFTGRNGRGKTTFLQLLLGKHEYS 60 MSLINV LTFAY+G+Y+NI ENV+ IDTDWKLGFTGRNGRGKTTFL LLLGK+EYS Sbjct: 1 MSLINVANLTFAYDGSYENIIENVSFQ--IDTDWKLGFTGRNGRGKTTFLNLLLGKYEYS 58 Query: 61 GTISAKVNFXXXXXYFPYPVPNKEYHTLDVISDMFPDYVHWQFMRELSLLQVDEDVLYRP 120 G I+A V+F YFP+ V NKE +TLDVISD+FP+Y+HW+ MRE SLL+V E++LYRP Sbjct: 59 GNIAANVSFE----YFPFKVVNKENNTLDVISDIFPEYLHWKLMREFSLLEVSENILYRP 114 Query: 121 FASLSNGEQTKVLLAALFIKENSFLLIDEPTNHLDMHARTLVSEYLNTKSGYILVSHDRS 180 F SLS GEQ+KVLLA LF+KEN+FLLIDEPTNHLD+ AR LVS+YLNTK G+ILVSHDR+ Sbjct: 115 FDSLSYGEQSKVLLATLFLKENNFLLIDEPTNHLDITARKLVSDYLNTKKGFILVSHDRA 174 Query: 181 FLDHCVDHILSINKTNIEIQKGNFSSWWENKRRQDNFELAQNEKLRKDIKRLSDSSKRTG 240 FLD+C+DHILSINKTNIEIQKGNFS WWENK+RQDNFELA++EKL+K I+RLSDS+KRT Sbjct: 175 FLDNCIDHILSINKTNIEIQKGNFSCWWENKKRQDNFELAEHEKLKKGIQRLSDSAKRTS 234 Query: 241 NWSHEVEKSKNGTRNSGSKIDKGYVGHKAAKMMKRSKSIEQRQQSAITEKSKLLKNIESS 300 NWSHEVEK+K GT+NSGSK+DKGY+GHKAAKMMKRSKSIE RQQSAI EKSKLLKNIE S Sbjct: 235 NWSHEVEKTKKGTKNSGSKVDKGYIGHKAAKMMKRSKSIETRQQSAIEEKSKLLKNIEDS 294 Query: 301 DTLEITQLAYHKNILAELEQVSIFYGEKQVCANVNFTIEQGERIALSGKNGSGKSSILKL 360 D+L+I QL YHK LAELE VSIFY EK VC +V F IEQG+RIAL+GKNGSGKSSI+KL Sbjct: 295 DSLKIPQLVYHKMRLAELENVSIFYNEKMVCKDVGFIIEQGDRIALTGKNGSGKSSIIKL 354 Query: 361 ICGEVIPYTGSFMKDSQLKISYVSQDTSHLQGSLADYIRDNGIDETLFKSILRKLDFSRN 420 IC E I +TG+F K SQLKISYVSQ+TSHLQG+LA Y +NGI+E+L K+ILRKL FSR Sbjct: 355 ICNENISFTGTFRKGSQLKISYVSQNTSHLQGNLAGYAVNNGIEESLLKAILRKLGFSRV 414 Query: 421 QFEKDLSTYSGGQKKKVLIAKSLSEQVHLHIWDEPLNFIDVISRMQIEELLLEYTPTILF 480 QFEKD+ST+S GQKKKVLIAKSL EQ HL+IWDEPLN+IDVISR+QIE+LLLE+ PTILF Sbjct: 415 QFEKDMSTFSDGQKKKVLIAKSLCEQAHLYIWDEPLNYIDVISRIQIEDLLLEHQPTILF 474 Query: 481 VEHDREFCSNVATKTIEL 498 VEHDR FC N+ATK + + Sbjct: 475 VEHDRTFCGNIATKFVNM 492 >A6LXZ6.1 A6LXZ6_CLOB8 ABC transporter related Length = 492 Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/498 (72%), Positives = 427/498 (85%), Gaps = 6/498 (1%) Query: 1 MSLINVTGLTFAYEGTYDNIFENVNXXXXIDTDWKLGFTGRNGRGKTTFLQLLLGKHEYS 60 MSLINVT LTF+Y+G YD IFENV+ IDTDWKLGFTGRNGRGKTTFL LLLGK+EY+ Sbjct: 1 MSLINVTNLTFSYDGNYDTIFENVSFQ--IDTDWKLGFTGRNGRGKTTFLNLLLGKYEYT 58 Query: 61 GTISAKVNFXXXXXYFPYPVPNKEYHTLDVISDMFPDYVHWQFMRELSLLQVDEDVLYRP 120 G IS VNF YFPY V +E T+DVI ++ P+ + W+ ++ELS+L +D+D+LYR Sbjct: 59 GNISNNVNFE----YFPYEVEEQENFTIDVIKEISPNSMDWEIVKELSMLDIDDDILYRQ 114 Query: 121 FASLSNGEQTKVLLAALFIKENSFLLIDEPTNHLDMHARTLVSEYLNTKSGYILVSHDRS 180 F +LS GEQTK LLAA+F+KENSFLLIDEPTNHLD AR +S YL K G+IL+SHDR+ Sbjct: 115 FYTLSKGEQTKALLAAMFLKENSFLLIDEPTNHLDAEARKKLSNYLRKKKGFILISHDRA 174 Query: 181 FLDHCVDHILSINKTNIEIQKGNFSSWWENKRRQDNFELAQNEKLRKDIKRLSDSSKRTG 240 FLD+C+DH+LSINKTNIEIQKG+FSSWWENK+RQD +ELA+NEKLR+DI RLS+S+KRT Sbjct: 175 FLDNCIDHVLSINKTNIEIQKGDFSSWWENKKRQDGYELAENEKLRRDINRLSESAKRTS 234 Query: 241 NWSHEVEKSKNGTRNSGSKIDKGYVGHKAAKMMKRSKSIEQRQQSAITEKSKLLKNIESS 300 +WS EVEKSK GT NSGSK+DKGYVGHKAAKMMKRSKSIE R++++I EKSKLLKNIESS Sbjct: 235 SWSSEVEKSKKGTTNSGSKLDKGYVGHKAAKMMKRSKSIENRREASIEEKSKLLKNIESS 294 Query: 301 DTLEITQLAYHKNILAELEQVSIFYGEKQVCANVNFTIEQGERIALSGKNGSGKSSILKL 360 D+L+I+QLAYHKN L ELE VSIFYG+ VC ++N +IEQGERI+L GKNGSGKSSI+KL Sbjct: 295 DSLKISQLAYHKNKLLELENVSIFYGDTMVCKDINLSIEQGERISLKGKNGSGKSSIIKL 354 Query: 361 ICGEVIPYTGSFMKDSQLKISYVSQDTSHLQGSLADYIRDNGIDETLFKSILRKLDFSRN 420 IC E I YTG+F K S LKISYVSQDTS+L+G+L DY +N IDE+LFK+ILRKLDFSR Sbjct: 355 ICDENIKYTGTFRKGSGLKISYVSQDTSYLKGNLTDYALENSIDESLFKAILRKLDFSRE 414 Query: 421 QFEKDLSTYSGGQKKKVLIAKSLSEQVHLHIWDEPLNFIDVISRMQIEELLLEYTPTILF 480 QFEKD+S++SGGQKKKVLIAKSL E+ HL+IWDEPLNFIDVISRMQIEELLLEY+PT+LF Sbjct: 415 QFEKDISSFSGGQKKKVLIAKSLCEKAHLYIWDEPLNFIDVISRMQIEELLLEYSPTLLF 474 Query: 481 VEHDREFCSNVATKTIEL 498 VEHD EFC NVATK +EL Sbjct: 475 VEHDSEFCKNVATKIVEL 492 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.133 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,809,798,240 Number of extensions: 115510189 Number of successful extensions: 816989 Number of sequences better than 1.0e-05: 19737 Number of HSP's gapped: 801363 Number of HSP's successfully gapped: 28536 Length of query: 498 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 358 Effective length of database: 1,741,754,103 Effective search space: 623547968874 Effective search space used: 623547968874 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 133 (55.8 bits)