BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0542.0019.p (331 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B9E1N5.1 B9E1N5_CLOK1 Putative uncharacterized protein 255 5e-66 A5N875.1 A5N875_CLOK5 Predicted transporter protein 255 5e-66 C1PBJ6.1 C1PBJ6_BACCO Major facilitator superfamily MFS_1 254 1e-65 B3K8B2.1 B3K8B2_9BACI Major facilitator superfamily MFS_1 252 3e-65 C4L090.1 C4L090_EXISA Major facilitator superfamily MFS_1 247 1e-63 >B9E1N5.1 B9E1N5_CLOK1 Putative uncharacterized protein Length = 387 Score = 255 bits (651), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 128/293 (43%), Positives = 179/293 (61%) Query: 27 VYDLNMLLVVRFVHGVIFGVATTAIPTVIMGMIPRERRGEGVGYFTLSGTMASAIGPFLG 86 V ++ LL+ RF++G G+A+TA T++ +IP ERRGEG GY+TLS T+A++IGPFLG Sbjct: 95 VNNMYFLLINRFLNGAAMGIASTATGTIVAKVIPNERRGEGTGYYTLSLTIAASIGPFLG 154 Query: 87 LVIREQANFTTMFVVCAVFYVISIIVTAFADIPEVVMTKEQLEVVKGFRLQDFFEKTAMP 146 + I A+F F+VC + V S I F +P + KEQLE KGF L +FFE A+P Sbjct: 155 MFITGHASFYMNFIVCIILLVFSFIAVFFVKVPRLEFKKEQLEQRKGFSLHNFFEIKAIP 214 Query: 147 VSIVMLFVGMAYASILAFINSYALSLSLMDAAAFFFVIYSAFIIISRLFTGRLLDNRGDN 206 +SIV + + Y+SIL FI SY ++L+D + FFV+Y+ F+++SR FTGR D +G+N Sbjct: 215 ISIVATIIALGYSSILIFITSYTKEVNLVDVGSLFFVVYAIFVLVSRPFTGRWFDKKGEN 274 Query: 207 IVMYPAXXXXXXXXXXISKAGDSFTXXXXXXXXXXXXXTIMSCAQVIAANNSPQHRMGIA 266 VMYPA +S+ F+ T S Q IA SP+HR+G+A Sbjct: 275 FVMYPAILLFATALFILSQTHKGFSLLSAGALFGLGYGTTSSSVQAIAVKVSPKHRIGLA 334 Query: 267 TSTFFFCADLGVGAGSFFAGEIVSMTGFRDMYMVMAIIVALSILLYYILHGRK 319 TST F DLG+G G F G V + +R +YM+MA+I + I LYY LHG+K Sbjct: 335 TSTNFIFQDLGIGIGPFILGYFVPLIDYRGLYMMMAVIEFICIFLYYFLHGKK 387 >A5N875.1 A5N875_CLOK5 Predicted transporter protein Length = 387 Score = 255 bits (651), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 128/293 (43%), Positives = 179/293 (61%) Query: 27 VYDLNMLLVVRFVHGVIFGVATTAIPTVIMGMIPRERRGEGVGYFTLSGTMASAIGPFLG 86 V ++ LL+ RF++G G+A+TA T++ +IP ERRGEG GY+TLS T+A++IGPFLG Sbjct: 95 VNNMYFLLINRFLNGAAMGIASTATGTIVAKVIPNERRGEGTGYYTLSLTIAASIGPFLG 154 Query: 87 LVIREQANFTTMFVVCAVFYVISIIVTAFADIPEVVMTKEQLEVVKGFRLQDFFEKTAMP 146 + I A+F F+VC + V S I F +P + KEQLE KGF L +FFE A+P Sbjct: 155 MFITGHASFYMNFIVCIILLVFSFIAVFFVKVPRLEFKKEQLEQRKGFSLHNFFEIKAIP 214 Query: 147 VSIVMLFVGMAYASILAFINSYALSLSLMDAAAFFFVIYSAFIIISRLFTGRLLDNRGDN 206 +SIV + + Y+SIL FI SY ++L+D + FFV+Y+ F+++SR FTGR D +G+N Sbjct: 215 ISIVATIIALGYSSILIFITSYTKEVNLVDVGSLFFVVYAIFVLVSRPFTGRWFDKKGEN 274 Query: 207 IVMYPAXXXXXXXXXXISKAGDSFTXXXXXXXXXXXXXTIMSCAQVIAANNSPQHRMGIA 266 VMYPA +S+ F+ T S Q IA SP+HR+G+A Sbjct: 275 FVMYPAILLFATALFILSQTHKGFSLLSAGALFGLGYGTTSSSVQAIAVKVSPKHRIGLA 334 Query: 267 TSTFFFCADLGVGAGSFFAGEIVSMTGFRDMYMVMAIIVALSILLYYILHGRK 319 TST F DLG+G G F G V + +R +YM+MA+I + I LYY LHG+K Sbjct: 335 TSTNFIFQDLGIGIGPFILGYFVPLIDYRGLYMMMAVIEFICIFLYYFLHGKK 387 >C1PBJ6.1 C1PBJ6_BACCO Major facilitator superfamily MFS_1 Length = 399 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 121/322 (37%), Positives = 191/322 (59%) Query: 1 MEVIGRRKXXXXXXXXXXXXXXXXXXVYDLNMLLVVRFVHGVIFGVATTAIPTVIMGMIP 60 ++ IGR+K L +LL VRF++G G+A+TA T++ G+IP Sbjct: 69 IDRIGRKKMLYAGFIAILIISLFYFVTNQLGVLLAVRFLNGAALGIASTATGTIVAGIIP 128 Query: 61 RERRGEGVGYFTLSGTMASAIGPFLGLVIREQANFTTMFVVCAVFYVISIIVTAFADIPE 120 ERRGEG GY+ LS T+A+A+GPF+G+ + + A+F +F +C V +S I F +P+ Sbjct: 129 NERRGEGTGYYALSVTLAAAVGPFVGMFLIQHASFNMVFALCLVLLALSFISALFLKVPK 188 Query: 121 VVMTKEQLEVVKGFRLQDFFEKTAMPVSIVMLFVGMAYASILAFINSYALSLSLMDAAAF 180 V ++K LE +KG ++ +FFE P++I+ FVG+ Y+SIL+F+ SYA ++L+D ++F Sbjct: 189 VELSKADLEKMKGLKISNFFESKVFPIAIISAFVGLGYSSILSFLTSYAKEMNLVDISSF 248 Query: 181 FFVIYSAFIIISRLFTGRLLDNRGDNIVMYPAXXXXXXXXXXISKAGDSFTXXXXXXXXX 240 FF++Y+ +++SR FTGR D +G+N VMYP+ +++A Sbjct: 249 FFIVYAVTVLVSRPFTGRWFDTKGENFVMYPSFLLFAAGLVLLNQADSGLLILLAGIFVG 308 Query: 241 XXXXTIMSCAQVIAANNSPQHRMGIATSTFFFCADLGVGAGSFFAGEIVSMTGFRDMYMV 300 T + Q IA SP++R+G+ATSTFF D GVG G F G +V G+ +Y + Sbjct: 309 LGYGTFSASGQAIAVKVSPKNRIGLATSTFFIFLDAGVGVGPFLLGLLVPFAGYHGLYAI 368 Query: 301 MAIIVALSILLYYILHGRKTAS 322 MA+++ + LYY +HG+K AS Sbjct: 369 MAVVLVFCVFLYYFVHGKKAAS 390 >B3K8B2.1 B3K8B2_9BACI Major facilitator superfamily MFS_1 Length = 392 Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 130/328 (39%), Positives = 194/328 (59%), Gaps = 2/328 (0%) Query: 1 MEVIGRRKXXXXXXXXXXXXXXXXXXVYDLNMLLVVRFVHGVIFGVATTAIPTVIMGMIP 60 +E +GR+K V L+MLLVVRF HG+ F +A+TA T+ +IP Sbjct: 58 IERVGRKKLLFTGLIAFSVLIGLYFVVNSLSMLLVVRFFHGIAFALASTATGTIAASLIP 117 Query: 61 RERRGEGVGYFTLSGTMASAIGPFLGLVIREQANFTTMFVVCAVFYVISIIVTAFADIPE 120 RRGEG GY+ +S +ASAIGPF+GL+I E A+ F +CA V+S++ F +IP+ Sbjct: 118 NSRRGEGTGYYGVSIIIASAIGPFIGLMINEHASMMANFTLCAALGVLSLLSAFFMNIPK 177 Query: 121 VVMTKEQLEVVKGFRLQDFFEKTAMPVSIVMLFVGMAYASILAFINSYALSLSLMDAAAF 180 + +T EQ + ++G +L +F E A+P+S+V +G Y+SIL ++ +A +SL A++ Sbjct: 178 LKLTAEQKKDLQGLKLSNFIEPKAVPISLVSFVMGFGYSSILTYLMIFAGQISLAQVASY 237 Query: 181 FFVIYSAFIIISRLFTGRLLDNRGDNIVMYPAXXXXXXXXXXISKAGDSFTXXXXXXXXX 240 FF++Y+ +I+SR FTGR D RG N+VMYPA +S+A T Sbjct: 238 FFIVYAIVVILSRPFTGRWFDQRGANVVMYPAILSFAIGMVLLSQAHHGLTLLLSAVFVG 297 Query: 241 XXXXTIMSCAQVIAANNSPQHRMGIATSTFFFCADLGVGAGSFFAGEIVSMTGFRDMYMV 300 T S AQ +A SP HR+G+ATSTF+ D+G+G G F G + + GFR MY+ Sbjct: 298 LGYGTTQSSAQALAIKRSPAHRIGLATSTFYIFVDVGIGFGPFILGFLTPLVGFRGMYIA 357 Query: 301 MAIIVALSILLYYILHGRKT--ASDKHS 326 MA+++A I+LY+IL G+K +D H+ Sbjct: 358 MAVLLAAGIVLYHILVGKKENDGNDGHA 385 >C4L090.1 C4L090_EXISA Major facilitator superfamily MFS_1 Length = 395 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 122/327 (37%), Positives = 198/327 (60%), Gaps = 4/327 (1%) Query: 1 MEVIGRRKXXXXXXXXXXXXXXXXXXVYDLNMLLVVRFVHGVIFGVATTAIPTVIMGMIP 60 ++ IGR+K + + LL+ RFVHG+ G+++TA T++ +IP Sbjct: 72 IDSIGRKKTLYIGLVFFTATILLYFVHWGVGFLLLTRFVHGLGMGLSSTATGTIVAQVIP 131 Query: 61 RERRGEGVGYFTLSGTMASAIGPFLGLVIREQANFTTMFVVCAVFYVISIIVTAFADIPE 120 R+GEG+GY+++S T+A+AIGPF+GL++ + +FT +F +C V VIS+ T F ++PE Sbjct: 132 ATRKGEGIGYYSMSSTLATAIGPFVGLLLSQHTSFTVIFGLCFVIGVISLASTFFVNVPE 191 Query: 121 VVMTKEQLEVVKGFRLQDFFEKTAMPVSIVMLFVGMAYASILAFINSYALSLSLMDAAAF 180 V + EVV+GF L+ F E A+P+++++ ++Y+S+L++IN YA L L++AA+ Sbjct: 192 V----DAPEVVRGFSLKSFVEPKALPIALIIGMAALSYSSVLSYINFYASELDLIEAASI 247 Query: 181 FFVIYSAFIIISRLFTGRLLDNRGDNIVMYPAXXXXXXXXXXISKAGDSFTXXXXXXXXX 240 FF++YS +++SR TG+L+D RG N+VMYPA +S+A + Sbjct: 248 FFLVYSVAVLLSRPITGKLMDARGANVVMYPAIAIFAIGLLVLSQANSGWMLLLAGALIG 307 Query: 241 XXXXTIMSCAQVIAANNSPQHRMGIATSTFFFCADLGVGAGSFFAGEIVSMTGFRDMYMV 300 I S Q IA SP HRMG+ATSTFF D G+G G +F G ++ +TGF +Y++ Sbjct: 308 LGFGNIQSGTQAIAVKASPPHRMGMATSTFFIALDAGLGFGPYFIGLLIPLTGFSTLYLI 367 Query: 301 MAIIVALSILLYYILHGRKTASDKHSA 327 ++ +V +I LYY+++GR + A Sbjct: 368 LSGVVLFTIFLYYVMNGRNEQKQLNEA 394 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.331 0.142 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,464,945,056 Number of extensions: 50414606 Number of successful extensions: 238612 Number of sequences better than 1.0e-05: 591 Number of HSP's gapped: 237550 Number of HSP's successfully gapped: 591 Length of query: 331 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 195 Effective length of database: 1,779,438,163 Effective search space: 346990441785 Effective search space used: 346990441785 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 131 (55.1 bits)