BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0542.0018.p (206 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B9Y6V2.1 B9Y6V2_9FIRM Putative uncharacterized protein 241 3e-62 C3BFU0.1 C3BFU0_9BACI Putative uncharacterized protein 228 2e-58 C3AZA6.1 C3AZA6_BACMY Putative uncharacterized protein 228 2e-58 C3AHE8.1 C3AHE8_BACMY Putative uncharacterized protein 228 2e-58 B7HBN1.1 B7HBN1_BACC4 Putative uncharacterized protein 228 4e-58 >B9Y6V2.1 B9Y6V2_9FIRM Putative uncharacterized protein Length = 189 Score = 241 bits (615), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 109/181 (60%), Positives = 143/181 (79%) Query: 13 MKVVIGAGQTKYDGWLSTQEDELNLLALDSWIKLSAPESIDALLAEHVWEHLTYEEGVTA 72 MK+V+GAG T++DGW+STQ+D+L+LL +++ E +A+LAEH++EHLT E + A Sbjct: 1 MKIVLGAGTTQFDGWISTQQDQLDLLKPETFEAFFQDEQAEAMLAEHLFEHLTLAEAMIA 60 Query: 73 AKHCYQFLKPGGYIRCAVPDKNFRNDWYQQMVQVGGPGPADHPAASHKIVYDAKTFVSVF 132 A+ Q+LKPGG+IR AVPD+NFRN+ YQ++VQVGGPGP DHPAA+HKIVYD K F +VF Sbjct: 61 AQTLKQYLKPGGWIRAAVPDRNFRNEEYQKLVQVGGPGPQDHPAATHKIVYDYKQFCAVF 120 Query: 133 EMVGFEVTLLEYCDDNGDFYYTYWNETDGKIGRSFRFDTRNSINELGMVSIIIDAKKPLL 192 GFEV+LLEYCD+ GDF+Y Y N+ DG IGRS+R D+RN LGMVSII+DA KP++ Sbjct: 121 VQAGFEVSLLEYCDERGDFHYRYANDADGHIGRSYRHDSRNDHYRLGMVSIILDAYKPII 180 Query: 193 I 193 I Sbjct: 181 I 181 >C3BFU0.1 C3BFU0_9BACI Putative uncharacterized protein Length = 187 Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 109/178 (61%), Positives = 137/178 (76%), Gaps = 1/178 (0%) Query: 13 MKVVIGAGQTKYD-GWLSTQEDELNLLALDSWIKLSAPESIDALLAEHVWEHLTYEEGVT 71 +K+V+GAG+ + GWL T EDELNLL + WIK S++ +LAEHVWEHL+YEEGV Sbjct: 8 LKIVVGAGEINNNPGWLHTNEDELNLLKREDWIKRFDSNSLEVILAEHVWEHLSYEEGVE 67 Query: 72 AAKHCYQFLKPGGYIRCAVPDKNFRNDWYQQMVQVGGPGPADHPAASHKIVYDAKTFVSV 131 AAK CY+FLK GGYIRCAVPD F ++ YQ+ VQVGGPGP DHPAASHKIV++ KT +S+ Sbjct: 68 AAKVCYEFLKNGGYIRCAVPDSFFPDEEYQEGVQVGGPGPLDHPAASHKIVHNYKTIISM 127 Query: 132 FEMVGFEVTLLEYCDDNGDFYYTYWNETDGKIGRSFRFDTRNSINELGMVSIIIDAKK 189 FE GF+V LLEYCD++G+F+Y W+E +G I RS RFD RN +LG VS+I+DA K Sbjct: 128 FESAGFQVKLLEYCDESGEFHYNDWDEKEGFIYRSKRFDHRNQDGKLGFVSLIVDAVK 185 >C3AZA6.1 C3AZA6_BACMY Putative uncharacterized protein Length = 187 Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 109/178 (61%), Positives = 137/178 (76%), Gaps = 1/178 (0%) Query: 13 MKVVIGAGQTKYD-GWLSTQEDELNLLALDSWIKLSAPESIDALLAEHVWEHLTYEEGVT 71 +K+V+GAG+ + GWL T EDELNLL + WIK S++ +LAEHVWEHL+YEEGV Sbjct: 8 LKIVVGAGEINNNPGWLHTNEDELNLLKREDWIKRFDSNSLEVILAEHVWEHLSYEEGVE 67 Query: 72 AAKHCYQFLKPGGYIRCAVPDKNFRNDWYQQMVQVGGPGPADHPAASHKIVYDAKTFVSV 131 AAK CY+FLK GGYIRCAVPD F ++ YQ+ VQVGGPGP DHPAASHKIV++ KT +S+ Sbjct: 68 AAKVCYEFLKNGGYIRCAVPDSFFPDEEYQEGVQVGGPGPLDHPAASHKIVHNYKTIISM 127 Query: 132 FEMVGFEVTLLEYCDDNGDFYYTYWNETDGKIGRSFRFDTRNSINELGMVSIIIDAKK 189 FE GF+V LLEYCD++G+F+Y W+E +G I RS RFD RN +LG VS+I+DA K Sbjct: 128 FESAGFQVKLLEYCDESGEFHYNDWDEKEGFIYRSKRFDHRNQDGKLGFVSLIVDAVK 185 >C3AHE8.1 C3AHE8_BACMY Putative uncharacterized protein Length = 186 Score = 228 bits (581), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 109/178 (61%), Positives = 137/178 (76%), Gaps = 1/178 (0%) Query: 13 MKVVIGAGQTKYD-GWLSTQEDELNLLALDSWIKLSAPESIDALLAEHVWEHLTYEEGVT 71 +K+V+GAG+ + GWL T EDELNLL + WIK S++ +LAEHVWEHL+YEEGV Sbjct: 7 LKIVVGAGEINNNPGWLHTNEDELNLLKREDWIKRFDSNSLEVILAEHVWEHLSYEEGVE 66 Query: 72 AAKHCYQFLKPGGYIRCAVPDKNFRNDWYQQMVQVGGPGPADHPAASHKIVYDAKTFVSV 131 AAK CY+FLK GGYIRCAVPD F ++ YQ+ VQVGGPGP DHPAASHKIV++ KT +S+ Sbjct: 67 AAKVCYEFLKNGGYIRCAVPDSFFPDEEYQEGVQVGGPGPLDHPAASHKIVHNYKTIISM 126 Query: 132 FEMVGFEVTLLEYCDDNGDFYYTYWNETDGKIGRSFRFDTRNSINELGMVSIIIDAKK 189 FE GF+V LLEYCD++G+F+Y W+E +G I RS RFD RN +LG VS+I+DA K Sbjct: 127 FESAGFQVKLLEYCDESGEFHYNDWDEKEGFIYRSKRFDHRNQDGKLGFVSLIVDAVK 184 >B7HBN1.1 B7HBN1_BACC4 Putative uncharacterized protein Length = 185 Score = 228 bits (580), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 110/177 (62%), Positives = 131/177 (74%), Gaps = 1/177 (0%) Query: 14 KVVIGA-GQTKYDGWLSTQEDELNLLALDSWIKLSAPESIDALLAEHVWEHLTYEEGVTA 72 KVV+GA G GWL T E+ELNLL ++W+ P S+ +LAEHVWEHL+YEEG+ A Sbjct: 5 KVVVGAEGYNNNPGWLHTNEEELNLLRRETWLDKFQPNSLSVILAEHVWEHLSYEEGIEA 64 Query: 73 AKHCYQFLKPGGYIRCAVPDKNFRNDWYQQMVQVGGPGPADHPAASHKIVYDAKTFVSVF 132 AK CY+FL GYIRCAVPD F ++ YQQ VQVGGPGP DHPAASHKIV++ KT S+F Sbjct: 65 AKICYEFLMENGYIRCAVPDAFFPDEEYQQGVQVGGPGPLDHPAASHKIVHNYKTITSMF 124 Query: 133 EMVGFEVTLLEYCDDNGDFYYTYWNETDGKIGRSFRFDTRNSINELGMVSIIIDAKK 189 E GF+V LLEYCD+NG F+Y WNE DG I RS RFD RN N+LG VS+I+DA K Sbjct: 125 ESAGFQVRLLEYCDENGKFHYNDWNEKDGFIYRSKRFDHRNRDNQLGFVSLIVDAVK 181 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,399,785,214 Number of extensions: 60434401 Number of successful extensions: 120532 Number of sequences better than 1.0e-05: 120 Number of HSP's gapped: 120527 Number of HSP's successfully gapped: 120 Length of query: 206 Length of database: 3,060,696,203 Length adjustment: 129 Effective length of query: 77 Effective length of database: 1,845,385,268 Effective search space: 142094665636 Effective search space used: 142094665636 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 128 (53.9 bits)