BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0542.0009.p (160 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value P48790.1 XYLA_CLOSR Xylosidase/arabinosidase Beta-xylosidase Alp... 217 2e-55 B8I9B3.1 B8I9B3_CLOCE Glycoside hydrolase family 43 211 2e-53 A9KI84.1 A9KI84_CLOPH Alpha-N-arabinofuranosidase EC=3.2.1.55 190 5e-47 A6NTH5.1 A6NTH5_9BACE Putative uncharacterized protein 167 3e-40 A5ZTV3.1 A5ZTV3_9FIRM Putative uncharacterized protein 151 2e-35 >P48790.1 XYLA_CLOSR Xylosidase/arabinosidase Beta-xylosidase Alpha-N-arabinofuranosidase EC=3.2.1.37 EC=3.2.1.55 Length = 473 Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 102/137 (74%), Positives = 110/137 (80%) Query: 14 KKQGFNPYLPSWEYIPDGEPYVFEGRVYVYGSHDRFNGHAFCLNDYVCWSAPEDNLADWR 73 +KQ FNPYLPSWEYIPD EPYVF GRVY+YGSHDRFNGHAFCLNDYVCWSAP D+L++WR Sbjct: 2 RKQRFNPYLPSWEYIPDAEPYVFNGRVYIYGSHDRFNGHAFCLNDYVCWSAPVDDLSEWR 61 Query: 74 YEGVIYRTTDDPLNPEGSMCLYAPDVTVGPDGRXXXXXXXXXXXXXXXXXXXXPGGKYKF 133 YEGVIYR TDDPLNP+G MCLYAPDVT+GPDGR P GKY+F Sbjct: 62 YEGVIYRKTDDPLNPDGRMCLYAPDVTLGPDGRYYLYYVLDKVPVVSVAVCDTPAGKYEF 121 Query: 134 YGYVRYADGTRLGEREG 150 YGYVRYADGTRLGEREG Sbjct: 122 YGYVRYADGTRLGEREG 138 >B8I9B3.1 B8I9B3_CLOCE Glycoside hydrolase family 43 Length = 471 Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 99/135 (73%), Positives = 107/135 (79%) Query: 14 KKQGFNPYLPSWEYIPDGEPYVFEGRVYVYGSHDRFNGHAFCLNDYVCWSAPEDNLADWR 73 KKQGFNPYLPSWEYIPDGEPYVF RVYVYGSHDRFNG+ +CLNDYVCWSAP D+L +WR Sbjct: 2 KKQGFNPYLPSWEYIPDGEPYVFNNRVYVYGSHDRFNGYVYCLNDYVCWSAPVDDLGNWR 61 Query: 74 YEGVIYRTTDDPLNPEGSMCLYAPDVTVGPDGRXXXXXXXXXXXXXXXXXXXXPGGKYKF 133 YEGVIY+ TDDPLNP+GSMCLYAPDVTVGPDGR P GKY+F Sbjct: 62 YEGVIYKKTDDPLNPDGSMCLYAPDVTVGPDGRYYLYYVLDKLPIVSVAVCDTPAGKYEF 121 Query: 134 YGYVRYADGTRLGER 148 YGYV Y+DGTRLGER Sbjct: 122 YGYVHYSDGTRLGER 136 >A9KI84.1 A9KI84_CLOPH Alpha-N-arabinofuranosidase EC=3.2.1.55 Length = 471 Score = 190 bits (482), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 89/137 (64%), Positives = 99/137 (72%) Query: 14 KKQGFNPYLPSWEYIPDGEPYVFEGRVYVYGSHDRFNGHAFCLNDYVCWSAPEDNLADWR 73 +KQGFNPYLPSWEYIPDGEPY+F RVYVYGSHDRFNG+A+CLNDYVCWS P D+L+DWR Sbjct: 2 RKQGFNPYLPSWEYIPDGEPYIFNDRVYVYGSHDRFNGYAYCLNDYVCWSTPVDDLSDWR 61 Query: 74 YEGVIYRTTDDPLNPEGSMCLYAPDVTVGPDGRXXXXXXXXXXXXXXXXXXXXPGGKYKF 133 EGVIY+ TD N + CLYAPDV VGPDGR P GKY+F Sbjct: 62 CEGVIYKATDVQDNEDRDSCLYAPDVAVGPDGRYYLYYVDSKRSIISVAVCNTPAGKYEF 121 Query: 134 YGYVRYADGTRLGEREG 150 YGY+ YADG LGEREG Sbjct: 122 YGYIHYADGVNLGEREG 138 >A6NTH5.1 A6NTH5_9BACE Putative uncharacterized protein Length = 485 Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 80/136 (58%), Positives = 91/136 (66%) Query: 15 KQGFNPYLPSWEYIPDGEPYVFEGRVYVYGSHDRFNGHAFCLNDYVCWSAPEDNLADWRY 74 +Q FNPYLP WEYIPDGEP+VF RVYVYGSHDRF G FC+NDYVCWSAP DNL DWR Sbjct: 2 EQAFNPYLPGWEYIPDGEPHVFGDRVYVYGSHDRFGGPLFCMNDYVCWSAPVDNLRDWRC 61 Query: 75 EGVIYRTTDDPLNPEGSMCLYAPDVTVGPDGRXXXXXXXXXXXXXXXXXXXXPGGKYKFY 134 EGVIYR DP+N G CLYAPDVT GPDGR P G+Y+F+ Sbjct: 62 EGVIYRKYQDPMNRSGRRCLYAPDVTRGPDGRYYLYYAFDFLGVMAVAVCDTPAGQYQFH 121 Query: 135 GYVRYADGTRLGEREG 150 G+V++ DG G + G Sbjct: 122 GHVKFKDGHIWGTKSG 137 >A5ZTV3.1 A5ZTV3_9FIRM Putative uncharacterized protein Length = 483 Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 73/139 (52%), Positives = 87/139 (62%), Gaps = 2/139 (1%) Query: 12 MAKKQGFNPYLPSWEYIPDGEPYVFEGRVYVYGSHDRFNGHAFCLNDYVCWSAPEDNLAD 71 M KQ NPY+PSWEY+PD EP+V RVYVYGSHD FNG FCL DYVCWSAP D+L + Sbjct: 1 MKTKQAVNPYMPSWEYVPDAEPHVVGDRVYVYGSHDIFNGLNFCLGDYVCWSAPVDDLGN 60 Query: 72 WRYEGVIYRTTDDPLNPEGSMC--LYAPDVTVGPDGRXXXXXXXXXXXXXXXXXXXXPGG 129 WRYEG IY+ DP P + L APD+ GPDGR P G Sbjct: 61 WRYEGCIYKREQDPAAPRIRLTNGLAAPDMVQGPDGRFYLYYFMGGTKMISVAVCDEPAG 120 Query: 130 KYKFYGYVRYADGTRLGER 148 KY+FYGYV+Y+DG +G++ Sbjct: 121 KYEFYGYVKYSDGIAIGKK 139 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.143 0.474 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,008,884,595 Number of extensions: 41522311 Number of successful extensions: 57800 Number of sequences better than 1.0e-05: 14 Number of HSP's gapped: 57800 Number of HSP's successfully gapped: 14 Length of query: 160 Length of database: 3,060,696,203 Length adjustment: 121 Effective length of query: 39 Effective length of database: 1,920,753,388 Effective search space: 74909382132 Effective search space used: 74909382132 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 125 (52.8 bits)