BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0541.0104.p (687 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KFP0.1 B3KFP0_9BACI PTS system, glucose-specific IIBC subunit 927 0.0 A4ILQ2.1 A4ILQ2_GEOTN PTS system, glucose-specific IIABC component 804 0.0 B4BHY5.1 B4BHY5_9BACI PTS system, glucose-specific IIBC subunit 804 0.0 C3BPF5.1 C3BPF5_9BACI Glucose-specific phosphotransferase enzyme... 797 0.0 C5D7Z6.1 C5D7Z6_9BACI PTS system, glucose-specific IIBC subunit 797 0.0 >B3KFP0.1 B3KFP0_9BACI PTS system, glucose-specific IIBC subunit Length = 693 Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/692 (67%), Positives = 532/692 (76%), Gaps = 6/692 (0%) Query: 1 MFKKLFGVLQRVGKALMXXXXXXXXXXXXXXXXNMLVNPDFLQYVPALENDVVQAVATVL 60 MFK+LFGVLQRVGKALM NMLVNPDFLQY P L+ VQA ATV+ Sbjct: 1 MFKRLFGVLQRVGKALMLPVAILPAAGLLLGLGNMLVNPDFLQYAPWLDAAWVQAAATVM 60 Query: 61 MNSGQIVFDNLSLLFXXXXXXXXXXXXXXXXXXXXXXFLXXXXXXXXXXXXXAYVLSWKD 120 MN+GQIVF NLSLLF +L ++ + Sbjct: 61 MNAGQIVFTNLSLLFAVGVAVGLAGGEGVAGLAAIIGYLVMNVTMGSVIGVTPAMVG-TN 119 Query: 121 YAYSSVLGIPTLQTGVFGGILVGILASAMYKRFFRIELPSYLGFFAGKRFVPIMTAVTSX 180 Y Y+SVLGIPTL TGVFGGI+VGILA++MY+RFF+IELPSYLGFFAGKRFVPIMTA TS Sbjct: 120 YEYASVLGIPTLATGVFGGIIVGILAASMYRRFFKIELPSYLGFFAGKRFVPIMTAATSV 179 Query: 181 XXXXXXXXIWPPIQHGLNYVSQSMINTNLTLSAFIFGVIERSLIPFGLHHIFYSPFWYEF 240 IWPPIQ LN S M+ NLTLSAF+FGV+ER LIPFGLHHIFYSPFW+EF Sbjct: 180 LLGLLMVFIWPPIQSALNTASHFMLEQNLTLSAFVFGVVERGLIPFGLHHIFYSPFWFEF 239 Query: 241 GSYVDKAGDLIRGDQRIFMQQLRDGVEFTAGTFTTGKYPFMMFGLPAAALAIYHEARPEN 300 G Y+++AG L+RGDQ IFM QLRDGVEFTAGTF TGKYPFMMFGLPAAALAIYHEARPEN Sbjct: 240 GEYLNQAGQLVRGDQNIFMAQLRDGVEFTAGTFMTGKYPFMMFGLPAAALAIYHEARPEN 299 Query: 301 KRVVGSLMISAALTSFLTGITEPLEFSFLFVAPLLFAVHAVFAGLSFMTMHILNVKIGMT 360 K+ V +M SAALTSFLTGITEPLEFSFLFVAP+LFAVHA+FAGLSFMTMHIL KIGMT Sbjct: 300 KKFVAGIMGSAALTSFLTGITEPLEFSFLFVAPILFAVHALFAGLSFMTMHILGTKIGMT 359 Query: 361 FSGGFIDYMLFGVIPNRTAWWLVIPVGLVLAVIYYFGFRFVIRKFNLRTPGREDPSDDVE 420 FSGG IDYM+FGVIPNRT WW V+ VG ++AVIYYFGFRFVIRKFNLRTPGRE+ S Sbjct: 360 FSGGLIDYMIFGVIPNRTPWWNVLIVGAIMAVIYYFGFRFVIRKFNLRTPGREEASTTEP 419 Query: 421 ETDTENV-SRSGDDLPRNILSALGGKENITHLDACITRLRVEVKDKAGVDKNRLKKLGAS 479 E+DT S +DLP NIL+ALGG+ NI HLDACITRLRVEVKDK VDK RLK+LGAS Sbjct: 420 ESDTGAAGGGSKNDLPSNILTALGGQPNIAHLDACITRLRVEVKDKGHVDKARLKQLGAS 479 Query: 480 GVLEVGNNVQAIFGTRSDTIKSQIQDVMDGRTXXXXXXXXXX----XXELEKQAGEEGAA 535 GVLEVGNN+QAIFGTRSDTIKSQIQD+M G T + E+QAG++G Sbjct: 480 GVLEVGNNIQAIFGTRSDTIKSQIQDIMSGITPTTAPQAAALETMPTAQEEQQAGQDGET 539 Query: 536 IIPEDIVSPVNGELLDITQVPDAVFSQKMTGDGFAFLSDDGKIASPVYGKVFNVFPSKHA 595 ++ E+IVSP +GEL+DI+ VPD VF+++MTGDGFA + +G I SPV G VFNVFPSKHA Sbjct: 540 LVKEEIVSPADGELMDISHVPDPVFAERMTGDGFAIVPHNGTIVSPVNGTVFNVFPSKHA 599 Query: 596 VGIMSDGGKEVLVHIGVNTVKLKGKGFTVLVEEGDLVAAGQPIMEVDLEYVKANAPSVIS 655 VGIMSDGGKEVLVHIGVNTVKLKG+GF VLV+EGDLV+ GQPIM+VDL+YVK NA S+IS Sbjct: 600 VGIMSDGGKEVLVHIGVNTVKLKGQGFEVLVQEGDLVSTGQPIMQVDLDYVKENAKSIIS 659 Query: 656 PVIFSNLPEGSAVTLKKPGKVVIGDKDIISIM 687 P+IFSNLPEG++V L K G+V G++ II+++ Sbjct: 660 PIIFSNLPEGASVKLNKTGEVKSGEEGIITLL 691 >A4ILQ2.1 A4ILQ2_GEOTN PTS system, glucose-specific IIABC component Length = 671 Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/684 (58%), Positives = 486/684 (71%), Gaps = 15/684 (2%) Query: 3 KKLFGVLQRVGKALMXXXXXXXXXXXXXXXXNMLVNPDFLQYVPALENDVVQAVATVLMN 62 K+ FG LQRVGKALM N L NP +PAL+ D V ++ V+ Sbjct: 2 KQAFGTLQRVGKALMLPVAILPAAGILLAIGNALKNPALTDKIPALKADWVVLISNVMEQ 61 Query: 63 SGQIVFDNLSLLFXXXXXXXXXXXXXXXXXXXXXXFLXXXXXXXXXXXXXAYVLSWKDYA 122 +G IVF NLSLLF +L A ++ D + Sbjct: 62 AGGIVFSNLSLLFAVGVAIGLAGGEGVAGLAAIIGYLIMNVTMSVVLNVNADMVG-NDPS 120 Query: 123 YSSVLGIPTLQTGVFGGILVGILASAMYKRFFRIELPSYLGFFAGKRFVPIMTAVTSXXX 182 ++++LGIPTLQTGVFGGI+VGILA+ MY ++F IELP YLGFFAGKRFVPI+TA ++ Sbjct: 121 FANILGIPTLQTGVFGGIIVGILAAYMYNKYFNIELPQYLGFFAGKRFVPIVTAASAVVL 180 Query: 183 XXXXXXIWPPIQHGLNYVSQSMINTNLTLSAFIFGVIERSLIPFGLHHIFYSPFWYEFGS 242 IWPPIQHGLN S +MI+TN T++AFIFGVIER+LIPFGLHHIFYSPFW+EFG Sbjct: 181 GIIMTFIWPPIQHGLNAFSHNMIDTNKTVAAFIFGVIERALIPFGLHHIFYSPFWFEFGE 240 Query: 243 YVDKAGDLIRGDQRIFMQQLRDGVEFTAGTFTTGKYPFMMFGLPAAALAIYHEARPENKR 302 YV+KAG +IRGDQ+IF +QL+DGVE TAGTF TGK+PFMMFGLPAAALAIYHEARPENK+ Sbjct: 241 YVNKAGQIIRGDQKIFFEQLKDGVELTAGTFMTGKFPFMMFGLPAAALAIYHEARPENKK 300 Query: 303 VVGSLMISAALTSFLTGITEPLEFSFLFVAPLLFAVHAVFAGLSFMTMHILNVKIGMTFS 362 +V +M SAALTSFLTGITEP+EFSFLFVAP LFA+H VFAGLSFM MH+LN+KIGMTFS Sbjct: 301 IVAGIMGSAALTSFLTGITEPIEFSFLFVAPALFAIHCVFAGLSFMIMHLLNIKIGMTFS 360 Query: 363 GGFIDYMLFGVIPNRTAWWLVIPVGLVLAVIYYFGFRFVIRKFNLRTPGREDPSDDVEET 422 GG ID++LFGV+PNRTAWWLVIP+GL AVIYYFGFRF IRK+NL TPGRE D Sbjct: 361 GGVIDFLLFGVLPNRTAWWLVIPIGLAFAVIYYFGFRFAIRKWNLATPGREKTGD----- 415 Query: 423 DTENVSRSGDDLPRNILSALGGKENITHLDACITRLRVEVKDKAGVDKNRLKKLGASGVL 482 +T + DLP +L+ALGGKENI HLDACITRLRV V+D V+K+RLK+LGA+GVL Sbjct: 416 ETPKAEAATGDLPYEVLAALGGKENIEHLDACITRLRVSVRDIGQVNKDRLKELGAAGVL 475 Query: 483 EVGNNVQAIFGTRSDTIKSQIQDVMDGRTXXXXXXXXXXXXELEKQAGEEGAAIIPEDIV 542 EVGNNVQAIFG +SD +K QI D+M G+ E+ E A E I Sbjct: 476 EVGNNVQAIFGPKSDILKGQIHDIMQGKVPTKVK---------EEPKEETPATTQAEAIA 526 Query: 543 SPVNGELLDITQVPDAVFSQKMTGDGFAFLSDDGKIASPVYGKVFNVFPSKHAVGIMSDG 602 SP+ GE++ + VPD VFSQKM GDGFA + DG + SPV G + NVFP+KHA+GI S G Sbjct: 527 SPLAGEIVPLADVPDQVFSQKMMGDGFAVMPTDGTVVSPVDGNIINVFPTKHAIGIKSAG 586 Query: 603 GKEVLVHIGVNTVKLKGKGFTVLVEEGDLVAAGQPIMEVDLEYVKANAPSVISPVIFSNL 662 G E+L+H G++TVKL G+GF LV+EGD V GQPI+ VDL+YVK NAPS+++PVIF+NL Sbjct: 587 GHEILIHFGIDTVKLNGEGFEALVKEGDEVKKGQPILRVDLDYVKNNAPSIVTPVIFTNL 646 Query: 663 PEGSAVTLKKPGKVVIGDKDIISI 686 G AV +KK G V G+ ++ I Sbjct: 647 QAGQAVHIKKQGAVSQGEDGVVEI 670 >B4BHY5.1 B4BHY5_9BACI PTS system, glucose-specific IIBC subunit Length = 671 Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/684 (58%), Positives = 486/684 (71%), Gaps = 15/684 (2%) Query: 3 KKLFGVLQRVGKALMXXXXXXXXXXXXXXXXNMLVNPDFLQYVPALENDVVQAVATVLMN 62 K+ FG LQRVGKALM N L NP +PAL+ D V ++ V+ Sbjct: 2 KQAFGTLQRVGKALMLPVAILPAAGILLAIGNALKNPALTDKIPALKADWVVLISNVMEQ 61 Query: 63 SGQIVFDNLSLLFXXXXXXXXXXXXXXXXXXXXXXFLXXXXXXXXXXXXXAYVLSWKDYA 122 +G IVF NLSLLF +L A ++ D + Sbjct: 62 AGGIVFSNLSLLFAVGVAIGLAGGEGVAGLAAIIGYLIMNVTMSVVLNVNADMVG-NDPS 120 Query: 123 YSSVLGIPTLQTGVFGGILVGILASAMYKRFFRIELPSYLGFFAGKRFVPIMTAVTSXXX 182 ++++LGIPTLQTGVFGGI+VGILA+ MY ++F IELP YLGFFAGKRFVPI+TA ++ Sbjct: 121 FANILGIPTLQTGVFGGIIVGILAAYMYNKYFNIELPQYLGFFAGKRFVPIVTAASAVVL 180 Query: 183 XXXXXXIWPPIQHGLNYVSQSMINTNLTLSAFIFGVIERSLIPFGLHHIFYSPFWYEFGS 242 IWPPIQHGLN S +MI+TN T++AFIFGVIER+LIPFGLHHIFYSPFW+EFG Sbjct: 181 GIIMTFIWPPIQHGLNAFSHNMIDTNKTVAAFIFGVIERALIPFGLHHIFYSPFWFEFGE 240 Query: 243 YVDKAGDLIRGDQRIFMQQLRDGVEFTAGTFTTGKYPFMMFGLPAAALAIYHEARPENKR 302 YV+KAG +IRGDQ+IF +QL+DGVE TAGTF TGK+PFMMFGLPAAALAIYHEARPENK+ Sbjct: 241 YVNKAGQIIRGDQKIFFEQLKDGVELTAGTFMTGKFPFMMFGLPAAALAIYHEARPENKK 300 Query: 303 VVGSLMISAALTSFLTGITEPLEFSFLFVAPLLFAVHAVFAGLSFMTMHILNVKIGMTFS 362 +V +M SAALTSFLTGITEP+EFSFLFVAP LFA+H VFAGLSFM MH+LN+KIGMTFS Sbjct: 301 IVAGIMGSAALTSFLTGITEPIEFSFLFVAPALFAIHCVFAGLSFMIMHLLNIKIGMTFS 360 Query: 363 GGFIDYMLFGVIPNRTAWWLVIPVGLVLAVIYYFGFRFVIRKFNLRTPGREDPSDDVEET 422 GG ID++LFGV+PNRTAWWLVIP+GL AVIYYFGFRF IRK+NL TPGRE D Sbjct: 361 GGVIDFLLFGVLPNRTAWWLVIPIGLAFAVIYYFGFRFAIRKWNLATPGREKTGD----- 415 Query: 423 DTENVSRSGDDLPRNILSALGGKENITHLDACITRLRVEVKDKAGVDKNRLKKLGASGVL 482 +T + DLP +L+ALGGKENI HLDACITRLRV V+D V+K+RLK+LGA+GVL Sbjct: 416 ETPKAEAATGDLPYEVLAALGGKENIEHLDACITRLRVSVRDIGQVNKDRLKELGAAGVL 475 Query: 483 EVGNNVQAIFGTRSDTIKSQIQDVMDGRTXXXXXXXXXXXXELEKQAGEEGAAIIPEDIV 542 EVGNNVQAIFG +SD +K QI D+M G+ E+ E A E I Sbjct: 476 EVGNNVQAIFGPKSDILKGQIHDIMQGKVPTKVK---------EEPKEETPATTQAEAIA 526 Query: 543 SPVNGELLDITQVPDAVFSQKMTGDGFAFLSDDGKIASPVYGKVFNVFPSKHAVGIMSDG 602 SP+ GE++ + VPD VFSQKM GDGFA + DG + SPV G + NVFP+KHA+GI S G Sbjct: 527 SPLAGEIVPLADVPDQVFSQKMMGDGFAVMPTDGTVVSPVDGNIINVFPTKHAIGIKSAG 586 Query: 603 GKEVLVHIGVNTVKLKGKGFTVLVEEGDLVAAGQPIMEVDLEYVKANAPSVISPVIFSNL 662 G E+L+H G++TVKL G+GF LV+EGD V GQPI+ VDL+YVK NAPS+++PVIF+NL Sbjct: 587 GHEILIHFGIDTVKLNGEGFEALVKEGDEVKKGQPILRVDLDYVKNNAPSIVTPVIFTNL 646 Query: 663 PEGSAVTLKKPGKVVIGDKDIISI 686 G AV +KK G V G+ ++ I Sbjct: 647 QAGQAVHIKKQGAVSQGEDGVVEI 670 >C3BPF5.1 C3BPF5_9BACI Glucose-specific phosphotransferase enzyme IIA component Length = 686 Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/696 (58%), Positives = 488/696 (70%), Gaps = 21/696 (3%) Query: 1 MFKKLFGVLQRVGKALMXXXXXXXXXXXXXXXXNMLVNPDFLQYVPALENDVVQAVATVL 60 MFK +FGVLQ+VGKALM N NP VPAL+ D VA ++ Sbjct: 1 MFKNIFGVLQKVGKALMLPVAILPAAGILLGFGNAFQNPQLTNLVPALKADWFVLVAKIM 60 Query: 61 MNSGQIVFDNLSLLFXXXXXXXXXXXXXXXXXXXXXXFLXXXXXXXXXXXXXAYVL---- 116 SG I+F NL+LLF +L +V Sbjct: 61 EQSGDIIFANLALLFAVGVAIGLAGGDGVAGLAAFVGYLIMNKTMSVFLGVEKFVTIVSD 120 Query: 117 ------SWKDYAYSSVLGIPTLQTGVFGGILVGILASAMYKRFFRIELPSYLGFFAGKRF 170 + D AY++VLGIPTLQTGVFGGILVGILA+ Y ++F IELPSYLGFFAGKRF Sbjct: 121 KVPVKTGFTDQAYANVLGIPTLQTGVFGGILVGILAAYCYNKYFNIELPSYLGFFAGKRF 180 Query: 171 VPIMTAVTSXXXXXXXXXIWPPIQHGLNYVSQSMINTNLTLSAFIFGVIERSLIPFGLHH 230 VPI TA S IWP IQ GLN S MI+ N TL+AF+FG+IERSLIPFGLHH Sbjct: 181 VPIATATFSLLLGIVMCFIWPTIQGGLNAFSHQMIDANKTLAAFVFGLIERSLIPFGLHH 240 Query: 231 IFYSPFWYEFGSYVDKAGDLIRGDQRIFMQQLRDGVEFTAGTFTTGKYPFMMFGLPAAAL 290 IFY+PFW+EFG Y AGD+I GDQ+IFM QL+DGVE TAGTFTTGKYPFMMFGLPAAAL Sbjct: 241 IFYAPFWFEFGQYTSAAGDIIHGDQKIFMAQLKDGVELTAGTFTTGKYPFMMFGLPAAAL 300 Query: 291 AIYHEARPENKRVVGSLMISAALTSFLTGITEPLEFSFLFVAPLLFAVHAVFAGLSFMTM 350 A+YHEARPENK++ ++ SAALTSFLTGITEPLEFSFLFVAP+LF +HA+FAGLSFMTM Sbjct: 301 AMYHEARPENKKLAAGILGSAALTSFLTGITEPLEFSFLFVAPVLFGIHAIFAGLSFMTM 360 Query: 351 HILNVKIGMTFSGGFIDYMLFGVIPNRTAWWLVIPVGLVLAVIYYFGFRFVIRKFNLRTP 410 HIL VKIGMTFSGG ID+MLFGV+P RTAWW VI VGL LAVIYYFGFRF IRK++L+TP Sbjct: 361 HILGVKIGMTFSGGLIDFMLFGVLPGRTAWWWVIVVGLALAVIYYFGFRFAIRKWDLKTP 420 Query: 411 GREDPSDDVEETDTENVSRSGDDLPRNILSALGGKENITHLDACITRLRVEVKDKAGVDK 470 GRE +D TD + +G +LPR +L ALGGKENI LDACITRLRV+V ++ V+K Sbjct: 421 GREVTTD----TDGAGKTEAG-ELPREVLVALGGKENIASLDACITRLRVQVNEQKNVNK 475 Query: 471 NRLKKLGASGVLEVGNNVQAIFGTRSDTIKSQIQDVMDGRTXXXXXXXXXXXXELEKQAG 530 +RLK+LGA+GVLEVGNN+QAIFG +SDT+KSQI D+M GRT E ++A Sbjct: 476 DRLKELGAAGVLEVGNNIQAIFGPKSDTLKSQIHDIMSGRTPHVEKEKPVKVEETVQKAD 535 Query: 531 EEGAAIIPEDIVSPVNGELLDITQVPDAVFSQKMTGDGFAFLSDDGKIASPVYGKVFNVF 590 E IVSP+ G++L IT+VPD VFS KM GDGFA +G + SPV G++ NVF Sbjct: 536 TN------ETIVSPIEGKILPITEVPDQVFSGKMMGDGFAIEPAEGTVVSPVDGEIVNVF 589 Query: 591 PSKHAVGIMSDGGKEVLVHIGVNTVKLKGKGFTVLVEEGDLVAAGQPIMEVDLEYVKANA 650 P+KHA+GI S+GGKE+L+H G++TVKL G+GF LV +GD V GQP+++VD+ +VK NA Sbjct: 590 PTKHAIGIQSEGGKEILIHFGIDTVKLNGEGFEALVTQGDKVKQGQPLLKVDIAFVKENA 649 Query: 651 PSVISPVIFSNLPEGSAVTLKKPGKVVIGDKDIISI 686 PS+I+P+IF+NL +G V LKK G V G+ DII I Sbjct: 650 PSIITPIIFTNLGQGQQVELKKEGNVKKGEADIIDI 685 >C5D7Z6.1 C5D7Z6_9BACI PTS system, glucose-specific IIBC subunit Length = 675 Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust. Identities = 399/684 (58%), Positives = 490/684 (71%), Gaps = 11/684 (1%) Query: 3 KKLFGVLQRVGKALMXXXXXXXXXXXXXXXXNMLVNPDFLQYVPALENDVVQAVATVLMN 62 K+ FG LQ+VGKALM N L NP +PAL+ D V V+ V+ Sbjct: 2 KRAFGTLQKVGKALMLPVAILPAAGILLAFGNALKNPALTDRIPALKADWVVLVSNVMEQ 61 Query: 63 SGQIVFDNLSLLFXXXXXXXXXXXXXXXXXXXXXXFLXXXXXXXXXXXXXAYVLSWKDYA 122 +G IVF NLSLLF +L ++ + A Sbjct: 62 AGGIVFSNLSLLFAVGVAIGLAGGDGVAGLAAIIGYLIMNITMSVILGVTPDMVG-DNPA 120 Query: 123 YSSVLGIPTLQTGVFGGILVGILASAMYKRFFRIELPSYLGFFAGKRFVPIMTAVTSXXX 182 ++++LGIPTLQTGVFGGI+VGILA+ MY ++F IELP YLGFFAGKRFVPI+TA ++ Sbjct: 121 FANILGIPTLQTGVFGGIIVGILAAYMYNKYFNIELPQYLGFFAGKRFVPIITAASAVLL 180 Query: 183 XXXXXXIWPPIQHGLNYVSQSMINTNLTLSAFIFGVIERSLIPFGLHHIFYSPFWYEFGS 242 +WPPIQHGLN S +MI+ N TL+AFIFGVIER+LIPFGLHHIFY+PFW+EFG Sbjct: 181 GIVMTWVWPPIQHGLNAFSHNMIDANKTLAAFIFGVIERALIPFGLHHIFYAPFWFEFGE 240 Query: 243 YVDKAGDLIRGDQRIFMQQLRDGVEFTAGTFTTGKYPFMMFGLPAAALAIYHEARPENKR 302 Y++KAG ++RGDQ+IF +QL+DGV TAGTF TGK+PFMMFGLPAAALAIYHEARPENK+ Sbjct: 241 YINKAGQVVRGDQKIFFEQLKDGVALTAGTFMTGKFPFMMFGLPAAALAIYHEARPENKK 300 Query: 303 VVGSLMISAALTSFLTGITEPLEFSFLFVAPLLFAVHAVFAGLSFMTMHILNVKIGMTFS 362 VV +M SAALTSFLTGITEP+EFSFLFVAP LFA+H +FAGLSFM MH+LNVKIGMTFS Sbjct: 301 VVAGIMGSAALTSFLTGITEPIEFSFLFVAPALFAIHTIFAGLSFMVMHLLNVKIGMTFS 360 Query: 363 GGFIDYMLFGVIPNRTAWWLVIPVGLVLAVIYYFGFRFVIRKFNLRTPGREDPSDDVEET 422 GG ID++LFGV+PNRTAWWLVIPVGLV AVIYYFGFRF IRK++L TPGRE + EE Sbjct: 361 GGVIDFLLFGVLPNRTAWWLVIPVGLVFAVIYYFGFRFAIRKWDLATPGREKTT---EEE 417 Query: 423 DTENVSRSGDDLPRNILSALGGKENITHLDACITRLRVEVKDKAGVDKNRLKKLGASGVL 482 T V+ DDLP +L+ALGGKENI HLDACITRLRV V D VDK+RLK LGA+GVL Sbjct: 418 ST--VNAEADDLPYEVLAALGGKENIAHLDACITRLRVSVNDIKQVDKDRLKALGAAGVL 475 Query: 483 EVGNNVQAIFGTRSDTIKSQIQDVMDGRTXXXXXXXXXXXXELEKQAGEEGAAIIPEDIV 542 EVGNNVQAIFG +SD +K QI+D+M+GR + Q +E A + E I Sbjct: 476 EVGNNVQAIFGPKSDILKGQIKDIMEGRA---PARVKEEPQKTAVQETKESAQV--EAIA 530 Query: 543 SPVNGELLDITQVPDAVFSQKMTGDGFAFLSDDGKIASPVYGKVFNVFPSKHAVGIMSDG 602 SP++GE++ +++VPD VFSQKM GDGFA + DG + SPV GK+ NVFP+KHA+GI S G Sbjct: 531 SPLSGEIVPLSEVPDQVFSQKMMGDGFAIMPTDGTVVSPVDGKIVNVFPTKHAIGIESVG 590 Query: 603 GKEVLVHIGVNTVKLKGKGFTVLVEEGDLVAAGQPIMEVDLEYVKANAPSVISPVIFSNL 662 G E+L+H G++TVKL G+GF V +GD V GQPI+ VDLEYVK NAPS+++P+IF+NL Sbjct: 591 GHEILIHFGIDTVKLNGQGFEAHVNQGDEVKKGQPILSVDLEYVKNNAPSIVTPIIFTNL 650 Query: 663 PEGSAVTLKKPGKVVIGDKDIISI 686 ++ +KK G V G+ I+ I Sbjct: 651 QPNESIHVKKQGAVTKGEDRIVEI 674 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.323 0.141 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,642,725,476 Number of extensions: 153182779 Number of successful extensions: 371652 Number of sequences better than 1.0e-05: 3251 Number of HSP's gapped: 364269 Number of HSP's successfully gapped: 3437 Length of query: 687 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 544 Effective length of database: 1,713,491,058 Effective search space: 932139135552 Effective search space used: 932139135552 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 135 (56.6 bits)