BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0541.0097.p (815 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KB34.1 B3KB34_9BACI Phenylalanyl-tRNA synthetase, beta subunit... 1176 0.0 B1D7E6.1 B1D7E6_9BACL Phenylalanyl-tRNA synthetase, beta subunit... 961 0.0 C0Z9E8.1 C0Z9E8_BREBN Phenylalanyl-tRNA synthetase beta chain EC... 776 0.0 Q2B6R5.1 Q2B6R5_9BACI Phenylalanyl-tRNA synthetase beta subunit ... 757 0.0 C2X300.1 C2X300_BACCE Phenylalanyl-tRNA synthetase beta chain 750 0.0 >B3KB34.1 B3KB34_9BACI Phenylalanyl-tRNA synthetase, beta subunit EC=6.1.1.20 Length = 816 Score = 1176 bits (3041), Expect = 0.0, Method: Compositional matrix adjust. Identities = 578/817 (70%), Positives = 675/817 (82%), Gaps = 3/817 (0%) Query: 1 MKVSTSWLADYISLEGVTAAELADRITTAGIEIDGVERRNKGLSGIVVGYVKSKEKHPDA 60 M+VST WL+DYISLEGVT+ +LA RIT+AGIEID +E+RN+G++ +VVGYVKSKEKHPDA Sbjct: 1 MRVSTDWLSDYISLEGVTSEDLASRITSAGIEIDVIEKRNQGINNVVVGYVKSKEKHPDA 60 Query: 61 DKLNVCIVDAGQGEDLQIVCGAKNVAAGQKVPVALVGAKLPG-LEIKKAKLRGVLSQGMI 119 DKLNVC+VDAGQ EDLQIVCGAKNV AGQKVPVALVGAKLPG L+IKKAKLRGVLSQGMI Sbjct: 61 DKLNVCVVDAGQEEDLQIVCGAKNVDAGQKVPVALVGAKLPGGLDIKKAKLRGVLSQGMI 120 Query: 120 CSAKELGLNDKLLPKELQEGILVLPENTEIGQDILKVLGLNDEILDFDLTPNRSDCLSMI 179 CSAKELG+NDKLLPKELQEGILVLP +TEIG+ I+ VLGLNDEIL+ DLTPNRSDCLSM+ Sbjct: 121 CSAKELGMNDKLLPKELQEGILVLPADTEIGKPIVDVLGLNDEILELDLTPNRSDCLSML 180 Query: 180 GAAYEVSAILGRDLKLPDPAADLVEAGGLASDSISVKIENEEYCRHYSVRYISGVKPAPS 239 G AYEVSAILGR+L LP+P +++E A+D ISV I +E C HY+ RYI+GV APS Sbjct: 181 GTAYEVSAILGRELSLPNPEKEMLEVHDAAADHISVTIGADEQCSHYAARYITGVTIAPS 240 Query: 240 PLWIQNRLMAAGVRPINNIVDITNYVMLEYGQPLHAFDGDKVEGGVLGVRFAREGELLTT 299 PLW+QNRLMAAGVRPINNIVDITNYVMLEYGQPLHAFD D+++ G + VR A GE + T Sbjct: 241 PLWMQNRLMAAGVRPINNIVDITNYVMLEYGQPLHAFDADQLKDGAVHVRLAEAGETMVT 300 Query: 300 LDGQERKLEPQMLVIADGAGKAVALAGVMGGLETEVTEATVNLVLESAKFDGGTVRKTSR 359 LDG ER+LEP MLVI G GK VALAGVMGGL++EVT+ TVN+ LESAKFDGGTVRKTSR Sbjct: 301 LDGAERRLEPHMLVITAG-GKPVALAGVMGGLDSEVTDGTVNIFLESAKFDGGTVRKTSR 359 Query: 360 QLGLRSEASLRFEKEVDPNAVIPALNRAAALIARYAGGTVHTGIVQAGTAAAEEKVLTLS 419 QLGLRSEAS RFEKEVDP AVIPALNRAAAL+A+YAGG+VH GIV+AG+A E V+TLS Sbjct: 360 QLGLRSEASSRFEKEVDPAAVIPALNRAAALMAKYAGGSVHQGIVEAGSAQTEPSVITLS 419 Query: 420 LEKLNRYLGTDLSLLEVKTLLTRLHFKCGDADQGLVEVQVPTRRGDISYDVDLIEEVARL 479 LEKLNRYLGT+LSLLEVKT+ +RLHF GDA QGLV++QVP+RRGDI DVDLIEEVARL Sbjct: 420 LEKLNRYLGTELSLLEVKTIFSRLHFPSGDAGQGLVDIQVPSRRGDIMLDVDLIEEVARL 479 Query: 480 YGYDNIPTTLIEGVTTPGALTSRQFQXXXXXXXXADGGFQEVMGYSFIQPEQSKLFPALA 539 +GYDNIPTT IEG TTPG+LT Q GFQEV+GYSFI P+Q+++F +L+ Sbjct: 480 HGYDNIPTTAIEGPTTPGSLTEAQAIRRSLRRLLTHSGFQEVLGYSFIHPQQAEVFTSLS 539 Query: 540 DGLLPVKLAMPMSEERSVLRTSLIPQLLDIARYNTNRRQSDLALFEIGNVFFTDEEQLTR 599 +G VKLAMPMSE+RSVLRTSL+PQLLDIA YN NR+Q DLALFEIGN+F T EE LT+ Sbjct: 540 EGGKAVKLAMPMSEDRSVLRTSLLPQLLDIAVYNHNRKQPDLALFEIGNLFHTQEETLTK 599 Query: 600 QPRELPVLGLLLSGSRASKQWNVEEQPVDFFDLKGALETVFNYLGL-GDSVSYEGDAPEN 658 QP+E PVLGLLLSG + SKQWNV+ VDFFDLKGALETV +YLG+ D ++YE + P Sbjct: 600 QPQERPVLGLLLSGRKGSKQWNVQPAKVDFFDLKGALETVLDYLGIRADDIAYEANGPAG 659 Query: 659 YHPGRSASIYLQGPEGRVKLGTLGQLHPELQRELDLEDTYVAELLLQPLYSAARTNLQYT 718 +HPGRSAS+Y+ E + LG LGQ+HP+ Q+ELDLEDTY AE+LL+PLY + Y Sbjct: 660 FHPGRSASVYVGQGENKHLLGVLGQIHPKTQQELDLEDTYAAEILLEPLYDLTNARVAYR 719 Query: 719 ELQRFPGIERDIAVVVDSAVPAGHLLASIRENGGTLLQNVQVFDVYTGGKMESGKKSIAI 778 +L RFPG+ERD+A+VV+ V AG L+ IREN G LLQ +QVFDV+TG K+ GKKS+AI Sbjct: 720 DLPRFPGMERDLAIVVNEEVEAGSLMQVIRENAGELLQQIQVFDVFTGSKLGEGKKSVAI 779 Query: 779 SLLYRHTDHTLTDXXXXXXHDKVVSALQQTFGAELRK 815 SL YRH + TLTD +K V+ALQQTFGAELRK Sbjct: 780 SLTYRHQERTLTDEEVAGVTEKAVAALQQTFGAELRK 816 >B1D7E6.1 B1D7E6_9BACL Phenylalanyl-tRNA synthetase, beta subunit EC=6.1.1.20 Length = 815 Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust. Identities = 499/819 (60%), Positives = 605/819 (73%), Gaps = 8/819 (0%) Query: 1 MKVSTSWLADYISLEGVTAAELADRITTAGIEIDGVERRNKGLSGIVVGYVKSKEKHPDA 60 MKVS WL YI L G TA ELA+++T GIEID VE NKG+SG+VVGYVKS+EKHPDA Sbjct: 1 MKVSYQWLNKYIDLTGYTAEELAEKMTRGGIEIDSVESLNKGVSGVVVGYVKSREKHPDA 60 Query: 61 DKLNVCIVDAGQGEDLQIVCGAKNVAAGQKVPVALVGAKLPG-LEIKKAKLRGVLSQGMI 119 DKL+VC +D G GE+LQIVCGAKNV AGQKVPVA++GAKLPG IK+AKLRGV SQGMI Sbjct: 61 DKLSVCKIDVGTGEELQIVCGAKNVDAGQKVPVAMIGAKLPGDFAIKRAKLRGVESQGMI 120 Query: 120 CSAKELGLNDKLLPKELQEGILVLPENTEIGQDILKVLGLNDEILDFDLTPNRSDCLSMI 179 CSAKELG+NDKLLPKE QEGILVLPE+T +G I +VLG+NDE+L+ DLTPNRSDCLSM+ Sbjct: 121 CSAKELGINDKLLPKEQQEGILVLPESTPVGTPIGEVLGINDEVLELDLTPNRSDCLSML 180 Query: 180 GAAYEVSAILGRDLKLPDPAADLVEAGGLASDSISVKIENEEYCRHYSVRYISGVKPAPS 239 G A+E+ A+ GR++++P+PA + A A I+V I E C HYS RYI GVK PS Sbjct: 181 GVAHEIGALTGREVRIPEPAVN--HAADRADSHIAVSISAPEQCSHYSARYIKGVKIGPS 238 Query: 240 PLWIQNRLMAAGVRPINNIVDITNYVMLEYGQPLHAFDGDKVEGGVLGVRFAREGELLTT 299 P W+QNRL+AAGVRPI+N+VD+TN+VMLEYGQPLHAFD D + G + VR A++GE + T Sbjct: 239 PQWLQNRLIAAGVRPISNVVDVTNFVMLEYGQPLHAFDADAITTGRIDVRLAKQGEKIVT 298 Query: 300 LDGQERKLEPQMLVIADGAGKAVALAGVMGGLETEVTEATVNLVLESAKFDGGTVRKTSR 359 LD QER LEPQMLVI DG K VALAGVMGG +EV + TVN++LESAKFDGGTVRKTSR Sbjct: 299 LDDQERTLEPQMLVITDGE-KPVALAGVMGGASSEVNDKTVNILLESAKFDGGTVRKTSR 357 Query: 360 QLGLRSEASLRFEKEVDPNAVIPALNRAAALIARYAGGTVHTGIVQAGTAAAEEKVLTLS 419 QLGLRSE+S+RFEKEVDP VIPALNRAAALIA A G V GIV+A E V+ ++ Sbjct: 358 QLGLRSESSIRFEKEVDPARVIPALNRAAALIAELADGLVAEGIVEAVVTKTEPAVVEVT 417 Query: 420 LEKLNRYLGTDLSLLEVKTLLTRLHF--KCGDADQGLVEVQVPTRRGDISYDVDLIEEVA 477 L+K+N YLGT+LS LEV+T+ RLHF + DA+ V VPTRRGDI+ DVDLIEEVA Sbjct: 418 LDKINGYLGTELSRLEVQTIFDRLHFSYRLSDANDQFA-VTVPTRRGDITRDVDLIEEVA 476 Query: 478 RLYGYDNIPTTLIEGVTTPGALTSRQFQXXXXXXXXADGGFQEVMGYSFIQPEQSKLFPA 537 RL+GYDNIPTT I G TPG LT Q D G EV+ YSF P +++LFP Sbjct: 477 RLFGYDNIPTTPIHGDVTPGGLTKPQTIRRELRRRLTDAGLYEVISYSFTGPSRTELFPE 536 Query: 538 LA-DGLLPVKLAMPMSEERSVLRTSLIPQLLDIARYNTNRRQSDLALFEIGNVFFTDEEQ 596 L L VKLAMPMSE+RSVLRT+LI QL++ A YN NR+ A+FEIG+VF T+EEQ Sbjct: 537 LTGKDLKAVKLAMPMSEDRSVLRTTLIAQLIETATYNRNRKNESSAIFEIGSVFHTEEEQ 596 Query: 597 LTRQPRELPVLGLLLSGSRASKQWNVEEQPVDFFDLKGALETVFNYLGLGDSVSYEGDAP 656 LTR P E L +LL+G+R QWN + +PVDF+D KG LETV + LGL V YE P Sbjct: 597 LTRLPEEKQRLAVLLTGNRVDAQWNRKAEPVDFYDAKGVLETVIDVLGLTSKVRYESAQP 656 Query: 657 ENYHPGRSASIYLQGPEGRVKLGTLGQLHPELQRELDLEDTYVAELLLQPLYSAARTNLQ 716 N+HPGR+A++ + G +G +GQLHP LQ E DL DTYV E+ L LY A T ++ Sbjct: 657 ANFHPGRTAAVIVDTAHGPETIGYVGQLHPTLQHESDLADTYVVEVELGTLYGLADTAIE 716 Query: 717 YTELQRFPGIERDIAVVVDSAVPAGHLLASIRENGGTLLQNVQVFDVYTGGKMESGKKSI 776 Y L R+P ++RDIAVV++ AVPA L A G LL++V+VFDV+TG K+ +GKKS+ Sbjct: 717 YKVLPRYPAMQRDIAVVLEQAVPAAKLTAIAWAVAGELLESVRVFDVFTGEKLGAGKKSV 776 Query: 777 AISLLYRHTDHTLTDXXXXXXHDKVVSALQQTFGAELRK 815 A+SL+YRH D TLTD H KVV+ L+Q+F AELRK Sbjct: 777 ALSLVYRHADRTLTDEEVTELHGKVVAELEQSFAAELRK 815 >C0Z9E8.1 C0Z9E8_BREBN Phenylalanyl-tRNA synthetase beta chain EC=6.1.1.20 Length = 807 Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust. Identities = 412/816 (50%), Positives = 540/816 (66%), Gaps = 12/816 (1%) Query: 1 MKVSTSWLADYISLEGVTAAELADRITTAGIEIDGVERRNKGLSGIVVGYVKSKEKHPDA 60 MKVS WL++Y+ L G T ELA+++T +GIE+D VE RN+G+SG+V+GYVK + KHPDA Sbjct: 1 MKVSYQWLSEYVDLSGTTPQELAEKLTRSGIEVDAVESRNEGVSGVVIGYVKERSKHPDA 60 Query: 61 DKLNVCIVDAGQGEDLQIVCGAKNVAAGQKVPVALVGAKLP-GLEIKKAKLRGVLSQGMI 119 D+LNVC+VDAGQGEDLQIVCGA NV GQKV VAL+GAKLP GL IK++KLRGV SQGMI Sbjct: 61 DRLNVCVVDAGQGEDLQIVCGAANVDQGQKVLVALIGAKLPGGLNIKRSKLRGVESQGMI 120 Query: 120 CSAKELGLNDKLLPKELQEGILVLPENTEIGQDILKVLGLNDEILDFDLTPNRSDCLSMI 179 CSAKELGLNDKLL K+ QEGI+VLP + EIG D + LGL+D +L+ LTPNRSDCLSM+ Sbjct: 121 CSAKELGLNDKLLAKDQQEGIMVLPADAEIGMDAVSYLGLDDYVLELGLTPNRSDCLSML 180 Query: 180 GAAYEVSAILGRDLKLPDPAADLVEAGGLASDSISVKIENEEYCRHYSVRYISGVKPAPS 239 G AYEV+AILG+++ P +L E GG + I VKI+ C Y R+ + K A S Sbjct: 181 GVAYEVAAILGKEVVFPQ--IELTENGG--DNPIQVKIDATNECYQYHGRHFTNAKIATS 236 Query: 240 PLWIQNRLMAAGVRPINNIVDITNYVMLEYGQPLHAFDGDKVEGGVLGVRFAREGELLTT 299 P W++NRLMAAG+RPINN+VD+TNYV+LEYGQPLHAFD +V + VR A EGE L T Sbjct: 237 PQWMKNRLMAAGIRPINNVVDVTNYVLLEYGQPLHAFDATQVADRSIVVRLANEGEKLVT 296 Query: 300 LDGQERKLEPQMLVIADGAGKAVALAGVMGGLETEVTEATVNLVLESAKFDGGTVRKTSR 359 LD QER L+ Q L+IAD K +A+AGVMGG +E+T T ++LE+A F TVR+T+R Sbjct: 297 LDDQERALDAQTLLIADQT-KGLAIAGVMGGANSEITGETSEIILEAAWFTPKTVRRTAR 355 Query: 360 QLGLRSEASLRFEKEVDPNAVIPALNRAAALIARYAGGTVHTGIVQAGTAAAEEKVLTLS 419 LG+R+E +R+EK VD V A RAAALI + +G TV GI A + A V++++ Sbjct: 356 MLGMRTEGCVRWEKGVDQARVQEAGERAAALIQQLSGATVSKGISSAVVSEAAPAVVSVT 415 Query: 420 LEKLNRYLGTDLSLLEVKTLLTRLHFKCGDADQGLVEVQVPTRRGDISYDVDLIEEVARL 479 L K+N++LGTD+S +V + RL F A V VPTRRGDI+ DL+EEVARL Sbjct: 416 LAKINQHLGTDMSASDVSPIFERLQFPYEVAGDKWT-VTVPTRRGDITLPEDLVEEVARL 474 Query: 480 YGYDNIPTTLIEGVTTPGALTSRQFQXXXXXXXXADGGFQEVMGYSFIQPEQSKLFPAL- 538 YGYDNIPT+L G TT G LT Q G E + Y+ + P++ + L Sbjct: 475 YGYDNIPTSLPSGSTTQGQLTKEQQLRRTIRHHLIGTGMNEAISYALVHPDRVEAVAGLH 534 Query: 539 ADGLLPVKLAMPMSEERSVLRTSLIPQLLDIARYNTNRRQSDLALFEIGNVFFTDEEQLT 598 + + PV L MPMSE+ SVLRTSLIP LL+ YN NR+ D+A+FE+G VF T EE LT Sbjct: 535 QEKVNPVALMMPMSEDHSVLRTSLIPSLLETVAYNKNRQNHDVAIFELGRVFLTKEETLT 594 Query: 599 RQPRELPVLGLLLSGSRASKQWNVEEQPVDFFDLKGALETVFNYLGLGDSVSYEGDAPEN 658 + P E + L+G ++ W +QPVDFF KG +E++F LG+ + Sbjct: 595 QLPEERLYVAGALTGQLLTQNWMGAKQPVDFFQTKGIVESLFARLGIQATEYKAVQDIAG 654 Query: 659 YHPGRSASIYLQGPEGRVKLGTLGQLHPELQRELDLEDTYVAELLLQPLYSAARTNLQYT 718 HPGR+A +++ G +LG LGQ+HP ++ DL +TYV +L + L A Y Sbjct: 655 MHPGRTAEVWV----GEKRLGYLGQVHPGTEKAYDLSETYVFQLDVAVLIDVAAEVGHYN 710 Query: 719 ELQRFPGIERDIAVVVDSAVPAGHLLASIRENGGTLLQNVQVFDVYTGGKMESGKKSIAI 778 +L + P + RD+A+VVD V AG L A+IRE G LL++V +FDVY G ++ KKS+A Sbjct: 711 QLPKSPAVTRDLALVVDRNVAAGALEATIREAAGELLESVTLFDVYMGERIAQDKKSMAF 770 Query: 779 SLLYRHTDHTLTDXXXXXXHDKVVSALQQTFGAELR 814 +L++RH + TL D V+ AL+ GAELR Sbjct: 771 ALVFRHAERTLQDEEIQQVTTAVIEALKNNTGAELR 806 >Q2B6R5.1 Q2B6R5_9BACI Phenylalanyl-tRNA synthetase beta subunit EC=6.1.1.20 Length = 804 Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/816 (49%), Positives = 549/816 (67%), Gaps = 15/816 (1%) Query: 1 MKVSTSWLADYISLEGVTAAELADRITTAGIEIDGVERRNKGLSGIVVGYVKSKEKHPDA 60 M VS WL +Y+ L G++AA+LA++IT +GIE++G+E N+G+ G+VVG+V +E+HP+A Sbjct: 1 MLVSYKWLQEYVDLSGISAAQLAEKITKSGIEVEGIEILNEGIKGVVVGHVLEREQHPNA 60 Query: 61 DKLNVCIVDAGQGEDLQIVCGAKNVAAGQKVPVALVGAKLPG-LEIKKAKLRGVLSQGMI 119 DKLN C+VD G +QI+CGA NV GQKV VA VGA LPG +IK+AKLRG S GMI Sbjct: 61 DKLNKCLVDTGGEAPVQIICGAPNVDKGQKVAVATVGAVLPGNFKIKRAKLRGEESNGMI 120 Query: 120 CSAKELGLNDKLLPKELQEGILVLPENTEIGQDILKVLGLNDEILDFDLTPNRSDCLSMI 179 CS +ELG+ KL+ KE EGI V P + E+G+D L++L +D IL+ LTPNR+DCLSM+ Sbjct: 121 CSLQELGIESKLVAKEFSEGIFVFPNDVEVGEDALEMLNRDDHILELGLTPNRADCLSML 180 Query: 180 GAAYEVSAILGRDLKLPDPAADLVEAGGLASDSISVKIENEEYCRHYSVRYISGVKPAPS 239 G AYEV+AILGR++KLP P A E+ ASD I+V +E +E Y + I VK PS Sbjct: 181 GVAYEVAAILGREVKLPSPQA--AESAEKASDYITVNVEAKEDNPLYVAKIIKNVKVGPS 238 Query: 240 PLWIQNRLMAAGVRPINNIVDITNYVMLEYGQPLHAFDGDKVEGGVLGVRFAREGELLTT 299 PLW+Q RLMA G+RP NN+VDITNYV+LEYGQPLHAFD ++ + VR A EGE + T Sbjct: 239 PLWMQTRLMAEGIRPHNNVVDITNYVLLEYGQPLHAFDYGRLGSKEILVRRANEGETIVT 298 Query: 300 LDGQERKLEPQMLVIADGAGKAVALAGVMGGLETEVTEATVNLVLESAKFDGGTVRKTSR 359 LD ERKL + LVI +G+ + VALAGVMGG +EV T ++LESA F GT+RK S+ Sbjct: 299 LDDAERKLSAEHLVITNGS-EPVALAGVMGGANSEVQSDTTTVLLESAYFTAGTIRKASK 357 Query: 360 QLGLRSEASLRFEKEVDPNAVIPALNRAAALIARYAGGTVHTGIVQAGTAAAEEKVLTLS 419 GLRSEAS R+EK VDPN V A RAA L+ +YA G V G V+A + E V+++S Sbjct: 358 DHGLRSEASTRYEKGVDPNRVRAAAERAAELMEKYASGEVLEGSVEADSLTIEPAVISIS 417 Query: 420 LEKLNRYLGTDLSLLEVKTLLTRLHFKCGDADQGLVEVQVPTRRGDISYDVDLIEEVARL 479 LEK+NR LGT+L++ EV+ + RL F+ AD G + V VP+RRGDI+ + DLIEEVARL Sbjct: 418 LEKINRVLGTELAMAEVEDIFARLQFEA-SADNGSITVTVPSRRGDITIEEDLIEEVARL 476 Query: 480 YGYDNIPTTLIEGVTTPGALTSRQFQXXXXXXXXADGGFQEVMGYSFIQPEQSKLFPALA 539 YGYDN+P TL G +TPG+LT Q + G + + Y+ +++ + AL Sbjct: 477 YGYDNLPVTLPSGESTPGSLTEYQKKRRIVRRYLEGAGLYQAVTYALTSEKKAGQY-AL- 534 Query: 540 DGLLPVKLAMPMSEERSVLRTSLIPQLLDIARYNTNRRQSDLALFEIGNVFFTD-EEQLT 598 + P+KLAMPMSE+RS+LR S++PQLL++ +YNT R+ LA++E G+VF ++ E L Sbjct: 535 ESREPIKLAMPMSEDRSILRQSIVPQLLEVLKYNTARQNDSLAVYETGSVFLSNGSESL- 593 Query: 599 RQPRELPVLGLLLSGSRASKQWNVEEQPVDFFDLKGALETVFNYLGLGDSVSYEGDAPEN 658 P E L ++G S W E++PVDFF LKG +E +F LGL V Y+ + + Sbjct: 594 --PEEREHLAAAVTGLWHSHPWQGEKKPVDFFVLKGIVEGLFARLGLEGKVEYQRASVDG 651 Query: 659 YHPGRSASIYLQGPEGRVKLGTLGQLHPELQRELDLEDTYVAELLLQPLYSAARTNLQYT 718 HPGR+A I L G K+G +G +HP ++++LDL++TYV EL L+ + LQY Sbjct: 652 MHPGRTAEIILSGK----KIGFIGGVHPTVEKDLDLKETYVFELSLKDVLGEETAPLQYQ 707 Query: 719 ELQRFPGIERDIAVVVDSAVPAGHLLASIRENGGTLLQNVQVFDVYTGGKMESGKKSIAI 778 + R+P I RDIA+V+DS AG L I+E GG+LL+ V VFD+Y G +ME+GKKS+A Sbjct: 708 AIPRYPSITRDIALVIDSGKEAGELERIIKEAGGSLLKEVAVFDLYEGDRMEAGKKSLAF 767 Query: 779 SLLYRHTDHTLTDXXXXXXHDKVVSALQQTFGAELR 814 SL Y + TLTD HDKV+ A+++ GA LR Sbjct: 768 SLKYFDPEKTLTDEDIAKAHDKVLEAVKEKAGAVLR 803 >C2X300.1 C2X300_BACCE Phenylalanyl-tRNA synthetase beta chain Length = 806 Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/816 (48%), Positives = 545/816 (66%), Gaps = 11/816 (1%) Query: 1 MKVSTSWLADYISLEGVTAAELADRITTAGIEIDGVERRNKGLSGIVVGYVKSKEKHPDA 60 M VS WL +Y+ ++ VTA ELAD+IT +GIE++GVE NKG+ G+VVG+V EKHP+A Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 61 DKLNVCIVDAGQGEDLQIVCGAKNVAAGQKVPVALVGAKLPG-LEIKKAKLRGVLSQGMI 119 DKL+ C++D G+ E +QI+CGA NVA G KVPVA VGA LPG +IKKAKLRG S GM+ Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANVAKGLKVPVAKVGAVLPGNFKIKKAKLRGEASHGMV 120 Query: 120 CSAKELGLNDKLLPKELQEGILVLPENTEIGQDILKVLGLNDEILDFDLTPNRSDCLSMI 179 C+ +ELG++ KL+ KE +GI + P + E+G D L++L L+DE+L+ LTPNR+DCL+M+ Sbjct: 121 CALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNML 180 Query: 180 GAAYEVSAILGRDLKLPDPAADLVEAGGLASDSISVKIENEEYCRHYSVRYISGVKPAPS 239 G AYEV+AI GR++KLP A DL E SD ISV +E +E Y + + VK PS Sbjct: 181 GVAYEVAAIYGREVKLP--AIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPS 238 Query: 240 PLWIQNRLMAAGVRPINNIVDITNYVMLEYGQPLHAFDGDKVEGGVLGVRFAREGELLTT 299 P+W+Q RLMAAG+RPI+N+VDITNY+++EYGQPLHAFD DK+ + VR A+EGE + T Sbjct: 239 PMWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIET 298 Query: 300 LDGQERKLEPQMLVIADGAGKAVALAGVMGGLETEVTEATVNLVLESAKFDGGTVRKTSR 359 LD QER L+ LVI +G KA+A+AGVMGG ++EVT TVN+++ESA F G TVR+TS+ Sbjct: 299 LDDQERTLQEHHLVITNGT-KALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSK 357 Query: 360 QLGLRSEASLRFEKEVDPNAVIPALNRAAALIARYAGGTVHTGIVQAGTAAAEEKVLTLS 419 LGLRSE+S RFEK +DP A+ AAAL+A+YAGG G+V+A +E+ ++++ Sbjct: 358 DLGLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVT 417 Query: 420 LEKLNRYLGTDLSLLEVKTLLTRLHFKCGDADQGLVEVQVPTRRGDISYDVDLIEEVARL 479 EK+NR LGTD+S E+ T+ T L F + +G V VP RR DI+ DL+EEV RL Sbjct: 418 AEKVNRVLGTDISASEMGTMFTNLKFPFTEV-EGTFHVNVPARRPDITISEDLVEEVGRL 476 Query: 480 YGYDNIPTTLIEGVTTPGALTSRQFQXXXXXXXXADGGFQEVMGYSFIQPEQSKLFPALA 539 YGYD+IP TL G T G LTS Q + G E + YS +++K + Sbjct: 477 YGYDHIPVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 540 DGLLPVKLAMPMSEERSVLRTSLIPQLLDIARYNTNRRQSDLALFEIGNVFFTDEEQLTR 599 + PV LA+PMSEERS LR SL+PQLL+ YN R+ +AL+E+G++F E Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTE--AGE 594 Query: 600 QPRELPVLGLLLSGSRASKQWNVEEQPVDFFDLKGALETVFNYLGLGDSVSYEGDAPENY 659 P+E L +++G W E++ VDFF +KG LE +F+ LG+ + ++Y E Sbjct: 595 LPKEEQHLAGVMTGLALHHAWQGEKKVVDFFVMKGVLEGLFDVLGVANQIAYAPAKREGM 654 Query: 660 HPGRSASIYLQGPEGRVKLGTLGQLHPELQRELDLEDTYVAELLLQPLYSAARTNLQYTE 719 HPGR+A I L G +G +GQLHPE Q++LD++DT+V EL L ++ A Y+ Sbjct: 655 HPGRTADIVLDGE----VIGFIGQLHPESQKQLDVKDTFVFELSLVKVFGADVEETYYSP 710 Query: 720 LQRFPGIERDIAVVVDSAVPAGHLLASIRENGGTLLQNVQVFDVYTGGKMESGKKSIAIS 779 + RFP + RD+AVVV + AG + I E GG LL++V +FD+Y G KME GKKS+A S Sbjct: 711 IPRFPSMTRDMAVVVTTETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEEGKKSLAFS 770 Query: 780 LLYRHTDHTLTDXXXXXXHDKVVSALQQTFGAELRK 815 + Y + TLTD H++V++A+++ FGAELRK Sbjct: 771 MNYFDAERTLTDEEVTEAHNRVLTAVEEKFGAELRK 806 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.136 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,749,194,552 Number of extensions: 205511690 Number of successful extensions: 528442 Number of sequences better than 1.0e-05: 1991 Number of HSP's gapped: 513702 Number of HSP's successfully gapped: 2072 Length of query: 815 Length of database: 3,060,696,203 Length adjustment: 144 Effective length of query: 671 Effective length of database: 1,704,070,043 Effective search space: 1143430998853 Effective search space used: 1143430998853 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 136 (57.0 bits)