BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0541.0080.p (406 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KB47.1 B3KB47_9BACI Aminotransferase class I and II 685 0.0 B1D7C5.1 B1D7C5_9BACL Aminotransferase class I and II 632 e-179 B1D4T5.1 B1D4T5_9BACL Aminotransferase class I and II 531 e-149 A9U6C8.1 A9U6C8_PHYPA Predicted protein (Fragment) 528 e-148 Q2RJ87.1 Q2RJ87_MOOTA Aminotransferase EC=2.6.1.- 528 e-148 >B3KB47.1 B3KB47_9BACI Aminotransferase class I and II Length = 401 Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/401 (81%), Positives = 358/401 (89%) Query: 1 MITNNSQQTGDTGKSMHSYLAPLVQQIQPSGIRKFFDLAAGSKDIISLGVGEPDFKTPWH 60 MI N Q + KSM SYLAP V+ IQPSGIRKFFDL +G+KDII+LGVGEPDF TPWH Sbjct: 1 MILNEQQLAENNRKSMSSYLAPRVRDIQPSGIRKFFDLVSGNKDIITLGVGEPDFVTPWH 60 Query: 61 VREACVYSLERGFTGYTSNAGMPELREGIAEYLHTRFAVEYNPANEIIATVGGSEAIDLA 120 VREACVYSLERGFTGYTSNAGMPELRE IAEYL+ F V YNPANEII TVGGSEAIDLA Sbjct: 61 VREACVYSLERGFTGYTSNAGMPELREAIAEYLNDSFHVTYNPANEIIVTVGGSEAIDLA 120 Query: 121 LRALISPGDEILIPEPCYISYSPITAIGGGIPVGIETFGENNFKLTAEGLEAKITPRSKI 180 LRALI PGDEILIPEPCYISYSPI +IGGG+PVGIET E++FKLTAE LEA+ITP+SKI Sbjct: 121 LRALIVPGDEILIPEPCYISYSPIASIGGGVPVGIETTAEHHFKLTAEALEAQITPKSKI 180 Query: 181 LILCYPSNPTGAIMSREDWEPIARIVEKHDLIVISDEIYAELTYSGNHVSFASLPGMKDR 240 LILCYPSNPTGAIM+ EDW PIA +VEKHDLIVISDEIYAELTY G HVSFAS+PGM DR Sbjct: 181 LILCYPSNPTGAIMTYEDWLPIAEVVEKHDLIVISDEIYAELTYEGKHVSFASMPGMMDR 240 Query: 241 TILVSGFSKAFAMTGWRMGYACGHPDLIAAMLKIHQYTVMCAPSMGQVAALEALTNGMEE 300 TILVSGFSKAFAMTGWRMGY C H DLIAAMLKIHQYTVMCAP+MGQVAALEAL NGM E Sbjct: 241 TILVSGFSKAFAMTGWRMGYVCAHTDLIAAMLKIHQYTVMCAPAMGQVAALEALRNGMGE 300 Query: 301 KDRMVDSYNQRRRLIVKGLRDAGLECHEPQGAFYAFPSIRRTGLTSDEFAQRLLLEHKVA 360 KDRMV+SYNQRRRL+V+GLR+ GL+CHEPQGAFYAFPSI+ TGL S+EFAQRLL E KVA Sbjct: 301 KDRMVESYNQRRRLVVQGLREIGLDCHEPQGAFYAFPSIKGTGLGSEEFAQRLLTEAKVA 360 Query: 361 AVPGSVFGLGGEGYLRCSYATSVSQLNEAVERIGAFVSQLE 401 AVPG+ FGLGGEG++RCSYATS++QLNEA+ER+G FV +++ Sbjct: 361 AVPGTAFGLGGEGFIRCSYATSIAQLNEALERMGNFVEKIK 401 >B1D7C5.1 B1D7C5_9BACL Aminotransferase class I and II Length = 400 Score = 632 bits (1631), Expect = e-179, Method: Compositional matrix adjust. Identities = 300/401 (74%), Positives = 345/401 (86%), Gaps = 7/401 (1%) Query: 2 ITNNSQQTGDTGKSMHSYLAPLVQQIQPSGIRKFFDLAAGSKDIISLGVGEPDFKTPWHV 61 +T+N +Q SM YL+PL + I+PSGIR+FFDL + KD+I+LGVGEPDF TPWHV Sbjct: 6 VTSNHRQ------SMADYLSPLARSIKPSGIRRFFDLVSTRKDVITLGVGEPDFVTPWHV 59 Query: 62 REACVYSLERGFTGYTSNAGMPELREGIAEYLHTRFAVEYNPANEIIATVGGSEAIDLAL 121 R+A VY+LE+G T YTSNAGMPELRE I +YL+ FAV YNPANE++ TVGGSEAIDLAL Sbjct: 60 RDAAVYALEKGKTQYTSNAGMPELREAIGQYLNDSFAVSYNPANEVLVTVGGSEAIDLAL 119 Query: 122 RALISPGDEILIPEPCYISYSPITAIGGGIPVGIETFGENNFKLTAEGLEAKITPRSKIL 181 RALISPGDEILIPEPCYISYSPIT + GG VGIETF ++NFKL AE L A ITP+SK+L Sbjct: 120 RALISPGDEILIPEPCYISYSPITTLSGGKAVGIETFAKDNFKLKAESLRAAITPKSKVL 179 Query: 182 ILCYPSNPTGAIMSREDWEPIARIVEKHDLIVISDEIYAELTYSGNHVSFASLPGMKDRT 241 ILCYPSNPTG IM+ EDW PIA++VE++DLIVISDEIYAELTY HVSFA++PGMKDRT Sbjct: 180 ILCYPSNPTGGIMTYEDWLPIAKVVEENDLIVISDEIYAELTYGSKHVSFAAIPGMKDRT 239 Query: 242 ILVSGFSKAFAMTGWRMGYACGHPDLIAAMLKIHQYTVMCAPSMGQVAALEALT-NGMEE 300 +LVSGFSKAFAMTGWRMGYACGH DLI AMLKIHQYTVMCAP M Q AALEALT +G+EE Sbjct: 240 LLVSGFSKAFAMTGWRMGYACGHQDLIGAMLKIHQYTVMCAPIMAQYAALEALTPHGLEE 299 Query: 301 KDRMVDSYNQRRRLIVKGLRDAGLECHEPQGAFYAFPSIRRTGLTSDEFAQRLLLEHKVA 360 KDRM++SYNQRRRL+VKG R+ GLECHEP+GAFYAFPSI TGLTS++FAQRLL E VA Sbjct: 300 KDRMMESYNQRRRLVVKGFREIGLECHEPEGAFYAFPSITSTGLTSEQFAQRLLEEGNVA 359 Query: 361 AVPGSVFGLGGEGYLRCSYATSVSQLNEAVERIGAFVSQLE 401 AVPG VFGLGGEG+LRCSYATSV+QL EA++RIG FV +L+ Sbjct: 360 AVPGDVFGLGGEGHLRCSYATSVAQLTEALDRIGQFVHKLK 400 >B1D4T5.1 B1D4T5_9BACL Aminotransferase class I and II Length = 389 Score = 531 bits (1368), Expect = e-149, Method: Compositional matrix adjust. Identities = 249/383 (65%), Positives = 310/383 (80%) Query: 15 SMHSYLAPLVQQIQPSGIRKFFDLAAGSKDIISLGVGEPDFKTPWHVREACVYSLERGFT 74 + +++ PLV+ + PSGIRKFF+ A G+K+IISLGVGEPDF TP REAC+ +LERG T Sbjct: 3 TTSTWVTPLVRDLPPSGIRKFFNAAEGNKEIISLGVGEPDFATPKAAREACIRALERGRT 62 Query: 75 GYTSNAGMPELREGIAEYLHTRFAVEYNPANEIIATVGGSEAIDLALRALISPGDEILIP 134 YT N G+ ELRE IA YL F V Y PA E++ TVGGSEAIDLA+RAL+ PGDE++IP Sbjct: 63 MYTPNEGLMELREEIAAYLDKSFGVSYEPATEVLVTVGGSEAIDLAMRALLEPGDEMIIP 122 Query: 135 EPCYISYSPITAIGGGIPVGIETFGENNFKLTAEGLEAKITPRSKILILCYPSNPTGAIM 194 P YI+Y+PI + GG+PV +E +FKLTA+ L+ ITPRSK+L + +PSNPTGA+M Sbjct: 123 VPGYIAYAPICKLNGGVPVELEMTAAQSFKLTADALKQAITPRSKVLFVNFPSNPTGAVM 182 Query: 195 SREDWEPIARIVEKHDLIVISDEIYAELTYSGNHVSFASLPGMKDRTILVSGFSKAFAMT 254 S EDW PI ++VE+H+LIV+SDEIYAELTY G H+SFASLPGMKDRT+++SGFSKAFAMT Sbjct: 183 SYEDWLPITKLVEEHNLIVLSDEIYAELTYEGKHISFASLPGMKDRTVVISGFSKAFAMT 242 Query: 255 GWRMGYACGHPDLIAAMLKIHQYTVMCAPSMGQVAALEALTNGMEEKDRMVDSYNQRRRL 314 G R+GYACG +LIAAM KIHQYT +CAP +GQVAA+E L N ME+KD MV+++NQRRR+ Sbjct: 243 GMRVGYACGGQELIAAMTKIHQYTALCAPIVGQVAAIECLRNCMEDKDEMVEAFNQRRRM 302 Query: 315 IVKGLRDAGLECHEPQGAFYAFPSIRRTGLTSDEFAQRLLLEHKVAAVPGSVFGLGGEGY 374 VKGL + GL C +PQGAFYAFPSI TGL+S++FA RLL E KVAAVPGSVFG GGEG+ Sbjct: 303 FVKGLSELGLACRDPQGAFYAFPSIGATGLSSEQFATRLLQEAKVAAVPGSVFGRGGEGF 362 Query: 375 LRCSYATSVSQLNEAVERIGAFV 397 +RCSYA+S S L+EA+ERIG ++ Sbjct: 363 IRCSYASSASNLSEALERIGRWM 385 >A9U6C8.1 A9U6C8_PHYPA Predicted protein (Fragment) Length = 326 Score = 528 bits (1361), Expect = e-148, Method: Compositional matrix adjust. Identities = 247/324 (76%), Positives = 278/324 (85%) Query: 16 MHSYLAPLVQQIQPSGIRKFFDLAAGSKDIISLGVGEPDFKTPWHVREACVYSLERGFTG 75 M YL+P + I+PSGIR+FFDLA KD+I+LGVGEPDF TPWHVR+ACV SLE G T Sbjct: 1 MSDYLSPSARAIKPSGIRRFFDLANSRKDVITLGVGEPDFVTPWHVRDACVASLEAGKTQ 60 Query: 76 YTSNAGMPELREGIAEYLHTRFAVEYNPANEIIATVGGSEAIDLALRALISPGDEILIPE 135 YTSNAG PELR I +YL+ F+V Y+PA EI+ TVGGSEAIDLALRALISPGDEIL+PE Sbjct: 61 YTSNAGTPELRGAIGQYLNDSFSVAYDPAKEILVTVGGSEAIDLALRALISPGDEILVPE 120 Query: 136 PCYISYSPITAIGGGIPVGIETFGENNFKLTAEGLEAKITPRSKILILCYPSNPTGAIMS 195 P YISYSPIT + GG+ VG+ETF E+ FKL A+ L A ITPRSKILIL YPSNPTG IM+ Sbjct: 121 PSYISYSPITTLSGGVAVGVETFAEHAFKLQADTLRAAITPRSKILILSYPSNPTGGIMT 180 Query: 196 REDWEPIARIVEKHDLIVISDEIYAELTYSGNHVSFASLPGMKDRTILVSGFSKAFAMTG 255 EDW PIA++VE+HDL+VISDEIYAELTY HVSFAS+PGMKDRTILVSGFSKAFAMTG Sbjct: 181 YEDWLPIAKVVEEHDLVVISDEIYAELTYGSKHVSFASMPGMKDRTILVSGFSKAFAMTG 240 Query: 256 WRMGYACGHPDLIAAMLKIHQYTVMCAPSMGQVAALEALTNGMEEKDRMVDSYNQRRRLI 315 WR+GYACGHP+LI MLKIHQYTVMCA +M QVAALEALTNGMEE RM++SYNQRRRL+ Sbjct: 241 WRIGYACGHPELIGTMLKIHQYTVMCASNMAQVAALEALTNGMEEMYRMMESYNQRRRLV 300 Query: 316 VKGLRDAGLECHEPQGAFYAFPSI 339 VKGLRD GL+CHEPQGAFYAFPSI Sbjct: 301 VKGLRDIGLQCHEPQGAFYAFPSI 324 >Q2RJ87.1 Q2RJ87_MOOTA Aminotransferase EC=2.6.1.- Length = 404 Score = 528 bits (1360), Expect = e-148, Method: Compositional matrix adjust. Identities = 242/387 (62%), Positives = 308/387 (79%) Query: 13 GKSMHSYLAPLVQQIQPSGIRKFFDLAAGSKDIISLGVGEPDFKTPWHVREACVYSLERG 72 G ++ P+V+ + PSGIR+FF+L A +K +ISLGVGEPDF TPWH+REACV SLERG Sbjct: 6 GFEARRFITPVVRDLPPSGIRRFFELVASTKGVISLGVGEPDFVTPWHIREACVQSLERG 65 Query: 73 FTGYTSNAGMPELREGIAEYLHTRFAVEYNPANEIIATVGGSEAIDLALRALISPGDEIL 132 +T YTSN G+PELR IA+YL RF + Y+P +I+ T+G SEA+DLALR +++PGDE+L Sbjct: 66 YTMYTSNYGLPELRRAIADYLAWRFGLTYDPMKQIMVTIGASEAVDLALRTVLNPGDEVL 125 Query: 133 IPEPCYISYSPITAIGGGIPVGIETFGENNFKLTAEGLEAKITPRSKILILCYPSNPTGA 192 IPEPCY+SY PIT + GGIPV I T + F LTA LE ITPRSK+LILC+P+NPTGA Sbjct: 126 IPEPCYVSYQPITQLAGGIPVPIPTTMTDGFALTAARLEHYITPRSKVLILCFPNNPTGA 185 Query: 193 IMSREDWEPIARIVEKHDLIVISDEIYAELTYSGNHVSFASLPGMKDRTILVSGFSKAFA 252 ++SRE+ + IAR+VEK++L+VISDEIYAEL Y G +SFASLPGM++RTILVSGFSKAFA Sbjct: 186 VLSREEMQAIARLVEKYNLLVISDEIYAELRYEGQPLSFASLPGMQERTILVSGFSKAFA 245 Query: 253 MTGWRMGYACGHPDLIAAMLKIHQYTVMCAPSMGQVAALEALTNGMEEKDRMVDSYNQRR 312 MTGWR+GY HPD +AAM+KIHQYT++CAP MGQ+AALEAL +G ++ +RMV+ Y+QRR Sbjct: 246 MTGWRIGYVAAHPDFLAAMVKIHQYTILCAPVMGQMAALEALRHGRQDVERMVEQYDQRR 305 Query: 313 RLIVKGLRDAGLECHEPQGAFYAFPSIRRTGLTSDEFAQRLLLEHKVAAVPGSVFGLGGE 372 RL+ LR+ GL+C EP+GAFY FPSI TGL S FA+ LL E KVA VPG+ FG GE Sbjct: 306 RLVYSRLREMGLDCFEPRGAFYIFPSIAATGLDSVTFAEELLKEEKVAVVPGTAFGASGE 365 Query: 373 GYLRCSYATSVSQLNEAVERIGAFVSQ 399 G++RCSYA S++ L EA+ R+ FV++ Sbjct: 366 GFIRCSYAASLADLTEAMNRMERFVAR 392 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.136 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,487,632,097 Number of extensions: 107541283 Number of successful extensions: 281810 Number of sequences better than 1.0e-05: 11762 Number of HSP's gapped: 258814 Number of HSP's successfully gapped: 11772 Length of query: 406 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 268 Effective length of database: 1,760,596,133 Effective search space: 471839763644 Effective search space used: 471839763644 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)