BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0541.0061.p (509 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KLT1.1 B3KLT1_9BACI Alpha-N-arabinofuranosidase EC=3.2.1.55 785 0.0 O69262.2 O69262_9BACL Alpha-L-arabinofuranosidase EC=3.2.1.55 761 0.0 C3J345.1 C3J345_9BACI Alpha-N-arabinofuranosidase EC=3.2.1.55 759 0.0 B7YCM7.1 B7YCM7_9BACI Alpha-N-arabinofuranosidase EC=3.2.1.55 759 0.0 B3EYN3.1 B3EYN3_BACST Arabinofuranosidase 758 0.0 >B3KLT1.1 B3KLT1_9BACI Alpha-N-arabinofuranosidase EC=3.2.1.55 Length = 497 Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/495 (71%), Positives = 420/495 (84%) Query: 12 MAQRVVLHTDIRKGTINRNIYGHFSEHLGRCIYEGIWVGEDSPIPNTKGIRNDVVEALKE 71 M+Q + +H+D+ KG INRNIYGHFSEHLGRCIYEGIWVGEDSPIPNT+GIRNDV++AL++ Sbjct: 1 MSQVITIHSDVSKGKINRNIYGHFSEHLGRCIYEGIWVGEDSPIPNTEGIRNDVLDALRQ 60 Query: 72 IKVPVLRWPGGCFADEYHWKDGIGAREGRKRMINTHWGGTVENNHFGTHEFMELCAMLEC 131 + +PVLRWPGGCFADEYHWKDG+G RE RK+M+NTHWGG VENNHFGTHEF+ LC +L C Sbjct: 61 LNIPVLRWPGGCFADEYHWKDGVGPRENRKQMVNTHWGGVVENNHFGTHEFLRLCELLGC 120 Query: 132 EPYINGNVGSGTVQEMSEWVEYLTFNGVSPMAELRAKNGREEAWAVKYFGVGNENWGCGG 191 EPYI+GNVGSGTVQEMSEWVEY+TF+GVSPMA R +NGRE+ W VKYFGVGNENWGCGG Sbjct: 121 EPYISGNVGSGTVQEMSEWVEYMTFDGVSPMAAWRQENGREKPWNVKYFGVGNENWGCGG 180 Query: 192 NMRPEYYADLYRQYQTYVRNYGDNRIHRIACGPNADDYQWMEVLMREATRFMDSITLHYY 251 NMRPEYYADLYR+YQTYVRNYG+N+I++IACGPN DDY+WME +MREA +MD+I+LHYY Sbjct: 181 NMRPEYYADLYRRYQTYVRNYGENKIYKIACGPNVDDYRWMETVMREAHPYMDAISLHYY 240 Query: 252 TVPGATWEHKGAATGFDTAEYFTTLEKALRMEELVTRHSVIMDKYDPEKRVGLIVDEWGT 311 T+PG W KG ATGF E+FTT++KAL M+EL+TRHS IMD+YDP KR+GLIVDEWGT Sbjct: 241 TIPGEFWTGKGPATGFSEQEWFTTMKKALHMDELITRHSAIMDQYDPNKRIGLIVDEWGT 300 Query: 312 WYDVEPGTNPGFLYQQNSIRDALVAGLTLNIFHKHSDRVRMANIAQTINVLQAVILTEGE 371 W+DVEPGTNPGFLYQQN+IRDALVAGLTLNIFH+H+DRV MANIAQ +NVLQ+VILTEGE Sbjct: 301 WFDVEPGTNPGFLYQQNTIRDALVAGLTLNIFHEHNDRVVMANIAQIVNVLQSVILTEGE 360 Query: 372 KMLLTPTYHVFNMYKVHQDAELLDLTLDSGSYSFDGKEIPEVSASASVTAEGVIHVSLCN 431 KM+LTPTYHVF+MYKVHQDAE L Y +G++IP+VS +AS G IHVSLCN Sbjct: 361 KMILTPTYHVFDMYKVHQDAERLATHHSGADYEMNGEKIPQVSVTASRDEAGKIHVSLCN 420 Query: 432 LNHASAAVLPLELRGLAGQAVDIAGTTLAGATIDAHNSFSEPEAVVPQPFTAFKLEGDTV 491 ++HA + + ++LRGL+G I G LA ++DAHN+F PE + P FTAF+ EGD + Sbjct: 421 VSHAEQSDVKIQLRGLSGAVKQIVGRQLAADSLDAHNTFESPEVLKPAAFTAFEQEGDVL 480 Query: 492 TVELPAMSVTVLEIT 506 +L MSVTVLEIT Sbjct: 481 RAKLAPMSVTVLEIT 495 >O69262.2 O69262_9BACL Alpha-L-arabinofuranosidase EC=3.2.1.55 Length = 496 Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/497 (72%), Positives = 413/497 (83%), Gaps = 3/497 (0%) Query: 10 IEMAQRVVLHTDIRKGTINRNIYGHFSEHLGRCIYEGIWVGEDSPIPNTKGIRNDVVEAL 69 + +A RVV++ D KGTINRNIYGHFSEHLGRCIYEG+WVGEDSPIPNT GIRNDV+EAL Sbjct: 1 MNVASRVVVNADRVKGTINRNIYGHFSEHLGRCIYEGLWVGEDSPIPNTNGIRNDVLEAL 60 Query: 70 KEIKVPVLRWPGGCFADEYHWKDGIGAREGRKRMINTHWGGTVENNHFGTHEFMELCAML 129 K++K+PVLRWPGGCFADEYHWKDG+G RE RKRM+NTHWGG +ENNHFGTHEFM LC +L Sbjct: 61 KQMKIPVLRWPGGCFADEYHWKDGVGPREKRKRMVNTHWGGVIENNHFGTHEFMMLCELL 120 Query: 130 ECEPYINGNVGSGTVQEMSEWVEYLTFNGVSPMAELRAKNGREEAWAVKYFGVGNENWGC 189 CEPYI+GNVGSGTVQEMSEWVEY+TF+G SPMA R +NGRE+ W +KY+GVGNENWGC Sbjct: 121 GCEPYISGNVGSGTVQEMSEWVEYITFDGESPMANWRRENGREKPWRIKYWGVGNENWGC 180 Query: 190 GGNMRPEYYADLYRQYQTYVRNYGDNRIHRIACGPNADDYQWMEVLMREATRFMDSITLH 249 GGNMR EYYADLYRQ+QTY+RNYGDN++H+IACG N DY W EVLM++A FM ++LH Sbjct: 181 GGNMRAEYYADLYRQFQTYLRNYGDNKLHKIACGANTADYHWTEVLMKQAAPFMHGLSLH 240 Query: 250 YYTVPGATWEHKGAATGFDTAEYFTTLEKALRMEELVTRHSVIMDKYDPEKRVGLIVDEW 309 YYTVPG WE KG ATGF T E++ TL+KAL M+ LVT+HS IMD YDP+KR+ LIVDEW Sbjct: 241 YYTVPGP-WEKKGPATGFTTDEWWVTLKKALFMDRLVTKHSAIMDVYDPDKRIDLIVDEW 299 Query: 310 GTWYDVEPGTNPGFLYQQNSIRDALVAGLTLNIFHKHSDRVRMANIAQTINVLQAVILTE 369 GTWYDVEPGTNPGFLYQQNSIRDALVAG TL+IFH+H DRVRMANIAQ +NVLQ+VILTE Sbjct: 300 GTWYDVEPGTNPGFLYQQNSIRDALVAGATLHIFHRHCDRVRMANIAQLVNVLQSVILTE 359 Query: 370 GEKMLLTPTYHVFNMYKVHQDAELLDLTLDSGSYSFDGKEIPEVSASASVTAEGVIHVSL 429 GE+MLLTPTYHVFNM+KVHQDAELLD T +S + E+P+VS SAS A+G IH+SL Sbjct: 360 GERMLLTPTYHVFNMFKVHQDAELLD-TWESVERTGPEGELPKVSVSASRAADGKIHISL 418 Query: 430 CNLNHASAAVLPLELRGLAGQAVDIAGTTLAGATIDAHNSFSEPEAVVPQPFTAFKLEGD 489 CNL+ + A + +ELRGL G V GTTL ID HN+F EPE V P PF FKLEG Sbjct: 419 CNLDFETGASVDIELRGLNG-GVSATGTTLTSGRIDGHNTFDEPERVKPAPFRDFKLEGG 477 Query: 490 TVTVELPAMSVTVLEIT 506 + LP MSVTVLE+T Sbjct: 478 HLNASLPPMSVTVLELT 494 >C3J345.1 C3J345_9BACI Alpha-N-arabinofuranosidase EC=3.2.1.55 Length = 505 Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/494 (70%), Positives = 405/494 (81%) Query: 12 MAQRVVLHTDIRKGTINRNIYGHFSEHLGRCIYEGIWVGEDSPIPNTKGIRNDVVEALKE 71 M R V++ D+ KGTIN+NIYGHF+EHLGRCIYEGIWVGEDSPIPNT GIRNDV++ALK Sbjct: 1 MRNRAVINVDMPKGTINKNIYGHFAEHLGRCIYEGIWVGEDSPIPNTNGIRNDVLQALKN 60 Query: 72 IKVPVLRWPGGCFADEYHWKDGIGAREGRKRMINTHWGGTVENNHFGTHEFMELCAMLEC 131 IKVPVLRWPGGCFADEYHWKDG+G RE RK+MINTHWGG +ENNHFGTHEFM LC MLEC Sbjct: 61 IKVPVLRWPGGCFADEYHWKDGVGPREQRKKMINTHWGGVIENNHFGTHEFMMLCEMLEC 120 Query: 132 EPYINGNVGSGTVQEMSEWVEYLTFNGVSPMAELRAKNGREEAWAVKYFGVGNENWGCGG 191 EPYI GNVGSGTVQEMSEW+EY+TF+G SPMA R +NGRE+ W +KYFGVGNENWGCGG Sbjct: 121 EPYICGNVGSGTVQEMSEWIEYMTFDGESPMANWRKENGREKPWKLKYFGVGNENWGCGG 180 Query: 192 NMRPEYYADLYRQYQTYVRNYGDNRIHRIACGPNADDYQWMEVLMREATRFMDSITLHYY 251 NMRPEYYADLYR+YQTYVRNYGDN+I++IACG N DDY W EVLM+ A RFMD ++LHYY Sbjct: 181 NMRPEYYADLYRRYQTYVRNYGDNQIYKIACGANVDDYYWTEVLMKNAGRFMDGLSLHYY 240 Query: 252 TVPGATWEHKGAATGFDTAEYFTTLEKALRMEELVTRHSVIMDKYDPEKRVGLIVDEWGT 311 T+PG W KG+AT F E+F TL+KAL ++EL+TRHS IMDKYDPEKRVGLIVDEWGT Sbjct: 241 TIPGDFWLGKGSATDFTEDEWFITLKKALYIDELITRHSTIMDKYDPEKRVGLIVDEWGT 300 Query: 312 WYDVEPGTNPGFLYQQNSIRDALVAGLTLNIFHKHSDRVRMANIAQTINVLQAVILTEGE 371 WYDVEPGTNPGFLYQQN+IRDALVA L +IFH H DRVRMANIAQT+NVLQAVILT GE Sbjct: 301 WYDVEPGTNPGFLYQQNTIRDALVAALHFHIFHNHCDRVRMANIAQTVNVLQAVILTRGE 360 Query: 372 KMLLTPTYHVFNMYKVHQDAELLDLTLDSGSYSFDGKEIPEVSASASVTAEGVIHVSLCN 431 +M+LTPTYHVF+MYKVHQDAELL + Y G+ +P+VS +AS EG +H+SLCN Sbjct: 361 QMILTPTYHVFDMYKVHQDAELLAIESSCAEYEHRGETLPQVSITASKNGEGTVHISLCN 420 Query: 432 LNHASAAVLPLELRGLAGQAVDIAGTTLAGATIDAHNSFSEPEAVVPQPFTAFKLEGDTV 491 ++H + AV+ LE RG + + GT L ++AHN+F +P+AV P+PF +L T+ Sbjct: 421 IDHRNEAVVDLEFRGDSLARKQVFGTMLTANEMNAHNTFEKPDAVKPEPFRQIELGQHTL 480 Query: 492 TVELPAMSVTVLEI 505 +LP MSV L I Sbjct: 481 MAKLPPMSVVTLAI 494 >B7YCM7.1 B7YCM7_9BACI Alpha-N-arabinofuranosidase EC=3.2.1.55 Length = 505 Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/494 (70%), Positives = 405/494 (81%) Query: 12 MAQRVVLHTDIRKGTINRNIYGHFSEHLGRCIYEGIWVGEDSPIPNTKGIRNDVVEALKE 71 M R V++ D+ KGTIN+NIYGHF+EHLGRCIYEGIWVGEDSPIPNT GIRNDV++ALK Sbjct: 1 MRNRAVINVDMPKGTINKNIYGHFAEHLGRCIYEGIWVGEDSPIPNTNGIRNDVLQALKN 60 Query: 72 IKVPVLRWPGGCFADEYHWKDGIGAREGRKRMINTHWGGTVENNHFGTHEFMELCAMLEC 131 IKVPVLRWPGGCFADEYHWKDG+G RE RK+MINTHWGG +ENNHFGTHEFM LC MLEC Sbjct: 61 IKVPVLRWPGGCFADEYHWKDGVGPREQRKKMINTHWGGVIENNHFGTHEFMMLCEMLEC 120 Query: 132 EPYINGNVGSGTVQEMSEWVEYLTFNGVSPMAELRAKNGREEAWAVKYFGVGNENWGCGG 191 EPYI GNVGSGTVQEMSEW+EY+TF+G SPMA R +NGRE+ W +KYFGVGNENWGCGG Sbjct: 121 EPYICGNVGSGTVQEMSEWIEYMTFDGESPMANWRKENGREKPWKLKYFGVGNENWGCGG 180 Query: 192 NMRPEYYADLYRQYQTYVRNYGDNRIHRIACGPNADDYQWMEVLMREATRFMDSITLHYY 251 NMRPEYYADLYR+YQTYVRNYGDN+I++IACG N DDY W EVLM+ A RFMD ++LHYY Sbjct: 181 NMRPEYYADLYRRYQTYVRNYGDNQIYKIACGANVDDYYWTEVLMKNAGRFMDGLSLHYY 240 Query: 252 TVPGATWEHKGAATGFDTAEYFTTLEKALRMEELVTRHSVIMDKYDPEKRVGLIVDEWGT 311 T+PG W KG+AT F E+F TL+KAL ++EL+TRHS IMDKYDPEKRVGLIVDEWGT Sbjct: 241 TIPGDFWLGKGSATDFTEDEWFITLKKALYIDELITRHSTIMDKYDPEKRVGLIVDEWGT 300 Query: 312 WYDVEPGTNPGFLYQQNSIRDALVAGLTLNIFHKHSDRVRMANIAQTINVLQAVILTEGE 371 WYDVEPGTNPGFLYQQN+IRDALVA L +IFH H DRVRMANIAQT+NVLQAVILT GE Sbjct: 301 WYDVEPGTNPGFLYQQNTIRDALVAALHFHIFHNHCDRVRMANIAQTVNVLQAVILTRGE 360 Query: 372 KMLLTPTYHVFNMYKVHQDAELLDLTLDSGSYSFDGKEIPEVSASASVTAEGVIHVSLCN 431 +M+LTPTYHVF+MYKVHQDAELL + Y G+ +P+VS +AS EG +H+SLCN Sbjct: 361 QMILTPTYHVFDMYKVHQDAELLAIESSCAEYEHRGETLPQVSITASKNGEGTVHISLCN 420 Query: 432 LNHASAAVLPLELRGLAGQAVDIAGTTLAGATIDAHNSFSEPEAVVPQPFTAFKLEGDTV 491 ++H + AV+ LE RG + + GT L ++AHN+F +P+AV P+PF +L T+ Sbjct: 421 IDHRNEAVVDLEFRGDSLARKQVFGTMLTANEMNAHNTFEKPDAVKPEPFRQIELGQHTL 480 Query: 492 TVELPAMSVTVLEI 505 +LP MSV L I Sbjct: 481 MAKLPPMSVVTLAI 494 >B3EYN3.1 B3EYN3_BACST Arabinofuranosidase Length = 506 Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/491 (70%), Positives = 404/491 (82%) Query: 15 RVVLHTDIRKGTINRNIYGHFSEHLGRCIYEGIWVGEDSPIPNTKGIRNDVVEALKEIKV 74 R V++ D+ KGTIN+NIYGHF+EHLGRCIYEGIWVGEDSPIPNT GIRNDV++ALK IKV Sbjct: 5 RAVINVDMPKGTINKNIYGHFAEHLGRCIYEGIWVGEDSPIPNTNGIRNDVLQALKNIKV 64 Query: 75 PVLRWPGGCFADEYHWKDGIGAREGRKRMINTHWGGTVENNHFGTHEFMELCAMLECEPY 134 PVLRWPGGCFADEYHWKDG+G RE RK+MINTHWGG +ENNHFGTHEFM LC MLECEPY Sbjct: 65 PVLRWPGGCFADEYHWKDGVGPREQRKKMINTHWGGVIENNHFGTHEFMMLCEMLECEPY 124 Query: 135 INGNVGSGTVQEMSEWVEYLTFNGVSPMAELRAKNGREEAWAVKYFGVGNENWGCGGNMR 194 I GNVGSGTVQEMSEW+EY+TF+G SPMA R +NGRE+ W +KYFGVGNENWGCGGNMR Sbjct: 125 ICGNVGSGTVQEMSEWIEYMTFDGESPMANWRKENGREKPWKLKYFGVGNENWGCGGNMR 184 Query: 195 PEYYADLYRQYQTYVRNYGDNRIHRIACGPNADDYQWMEVLMREATRFMDSITLHYYTVP 254 PEYYADLYR+YQTYVRNYGDN+I++IACG N DDY W EVLM+ A RFMD ++LHYYT+P Sbjct: 185 PEYYADLYRRYQTYVRNYGDNQIYKIACGANVDDYYWTEVLMKNAGRFMDGLSLHYYTIP 244 Query: 255 GATWEHKGAATGFDTAEYFTTLEKALRMEELVTRHSVIMDKYDPEKRVGLIVDEWGTWYD 314 G W KG+AT F E+F TL+KAL ++EL+TRHS IMDKYDPEKRVGLIVDEWGTWYD Sbjct: 245 GDFWLGKGSATDFTEDEWFITLKKALYIDELITRHSTIMDKYDPEKRVGLIVDEWGTWYD 304 Query: 315 VEPGTNPGFLYQQNSIRDALVAGLTLNIFHKHSDRVRMANIAQTINVLQAVILTEGEKML 374 VEPGTNPGFLYQQN+IRDALVA L +IFH H DRVRMANIAQT+NVLQAVILT GE+M+ Sbjct: 305 VEPGTNPGFLYQQNTIRDALVAALHFHIFHNHCDRVRMANIAQTVNVLQAVILTRGEQMI 364 Query: 375 LTPTYHVFNMYKVHQDAELLDLTLDSGSYSFDGKEIPEVSASASVTAEGVIHVSLCNLNH 434 LTPTYHVF+MYKVHQDAELL + Y G+ +P+VS +AS EG +H+SLCN++H Sbjct: 365 LTPTYHVFDMYKVHQDAELLAIESSCAEYEHRGETLPQVSITASKNGEGTVHISLCNIDH 424 Query: 435 ASAAVLPLELRGLAGQAVDIAGTTLAGATIDAHNSFSEPEAVVPQPFTAFKLEGDTVTVE 494 + AV+ LE RG + + GT L ++AHN+F +P+AV P+PF +L T+ + Sbjct: 425 RNEAVVDLEFRGDSLARKQVFGTMLTANEMNAHNTFEKPDAVKPEPFRQIELGQHTLMAK 484 Query: 495 LPAMSVTVLEI 505 LP MSV L I Sbjct: 485 LPPMSVVTLAI 495 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.136 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,271,785,962 Number of extensions: 147311277 Number of successful extensions: 304801 Number of sequences better than 1.0e-05: 372 Number of HSP's gapped: 303802 Number of HSP's successfully gapped: 373 Length of query: 509 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 369 Effective length of database: 1,741,754,103 Effective search space: 642707264007 Effective search space used: 642707264007 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 133 (55.8 bits)