BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0538.0023.p (228 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q893B0.1 Q893B0_CLOTE Regulatory component of sensory transducti... 429 e-118 B9E4E0.1 B9E4E0_CLOK1 Putative uncharacterized protein 420 e-116 A5N0H9.1 A5N0H9_CLOK5 Predicted transcriptional regulator 420 e-116 C3KV00.1 C3KV00_CLOB6 Response regulator 410 e-113 B1QHX1.1 B1QHX1_CLOBO Aspartate aminotransferase EC=2.6.1.1 410 e-113 >Q893B0.1 Q893B0_CLOTE Regulatory component of sensory transduction system Length = 228 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 213/228 (93%), Positives = 218/228 (95%) Query: 1 MKRIFLVEDDKAIAKNLILLLRSEGFTVTHAPTRSEALAALAGNTFDLALIDISLPDGNG 60 MKRIFLVEDDKAIA+NL+LLLRSEGFTVTHAPTRSEA AALAGN FDLALIDISLPDGNG Sbjct: 1 MKRIFLVEDDKAIARNLMLLLRSEGFTVTHAPTRSEAFAALAGNKFDLALIDISLPDGNG 60 Query: 61 FTVCTEIKEMQDVPVIFLTASGDEASVVTGLNIGADDYITKPFRPRELIARIGTALRKSG 120 FTVCTEIKE QDVPVIFLTASGDEASVVTGLN+GADDYITKPFR RELIARIGTALRKSG Sbjct: 61 FTVCTEIKETQDVPVIFLTASGDEASVVTGLNMGADDYITKPFRSRELIARIGTALRKSG 120 Query: 121 RSGSAFEICGLQVDTASGVVKKNGNEVFLSALEYRLLLVFISNPKSIITRGRLLDELWDA 180 RS S FEI GL VDTASG+VKKNGNEVFLSALEYRLLLVFISNPKSIITRGRLLDELWDA Sbjct: 121 RSRSDFEIRGLHVDTASGIVKKNGNEVFLSALEYRLLLVFISNPKSIITRGRLLDELWDA 180 Query: 181 AGEFVNDNTLTVYIKRLREKIENDPGNPQIILTVRGTGYRLGSEYASE 228 AGEFVNDNTLTVYIKRLREKIENDP +PQIILTVRGTGYRLG EYASE Sbjct: 181 AGEFVNDNTLTVYIKRLREKIENDPASPQIILTVRGTGYRLGGEYASE 228 >B9E4E0.1 B9E4E0_CLOK1 Putative uncharacterized protein Length = 228 Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust. Identities = 204/228 (89%), Positives = 216/228 (94%) Query: 1 MKRIFLVEDDKAIAKNLILLLRSEGFTVTHAPTRSEALAALAGNTFDLALIDISLPDGNG 60 MKRIFLVEDDKAIA+NL+LLLRSEGFTVTHAPTRS+A ALAGN FDLALIDISLPDGNG Sbjct: 1 MKRIFLVEDDKAIARNLVLLLRSEGFTVTHAPTRSDAFTALAGNKFDLALIDISLPDGNG 60 Query: 61 FTVCTEIKEMQDVPVIFLTASGDEASVVTGLNIGADDYITKPFRPRELIARIGTALRKSG 120 FTVCTEIKEMQD+PVIFLTASGDEASVVTGLN+GADDYITKPFRPREL+ARI TALRKSG Sbjct: 61 FTVCTEIKEMQDLPVIFLTASGDEASVVTGLNMGADDYITKPFRPRELMARIRTALRKSG 120 Query: 121 RSGSAFEICGLQVDTASGVVKKNGNEVFLSALEYRLLLVFISNPKSIITRGRLLDELWDA 180 RS AFEICG+ VD ASGVVKKNG+EVFLSALEYRLLLVFI+NPKSI+TR RLLDELWDA Sbjct: 121 RSPRAFEICGVHVDMASGVVKKNGSEVFLSALEYRLLLVFINNPKSIVTRSRLLDELWDA 180 Query: 181 AGEFVNDNTLTVYIKRLREKIENDPGNPQIILTVRGTGYRLGSEYASE 228 AGEFVNDNTLTVYIKRLREKIEN+P +PQIILTVRGTGYRLG YASE Sbjct: 181 AGEFVNDNTLTVYIKRLREKIENNPASPQIILTVRGTGYRLGDRYASE 228 >A5N0H9.1 A5N0H9_CLOK5 Predicted transcriptional regulator Length = 228 Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust. Identities = 204/228 (89%), Positives = 216/228 (94%) Query: 1 MKRIFLVEDDKAIAKNLILLLRSEGFTVTHAPTRSEALAALAGNTFDLALIDISLPDGNG 60 MKRIFLVEDDKAIA+NL+LLLRSEGFTVTHAPTRS+A ALAGN FDLALIDISLPDGNG Sbjct: 1 MKRIFLVEDDKAIARNLVLLLRSEGFTVTHAPTRSDAFTALAGNKFDLALIDISLPDGNG 60 Query: 61 FTVCTEIKEMQDVPVIFLTASGDEASVVTGLNIGADDYITKPFRPRELIARIGTALRKSG 120 FTVCTEIKEMQD+PVIFLTASGDEASVVTGLN+GADDYITKPFRPREL+ARI TALRKSG Sbjct: 61 FTVCTEIKEMQDLPVIFLTASGDEASVVTGLNMGADDYITKPFRPRELMARIRTALRKSG 120 Query: 121 RSGSAFEICGLQVDTASGVVKKNGNEVFLSALEYRLLLVFISNPKSIITRGRLLDELWDA 180 RS AFEICG+ VD ASGVVKKNG+EVFLSALEYRLLLVFI+NPKSI+TR RLLDELWDA Sbjct: 121 RSPRAFEICGVHVDMASGVVKKNGSEVFLSALEYRLLLVFINNPKSIVTRSRLLDELWDA 180 Query: 181 AGEFVNDNTLTVYIKRLREKIENDPGNPQIILTVRGTGYRLGSEYASE 228 AGEFVNDNTLTVYIKRLREKIEN+P +PQIILTVRGTGYRLG YASE Sbjct: 181 AGEFVNDNTLTVYIKRLREKIENNPASPQIILTVRGTGYRLGDRYASE 228 >C3KV00.1 C3KV00_CLOB6 Response regulator Length = 226 Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust. Identities = 202/226 (89%), Positives = 212/226 (93%) Query: 1 MKRIFLVEDDKAIAKNLILLLRSEGFTVTHAPTRSEALAALAGNTFDLALIDISLPDGNG 60 MKRIFLVEDDKAI KNLILLLRSEGFTVTHAPTRSEALAAL GN FDLALIDISLPDGNG Sbjct: 1 MKRIFLVEDDKAITKNLILLLRSEGFTVTHAPTRSEALAALVGNKFDLALIDISLPDGNG 60 Query: 61 FTVCTEIKEMQDVPVIFLTASGDEASVVTGLNIGADDYITKPFRPRELIARIGTALRKSG 120 FTVCTEIKE QD+PVIFLTASGDEASVVTGLNIGADDYITKPFRPRELIARI +ALRKSG Sbjct: 61 FTVCTEIKETQDIPVIFLTASGDEASVVTGLNIGADDYITKPFRPRELIARIRSALRKSG 120 Query: 121 RSGSAFEICGLQVDTASGVVKKNGNEVFLSALEYRLLLVFISNPKSIITRGRLLDELWDA 180 S SAFEI G+ VD ASGVVKK+G+EVFLSALEYRLLLVFI+NPKSIITR RLLDELWDA Sbjct: 121 HSPSAFEILGIHVDMASGVVKKDGSEVFLSALEYRLLLVFINNPKSIITRSRLLDELWDA 180 Query: 181 AGEFVNDNTLTVYIKRLREKIENDPGNPQIILTVRGTGYRLGSEYA 226 AGEFVNDNTLTVYIKRLREKIEN+P +PQIILT+RGTGY+LG YA Sbjct: 181 AGEFVNDNTLTVYIKRLREKIENNPASPQIILTIRGTGYKLGDGYA 226 >B1QHX1.1 B1QHX1_CLOBO Aspartate aminotransferase EC=2.6.1.1 Length = 226 Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust. Identities = 202/226 (89%), Positives = 212/226 (93%) Query: 1 MKRIFLVEDDKAIAKNLILLLRSEGFTVTHAPTRSEALAALAGNTFDLALIDISLPDGNG 60 MKRIFLVEDDKAI KNLILLLRSEGFTVTHAPTRSEALAAL GN FDLALIDISLPDGNG Sbjct: 1 MKRIFLVEDDKAITKNLILLLRSEGFTVTHAPTRSEALAALVGNKFDLALIDISLPDGNG 60 Query: 61 FTVCTEIKEMQDVPVIFLTASGDEASVVTGLNIGADDYITKPFRPRELIARIGTALRKSG 120 FTVCTEIKE QD+PVIFLTASGDEASVVTGLNIGADDYITKPFRPRELIARI +ALRKSG Sbjct: 61 FTVCTEIKETQDIPVIFLTASGDEASVVTGLNIGADDYITKPFRPRELIARIRSALRKSG 120 Query: 121 RSGSAFEICGLQVDTASGVVKKNGNEVFLSALEYRLLLVFISNPKSIITRGRLLDELWDA 180 S SAFEI G+ VD ASGVVKK+G+EVFLSALEYRLLLVFI+NPKSIITR RLLDELWDA Sbjct: 121 HSPSAFEILGIHVDMASGVVKKDGSEVFLSALEYRLLLVFINNPKSIITRSRLLDELWDA 180 Query: 181 AGEFVNDNTLTVYIKRLREKIENDPGNPQIILTVRGTGYRLGSEYA 226 AGEFVNDNTLTVYIKRLREKIEN+P +PQIILT+RGTGY+LG YA Sbjct: 181 AGEFVNDNTLTVYIKRLREKIENNPASPQIILTIRGTGYKLGDGYA 226 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.138 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,374,120,052 Number of extensions: 56702024 Number of successful extensions: 244440 Number of sequences better than 1.0e-05: 25804 Number of HSP's gapped: 218515 Number of HSP's successfully gapped: 25908 Length of query: 228 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 97 Effective length of database: 1,826,543,238 Effective search space: 177174694086 Effective search space used: 177174694086 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 129 (54.3 bits)