BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0538.0020.p (861 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C3KUZ7.1 C3KUZ7_CLOB6 ABC transporter ATP-binding protein 1123 0.0 B1QHX4.1 B1QHX4_CLOBO Aspartate-semialdehyde dehydrogenase EC=1.... 1123 0.0 Q893B3.1 Q893B3_CLOTE ABC transporter ATP-binding protein 1110 0.0 Q181I5.1 Q181I5_CLOD6 Putative ABC transporter, permease protein 1073 0.0 Q97LN0.1 Q97LN0_CLOAB Predicted permease, domain duplication 1014 0.0 >C3KUZ7.1 C3KUZ7_CLOB6 ABC transporter ATP-binding protein Length = 857 Score = 1123 bits (2904), Expect = 0.0, Method: Compositional matrix adjust. Identities = 567/863 (65%), Positives = 653/863 (75%), Gaps = 8/863 (0%) Query: 1 MNIFNKVTLQSMKKSRTRTIVTIIGVVLSAAMITGVATFGVSLLNYMANGAAQKYGGWHV 60 MNIFNKVTLQ MKKSRTRTIVT+IGV+LSAAMIT VATFG SLLN++ NG+ KYGGWHV Sbjct: 1 MNIFNKVTLQGMKKSRTRTIVTVIGVILSAAMITAVATFGTSLLNFLVNGSIVKYGGWHV 60 Query: 61 EFVNVDSSFTQERALDKGVANSATVENIGYAKLDGGKNPKKPYLFMAGFSKKAFDTLPIN 120 EF+NVDSSF QER D GVAN+A ENIGYAKLDGGK+P+KPYLF+AGFSK+AFDTLP+ Sbjct: 61 EFLNVDSSFVQERTHDNGVANTAAFENIGYAKLDGGKSPEKPYLFIAGFSKEAFDTLPLT 120 Query: 121 LMSGRLPENSGEILVPMSAEVNSGVNFAEGDTLSLAVGNRMNGNKNLGQHDPYISGKETL 180 L+SGRLP+NSGEIL+P GV F GDTLSLAVG+RMNGNKNLGQH PYI GKE L Sbjct: 121 LVSGRLPKNSGEILIPGHVAAKGGVRFRVGDTLSLAVGSRMNGNKNLGQHAPYIYGKEAL 180 Query: 181 VPKAKRTYNVVGIYYLPGFEEPSAPGYTLITKADAGDTADSLNLFVTLKNPRGVHAYASS 240 V K KRTY VVGI PGFEE SAPGYTLITK D D ADS ++FVTLKNPRGV AYASS Sbjct: 181 VLKTKRTYTVVGICERPGFEEHSAPGYTLITKVDTQDKADSFSIFVTLKNPRGVQAYASS 240 Query: 241 TAGTGAYVFNDNVLRFMGLSGDNIFNTLLYSVGGILVALIMIGSIFLIYNSFNISLNERT 300 TAG+ +YVFNDNVLRFMGLS + +FNT LY+V GILVA+IM+GSIFLIYNSFNISLNERT Sbjct: 241 TAGSHSYVFNDNVLRFMGLSDNKLFNTFLYTVAGILVAIIMVGSIFLIYNSFNISLNERT 300 Query: 301 HQFGILSSVGATARQLRNSVLFEGLCXXXXXXXXXXXXXXXSIRLVISVVARNFENILYT 360 QFGILSSVGATARQLRNSVLFEG+C S+ LVI +VA NF NI+ + Sbjct: 301 SQFGILSSVGATARQLRNSVLFEGVCIGAIGIPIGVMVGIGSVGLVIPIVAGNFRNIIPS 360 Query: 361 NVPLTLXXXXXXXXXXXXXXXXXXXXXXYIPARKAASTPVMEIIRQTNEVKVESKAVKTS 420 VPLTL YIPARKAA+TPVME IRQTNEVK ESKAVKTS Sbjct: 361 TVPLTLSVSVPAIVAAAAVSLVTILISAYIPARKAANTPVMESIRQTNEVKTESKAVKTS 420 Query: 421 KLAQRIYGLEGTLALKNFKRNKKRYRXXXXXXXXXXXXXXXTSAFVTDLKQWSERAVVYT 480 KLAQRIYGLEGTLALKNFKRNKKRYR +AF T LK+ +ER+++ Sbjct: 421 KLAQRIYGLEGTLALKNFKRNKKRYRSIVLSLVLSVVLFVSGNAFGTTLKRLAERSIMDF 480 Query: 481 TFDIIMSTQDMNDSEMLPLYDKLKTADGVYESSYQALMKYSCVAKASDLSDDYWKYAGSH 540 +DI+ S Q+M+DSEM PLYDKLKTADGVY+SSYQA+ YSC KASD SD Y KYAG Sbjct: 481 DYDIVFSIQNMDDSEMFPLYDKLKTADGVYKSSYQAIFAYSCAVKASDFSDRYRKYAGYA 540 Query: 541 SPDETVNLPMEIQFLDDSAYLNIIKSLNLPEEEYTGQNAKMIAVAKMKNHMKDNREEEVA 600 +P +TV+LPM+IQF++DS YL+ IK L L EEYTG++AKMIAVAK + KD E Sbjct: 541 TPAQTVHLPMDIQFIEDSEYLSFIKKLGLSVEEYTGKDAKMIAVAKKRVVKKDGPSE--- 597 Query: 601 NISDLFKSSSMNFTIAPETNGKPKMEQERNVSIKFVNTVPPDGPSIPEDSKVKNPFIFKV 660 + D+F S SM F++APETN KPKMEQ ++++I FV+T P D P IP+ S KNP +F V Sbjct: 598 -MFDMFASRSMTFSVAPETNDKPKMEQGQSINITFVDTYPVD-PLIPKQSSEKNPCVFMV 655 Query: 661 MVPYSIKEKFETSDTHVAIKALTFRSKTPIQSTAKMEAMIKGAGIKSNYTLYNFSKVLDE 720 + PYSIKEKFET DT+ I ++F SK P Q+ AKME+MI+ AGI S YTL+N ++++ Sbjct: 656 VAPYSIKEKFETPDTNAGI-GMSFLSKNPSQAVAKMESMIQDAGITSAYTLHNVYTMVEQ 714 Query: 721 NRNMIFIANVFAYTFIIMISLITVANVFNTISTNIKLRRRELAMLRSVGMSERDFQKMMN 780 R++ F+ +VF Y F+IMISLI VANVFNTISTNI+LRRRELAMLRSVGMSER+FQKMMN Sbjct: 715 YRSITFVIDVFTYVFVIMISLIAVANVFNTISTNIRLRRRELAMLRSVGMSERNFQKMMN 774 Query: 781 FECAFYGMRALIFGLPIAAISAWLIYK--VMGGGADNIAFVFPWXXXXXXXXXXXXXXXX 838 FEC FYGMR L+ GLPIA I +WLIYK V DN FVFPW Sbjct: 775 FECVFYGMRTLLLGLPIAGIISWLIYKGFVAVERLDNFNFVFPWGSMAISVFSVLFIVFI 834 Query: 839 TMLYAISKIKRENIIDALRDDMT 861 TMLYAISKIK+ENIIDALRDDMT Sbjct: 835 TMLYAISKIKKENIIDALRDDMT 857 >B1QHX4.1 B1QHX4_CLOBO Aspartate-semialdehyde dehydrogenase EC=1.2.1.11 Length = 857 Score = 1123 bits (2904), Expect = 0.0, Method: Compositional matrix adjust. Identities = 567/863 (65%), Positives = 653/863 (75%), Gaps = 8/863 (0%) Query: 1 MNIFNKVTLQSMKKSRTRTIVTIIGVVLSAAMITGVATFGVSLLNYMANGAAQKYGGWHV 60 MNIFNKVTLQ MKKSRTRTIVT+IGV+LSAAMIT VATFG SLLN++ NG+ KYGGWHV Sbjct: 1 MNIFNKVTLQGMKKSRTRTIVTVIGVILSAAMITAVATFGTSLLNFLVNGSIVKYGGWHV 60 Query: 61 EFVNVDSSFTQERALDKGVANSATVENIGYAKLDGGKNPKKPYLFMAGFSKKAFDTLPIN 120 EF+NVDSSF QER D GVAN+A ENIGYAKLDGGK+P+KPYLF+AGFSK+AFDTLP+ Sbjct: 61 EFLNVDSSFVQERTHDNGVANTAAFENIGYAKLDGGKSPEKPYLFIAGFSKEAFDTLPLT 120 Query: 121 LMSGRLPENSGEILVPMSAEVNSGVNFAEGDTLSLAVGNRMNGNKNLGQHDPYISGKETL 180 L+SGRLP+NSGEIL+P GV F GDTLSLAVG+RMNGNKNLGQH PYI GKE L Sbjct: 121 LVSGRLPKNSGEILIPGHVAAKGGVRFRVGDTLSLAVGSRMNGNKNLGQHAPYIYGKEAL 180 Query: 181 VPKAKRTYNVVGIYYLPGFEEPSAPGYTLITKADAGDTADSLNLFVTLKNPRGVHAYASS 240 V K KRTY VVGI PGFEE SAPGYTLITK D D ADS ++FVTLKNPRGV AYASS Sbjct: 181 VLKTKRTYTVVGICERPGFEEHSAPGYTLITKVDTQDKADSFSIFVTLKNPRGVQAYASS 240 Query: 241 TAGTGAYVFNDNVLRFMGLSGDNIFNTLLYSVGGILVALIMIGSIFLIYNSFNISLNERT 300 TAG+ +YVFNDNVLRFMGLS + +FNT LY+V GILVA+IM+GSIFLIYNSFNISLNERT Sbjct: 241 TAGSHSYVFNDNVLRFMGLSDNKLFNTFLYTVAGILVAIIMVGSIFLIYNSFNISLNERT 300 Query: 301 HQFGILSSVGATARQLRNSVLFEGLCXXXXXXXXXXXXXXXSIRLVISVVARNFENILYT 360 QFGILSSVGATARQLRNSVLFEG+C S+ LVI +VA NF NI+ + Sbjct: 301 SQFGILSSVGATARQLRNSVLFEGVCIGAIGIPIGVMVGIGSVGLVIPIVAGNFRNIIPS 360 Query: 361 NVPLTLXXXXXXXXXXXXXXXXXXXXXXYIPARKAASTPVMEIIRQTNEVKVESKAVKTS 420 VPLTL YIPARKAA+TPVME IRQTNEVK ESKAVKTS Sbjct: 361 TVPLTLSVSVPAIVAAAAVSLVTILISAYIPARKAANTPVMESIRQTNEVKTESKAVKTS 420 Query: 421 KLAQRIYGLEGTLALKNFKRNKKRYRXXXXXXXXXXXXXXXTSAFVTDLKQWSERAVVYT 480 KLAQRIYGLEGTLALKNFKRNKKRYR +AF T LK+ +ER+++ Sbjct: 421 KLAQRIYGLEGTLALKNFKRNKKRYRSIVLSLVLSVVLFVSGNAFGTTLKRLAERSIMDF 480 Query: 481 TFDIIMSTQDMNDSEMLPLYDKLKTADGVYESSYQALMKYSCVAKASDLSDDYWKYAGSH 540 +DI+ S Q+M+DSEM PLYDKLKTADGVY+SSYQA+ YSC KASD SD Y KYAG Sbjct: 481 DYDIVFSIQNMDDSEMFPLYDKLKTADGVYKSSYQAIFAYSCAVKASDFSDRYRKYAGYA 540 Query: 541 SPDETVNLPMEIQFLDDSAYLNIIKSLNLPEEEYTGQNAKMIAVAKMKNHMKDNREEEVA 600 +P +TV+LPM+IQF++DS YL+ IK L L EEYTG++AKMIAVAK + KD E Sbjct: 541 TPAQTVHLPMDIQFIEDSEYLSFIKKLGLSVEEYTGKDAKMIAVAKKRVVKKDGPSE--- 597 Query: 601 NISDLFKSSSMNFTIAPETNGKPKMEQERNVSIKFVNTVPPDGPSIPEDSKVKNPFIFKV 660 + D+F S SM F++APETN KPKMEQ ++++I FV+T P D P IP+ S KNP +F V Sbjct: 598 -MFDMFASRSMTFSVAPETNDKPKMEQGQSINITFVDTYPVD-PLIPKQSSEKNPCVFMV 655 Query: 661 MVPYSIKEKFETSDTHVAIKALTFRSKTPIQSTAKMEAMIKGAGIKSNYTLYNFSKVLDE 720 + PYSIKEKFET DT+ I ++F SK P Q+ AKME+MI+ AGI S YTL+N ++++ Sbjct: 656 VAPYSIKEKFETPDTNAGI-GMSFLSKNPSQAVAKMESMIQDAGITSAYTLHNVYTMVEQ 714 Query: 721 NRNMIFIANVFAYTFIIMISLITVANVFNTISTNIKLRRRELAMLRSVGMSERDFQKMMN 780 R++ F+ +VF Y F+IMISLI VANVFNTISTNI+LRRRELAMLRSVGMSER+FQKMMN Sbjct: 715 YRSITFVIDVFTYVFVIMISLIAVANVFNTISTNIRLRRRELAMLRSVGMSERNFQKMMN 774 Query: 781 FECAFYGMRALIFGLPIAAISAWLIYK--VMGGGADNIAFVFPWXXXXXXXXXXXXXXXX 838 FEC FYGMR L+ GLPIA I +WLIYK V DN FVFPW Sbjct: 775 FECVFYGMRTLLLGLPIAGIISWLIYKGFVAVERLDNFNFVFPWGSMAISVFSVLFIVFI 834 Query: 839 TMLYAISKIKRENIIDALRDDMT 861 TMLYAISKIK+ENIIDALRDDMT Sbjct: 835 TMLYAISKIKKENIIDALRDDMT 857 >Q893B3.1 Q893B3_CLOTE ABC transporter ATP-binding protein Length = 862 Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust. Identities = 564/869 (64%), Positives = 642/869 (73%), Gaps = 15/869 (1%) Query: 1 MNIFNKVTLQSMKKSRTRTIVTIIGVVLSAAMITGVATFGVSLLNYMANGAAQKYGGWHV 60 MNIFNK+TLQ MKKSRTRTIVT+IGV+LSAAMIT VATFG SLLN++ NG+ KYG WHV Sbjct: 1 MNIFNKITLQGMKKSRTRTIVTVIGVILSAAMITAVATFGTSLLNFLVNGSIVKYGDWHV 60 Query: 61 EFVNVDSSFTQERALDKGVANSATVENIGYAKLDGGKNPKKPYLFMAGFSKKAFDTLPIN 120 EF++VDSSF QER D GVAN+ ENIGYA LDGGK+P+KPYLF+AGFS++AFDTLPI+ Sbjct: 61 EFLDVDSSFVQERTHDNGVANTVVFENIGYATLDGGKSPEKPYLFLAGFSEEAFDTLPIS 120 Query: 121 LMSGRLPENSGEILVPMSAEVNSGVNFAEGDTLSLAVGNRMNGNKNLGQHDPYISG---- 176 L+SGRLPENS EILVP GV F GDTLSLAVG R++GNKNLGQHDPY+SG Sbjct: 121 LISGRLPENSEEILVPAHVAAKGGVRFTVGDTLSLAVGRRIDGNKNLGQHDPYLSGGESG 180 Query: 177 --KETLVPKAKRTYNVVGIYYLPGFEEPSAPGYTLITKADAGDTADSLNLFVTLKNPRGV 234 KE LVPKA+RTY VVGI PGFEE SAPGYTLITKAD D A+S ++FVTLKNPRGV Sbjct: 181 DDKEVLVPKAERTYTVVGICERPGFEEHSAPGYTLITKADTADQAESFSIFVTLKNPRGV 240 Query: 235 HAYASSTAGTGAYVFNDNVLRFMGLSGDNIFNTLLYSVGGILVALIMIGSIFLIYNSFNI 294 AYASSTAG AY+FND VLRFMG S + +FN LLY+VGGILVA+IM+GSIFLIYNSFNI Sbjct: 241 QAYASSTAGARAYIFNDYVLRFMGASDNKLFNALLYAVGGILVAIIMVGSIFLIYNSFNI 300 Query: 295 SLNERTHQFGILSSVGATARQLRNSVLFEGLCXXXXXXXXXXXXXXXSIRLVISVVARNF 354 SLNERT QFGILSSVGATA QLRNSVLFEGLC SI VI +VARNF Sbjct: 301 SLNERTRQFGILSSVGATAGQLRNSVLFEGLCIGAIGIPIGVMVGIGSIGFVIPIVARNF 360 Query: 355 ENILYTNVPLTLXXXXXXXXXXXXXXXXXXXXXXYIPARKAASTPVMEIIRQTNEVKVES 414 NILY+ VPLTL YIPARKAA+TPVME IRQTNEVK ES Sbjct: 361 GNILYSTVPLTLSVSVHAIVAAVAVSLVTILISAYIPARKAANTPVMESIRQTNEVKTES 420 Query: 415 KAVKTSKLAQRIYGLEGTLALKNFKRNKKRYRXXXXXXXXXXXXXXXTSAFVTDLKQWSE 474 K VKTSKL QRIYGLEG LALKNFKRNKKRYR SAF T LK+ SE Sbjct: 421 KVVKTSKLVQRIYGLEGALALKNFKRNKKRYRSIVLSLVLSVVLFVSGSAFGTTLKRLSE 480 Query: 475 RAVVYTTFDIIMSTQDMNDSEMLPLYDKLKTADGVYESSYQALMKYSCVAKASDLSDDYW 534 R ++ +DI ++TQD++DSEM PLYDKLKTADGVYESSYQA+ YSC KASD SD Y Sbjct: 481 RLIMDFDYDIFLTTQDIDDSEMFPLYDKLKTADGVYESSYQAVFAYSCAVKASDFSDRYR 540 Query: 535 KYAGSHSPDETVNLPMEIQFLDDSAYLNIIKSLNLPEEEYTGQNAKMIAVAKMKNHMKDN 594 +Y G +PD+TV LPM+IQF++DS YL IK L+LP EEYTGQ AKMIAVAK + KD Sbjct: 541 EYVGYSAPDQTVYLPMDIQFIEDSEYLRFIKELSLPAEEYTGQGAKMIAVAKKRVDKKDG 600 Query: 595 REEEVANISDLFKSSSMNFTIAPETNGKPKMEQERNVSIKFVNTVPPDGPSIPEDSKVKN 654 E + D+F S S F++APETN KP MEQ ++++I FV+T P D P P S + Sbjct: 601 PSE----LFDMFASRSTTFSVAPETNDKPMMEQGQSINITFVDTYPVDPP--PRQSSKQR 654 Query: 655 PFIFKVMVPYSIKEKFETSDTHVAIKALTFRSKTPIQSTAKMEAMIKGAGIKSNYTLYNF 714 ++F V+ PYS+KEKFET DTH A L F SK P QS A MEAMI+ AGI S YTLYN Sbjct: 655 SYVFMVVAPYSLKEKFETPDTH-ADMGLAFLSKNPSQSVADMEAMIQDAGIMSAYTLYNV 713 Query: 715 SKVLDENRNMIFIANVFAYTFIIMISLITVANVFNTISTNIKLRRRELAMLRSVGMSERD 774 ++++ R++ F+ +VF Y F+IMISLI VANVFNTISTNI+LRRRELAMLRSVGMS+RD Sbjct: 714 YAIVEQYRSLTFVIDVFTYVFVIMISLIAVANVFNTISTNIRLRRRELAMLRSVGMSDRD 773 Query: 775 FQKMMNFECAFYGMRALIFGLPIAAISAWLIYK--VMGGGADNIAFVFPWXXXXXXXXXX 832 F KMMNFEC FYGMR L+FGLPIAAI +WLIYK V DN FVFPW Sbjct: 774 FNKMMNFECVFYGMRTLLFGLPIAAIISWLIYKGLVAVERMDNFDFVFPWGSMIISVFSV 833 Query: 833 XXXXXXTMLYAISKIKRENIIDALRDDMT 861 TMLYAISKIK+ENIIDALRDDMT Sbjct: 834 LFIVFITMLYAISKIKKENIIDALRDDMT 862 >Q181I5.1 Q181I5_CLOD6 Putative ABC transporter, permease protein Length = 848 Score = 1073 bits (2776), Expect = 0.0, Method: Compositional matrix adjust. Identities = 545/860 (63%), Positives = 631/860 (73%), Gaps = 13/860 (1%) Query: 1 MNIFNKVTLQSMKKSRTRTIVTIIGVVLSAAMITGVATFGVSLLNYMANGAAQKYGGWHV 60 MNIFNKV LQ +KK+RTRT+VTIIGVVLSAAMIT V TFGVSL+NYM NGA KYG WHV Sbjct: 1 MNIFNKVALQGLKKNRTRTLVTIIGVVLSAAMITAVTTFGVSLMNYMTNGAIIKYGDWHV 60 Query: 61 EFVNVDSSFTQERALDKGVANSATVENIGYAKLDGGKNPKKPYLFMAGFSKKAFDTLPIN 120 +F++VDSSF QE+ ++ VAN+AT ENIGYA L+G +NP KPYLF+AGFSK+AFDTLPI Sbjct: 61 QFLDVDSSFVQEQRVNDEVANTATFENIGYATLEGNRNPDKPYLFIAGFSKEAFDTLPIT 120 Query: 121 LMSGRLPENSGEILVPMSAEVNSGVNFAEGDTLSLAVGNRMNGNKNLGQHDPYISGKETL 180 L+SGRLPENS EILV + GV FA GDT+SL VG RM+ N+ LGQ DPY +G E Sbjct: 121 LISGRLPENSREILVSSKVATDGGVKFAVGDTISLDVGKRMSENEKLGQSDPYTAGSEVF 180 Query: 181 VPKAKRTYNVVGIYYLPGFEEPSAPGYTLITKADAGDTADSLNLFVTLKNPRGVHAYASS 240 VP+ K+TY VVGI P FEE SAPGYTLITK D DSL+LFVTLKNP + +Y SS Sbjct: 181 VPQDKKTYTVVGICRKPVFEESSAPGYTLITKEDKQVKTDSLSLFVTLKNPHQIRSYTSS 240 Query: 241 TAGTGAYVFNDNVLRFMGLSGDNIFNTLLYSVGGILVALIMIGSIFLIYNSFNISLNERT 300 T A +FNDNVLRF+G+S +N+FN LYSVGGI++A+IM+GSIFLIYNSFN+SLNERT Sbjct: 241 TKD-HASIFNDNVLRFIGVSDNNLFNMFLYSVGGIVLAIIMLGSIFLIYNSFNMSLNERT 299 Query: 301 HQFGILSSVGATARQLRNSVLFEGLCXXXXXXXXXXXXXXXSIRLVISVVARNFENILYT 360 HQFGILSSVGATA+QLRNSVLFEG+C SI LVISV+A+NF NILY Sbjct: 300 HQFGILSSVGATAKQLRNSVLFEGICIGAIGIPIGVAIGIVSIGLVISVIAKNFANILYV 359 Query: 361 NVPLTLXXXXXXXXXXXXXXXXXXXXXXYIPARKAASTPVMEIIRQTNEVKVESKAVKTS 420 NVPLTL YIPARKAA+TPVME IRQTNEVK+ESK+VKTS Sbjct: 360 NVPLTLTLSIPAIIVAAVVSMVTILISAYIPARKAANTPVMECIRQTNEVKIESKSVKTS 419 Query: 421 KLAQRIYGLEGTLALKNFKRNKKRYRXXXXXXXXXXXXXXXTSAFVTDLKQWSERAVVYT 480 KL QR+YGLEG LA+KNFKRNKKRYR TSA V DLKQ S + T Sbjct: 420 KLTQRVYGLEGVLAMKNFKRNKKRYRSIVLSLVLSIVLFISTSALVADLKQMSNQRSEVT 479 Query: 481 TFDIIMSTQDMNDSEMLPLYDKLKTADGVYESSYQALMKYSCVAKASDLSDDYWKYAGSH 540 DII STQ M D+EML LYDKLKTA+GVYE YQ LM YSCVAK S+L+DDY Y GSH Sbjct: 480 DQDIIFSTQGMKDNEMLKLYDKLKTANGVYEGLYQKLMTYSCVAKVSELTDDYLNYEGSH 539 Query: 541 SPDETVNLPMEIQFLDDSAYLNIIKSLNLPEEEYTGQNAKMIAVAKMKNHMKDNREEEVA 600 S E + LP+++QFLDD YLNIIKSL LP EEYTGQNAK+IAV+ + KDN Sbjct: 540 SMSEMLELPVDMQFLDDRTYLNIIKSLGLPAEEYTGQNAKLIAVSMVT---KDN------ 590 Query: 601 NISDLFKSSSMNFTIAPETNGKPKMEQERNVSIKFVNTVPPDGPSIPEDSKVKNPFIFKV 660 NI D+F SSSMN ++ PETNGK ++ + +NV+I FV VPPD P S VK F+V Sbjct: 591 NIIDIFNSSSMNVSLTPETNGKLEIPERQNVNISFVKVVPPDSPPGIRSSDVKKAS-FRV 649 Query: 661 MVPYSIKEKFETSDTHVAIKALTFRSKTPIQSTAKMEAMIKGAGIKSNYTLYNFSKVLDE 720 + PYS K+KFE I++L+F+SK P QS A+ME +I+ G+ + Y LYN ++DE Sbjct: 650 LAPYSAKDKFEIPGVSTGIESLSFQSKNPTQSVAEMEQIIESEGVTNEYNLYNMYGMMDE 709 Query: 721 NRNMIFIANVFAYTFIIMISLITVANVFNTISTNIKLRRRELAMLRSVGMSERDFQKMMN 780 NRN IFIANVFAYTFIIMISLI++ANVFNTISTNIKLRRRELAMLRSVGMSE DFQKMMN Sbjct: 710 NRNYIFIANVFAYTFIIMISLISIANVFNTISTNIKLRRRELAMLRSVGMSEHDFQKMMN 769 Query: 781 FECAFYGMRALIFGLPIAAISAWLIYKVMGGGADNIAFVFPWXXXXXXXXXXXXXXXXTM 840 FECAFYGMRAL FGLPIA IS+WLI+KVM D+I FV PW TM Sbjct: 770 FECAFYGMRALFFGLPIAVISSWLIHKVM--VTDDIDFVIPWFSIGISIFSVLFIVFITM 827 Query: 841 LYAISKIKRENIIDALRDDM 860 LY I+KIK+ENIIDALRDDM Sbjct: 828 LYTINKIKKENIIDALRDDM 847 >Q97LN0.1 Q97LN0_CLOAB Predicted permease, domain duplication Length = 863 Score = 1014 bits (2623), Expect = 0.0, Method: Compositional matrix adjust. Identities = 528/869 (60%), Positives = 616/869 (70%), Gaps = 16/869 (1%) Query: 1 MNIFNKVTLQSMKKSRTRTIVTIIGVVLSAAMITGVATFGVSLLNYMANGAAQKYGGWHV 60 MN+FNKV LQ MKKSRTRTIVT+IGV+LS +ITGV TFG+SL+NY+A G AQKYGGWHV Sbjct: 1 MNVFNKVALQGMKKSRTRTIVTVIGVILSVTLITGVTTFGISLMNYLAKGEAQKYGGWHV 60 Query: 61 EFVNVDSSFTQERALDKGVANSATVENIGYAKLDGGKNPKKPYLFMAGFSKKAFDTLP-I 119 +F NV+SSF ++A + VA+ AT +NIGYAKL G K KPYLF+AG+SKK F+ LP I Sbjct: 61 KFENVNSSFASKQASNDKVASVATFKNIGYAKLKGVKTTNKPYLFIAGYSKKNFNALPPI 120 Query: 120 NLMSGRLPENSGEILVPMSAEVNSGVNFAEGDTLSLAVGNRMNGNKNLGQHDPYISGKET 179 ++ GR+P+NS EI+VP GV GD ++ VG+RM NK+LGQHDPYISGKET Sbjct: 121 LMVMGRMPQNSREIVVPGKVMTKGGVKVQLGDKFTIDVGSRMKVNKSLGQHDPYISGKET 180 Query: 180 LVPKAKRTYNVVGIYYLPGFEEPSAPGYTLITKADAGDTADSLNLFVTLKNPRGVHAYAS 239 LVPK KRTY VVGI +P F+E SAPGYT IT ADA DT D L+LFVTLKNPR VH YA Sbjct: 181 LVPKVKRTYTVVGISQMPTFDEDSAPGYTAITTADAADTMDDLSLFVTLKNPREVHTYAK 240 Query: 240 STAGTGAYVFNDNVLRFMGLS---GDNIFNTLLYSVGGILVALIMIGSIFLIYNSFNISL 296 STA AY N+ VLRFM LS GD +FN LYSVGGI+V +IMIGSIFLIYNSFNISL Sbjct: 241 STAEGHAYTLNNEVLRFMALSNDPGDKVFNAFLYSVGGIVVVIIMIGSIFLIYNSFNISL 300 Query: 297 NERTHQFGILSSVGATARQLRNSVLFEGLCXXXXXXXXXXXXXXXSIRLVISVVARNFEN 356 NERTHQFGILSSVGATA+QLR SVLFEG+C S +LV+ VVA+ F N Sbjct: 301 NERTHQFGILSSVGATAKQLRRSVLFEGICIGAIGIPIGVLVGIASTKLVMVVVAKQFSN 360 Query: 357 ILYTNVPLTLXXXXXXXXXXXXXXXXXXXXXXYIPARKAASTPVMEIIRQTNEVKVESKA 416 I + VP T+ IPARKAA+ PVME IRQTNEVK+E+K Sbjct: 361 IFFVGVPFTVMVSVPAILAAVVISMITILISADIPARKAANMPVMECIRQTNEVKLEAKE 420 Query: 417 VKTSKLAQRIYGLEGTLALKNFKRNKKRYRXXXXXXXXXXXXXXXTSAFVTDLKQWSERA 476 VKTSKLAQRIYG EG LALKNFKRNKKRYR TSA V DLKQ + A Sbjct: 421 VKTSKLAQRIYGFEGVLALKNFKRNKKRYRSIVLSLVLSVVLFISTSAMVADLKQTTAGA 480 Query: 477 VVYTTFDIIMSTQDMNDSEMLPLYDKLKTADGVYESSYQALMKYSCVAKASDLSDDYWKY 536 +DI + DM DSEML LY+KLKT +GVYESSYQ +M YSC K SD SD Y K Sbjct: 481 KEINGYDIGFGSDDMKDSEMLQLYNKLKTTNGVYESSYQVVMNYSCAVKGSDFSDAYKKS 540 Query: 537 AGSHSPDETVNLPMEIQFLDDSAYLNIIKSLNLPEEEYTGQNAKMIAVAKMKNHMKDNRE 596 SHS D+TVNL IQFLDDS YLNI+K L LP++EY G NAK+I+VAK+ + DN + Sbjct: 541 VSSHSLDKTVNLSTIIQFLDDSTYLNIVKRLGLPKKEYIGPNAKLISVAKVDSD-HDN-Q 598 Query: 597 EEVANISDLFKSSSMNFTIAPETNGKPKMEQERNVSIKFVNT-VPPDGPSIPEDSKV--K 653 + V + D+FKSSSMNFTIAPE NGKP++ Q RNVSI FV+T V PD IP +V K Sbjct: 599 KNVHQLPDMFKSSSMNFTIAPEINGKPEIRQGRNVSITFVSTMVMPD---IPPSVRVSLK 655 Query: 654 NPFIFKVMVPYSIKEKFETSDTHVAI--KALTFRSKTPIQSTAKMEAMIKGAGIKSNYTL 711 P ++ PYS+KEKF TS+ I K +TF SK P QS AKME IKGA IK YTL Sbjct: 656 KPSKLSLIAPYSLKEKFNTSNISADINAKGMTFLSKNPSQSAAKMEEAIKGAKIKDIYTL 715 Query: 712 YNFSKVLDENRNMIFIANVFAYTFIIMISLITVANVFNTISTNIKLRRRELAMLRSVGMS 771 N K+ +EN+N IFI +VF+YTFIIMISLI VANVFNTISTNIKLRRRELAMLRSVGMS Sbjct: 716 INSKKIFEENKNEIFIVDVFSYTFIIMISLIAVANVFNTISTNIKLRRRELAMLRSVGMS 775 Query: 772 ERDFQKMMNFECAFYGMRALIFGLPIAAISAWLIYKVMGGGADNIAFVFPWXXXXXXXXX 831 +RDF+KMMNFEC FYGM+AL+ GLP++ I +WL++KVM G D+ FV PW Sbjct: 776 DRDFKKMMNFECVFYGMKALLLGLPLSIIFSWLVHKVMSG--DSTHFVLPWSSIGISVFG 833 Query: 832 XXXXXXXTMLYAISKIKRENIIDALRDDM 860 TM+Y+ISKIK+ENIIDALRDDM Sbjct: 834 VLFIVFITMMYSISKIKKENIIDALRDDM 862 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.133 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,362,201,011 Number of extensions: 173151169 Number of successful extensions: 457996 Number of sequences better than 1.0e-05: 112 Number of HSP's gapped: 457836 Number of HSP's successfully gapped: 161 Length of query: 861 Length of database: 3,060,696,203 Length adjustment: 145 Effective length of query: 716 Effective length of database: 1,694,649,028 Effective search space: 1213368704048 Effective search space used: 1213368704048 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 136 (57.0 bits)