BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0535.0019.p (507 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A9KRH9.1 A9KRH9_CLOPH ABC transporter related 630 e-178 Q24Y42.1 Q24Y42_DESHY Putative uncharacterized protein 583 e-164 B8FTF5.1 B8FTF5_DESHD ABC transporter related 583 e-164 Q24QU1.1 Q24QU1_DESHY Putative uncharacterized protein 579 e-163 Q2BE35.1 Q2BE35_9BACI Probable permease protein of ABC transport... 576 e-162 >A9KRH9.1 A9KRH9_CLOPH ABC transporter related Length = 585 Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust. Identities = 306/487 (62%), Positives = 370/487 (75%), Gaps = 2/487 (0%) Query: 1 MVKILKYLNPKEWALFGVSFLFIVAQVWLDLELPDYMSEITRLVQTPGSEMSDIIATGGW 60 M+K+ K L KEW G+SF+FI+AQVWLDL+LPDYMSEIT LVQT GS M++I+ GG Sbjct: 1 MIKLFKNLTKKEWLFVGISFVFIIAQVWLDLKLPDYMSEITMLVQTEGSTMTEILTAGGK 60 Query: 61 MLLCALGSLATSXXXXXXXXXXXXNFSSRLRSKLFDKVQSFSMEEINNFSTASLITRSTN 120 ML CALGSL + NF +RLR LFDKVQSF+MEEIN FST+SLITRSTN Sbjct: 61 MLTCALGSLVGAVIVAVLAAKVASNFGARLRGHLFDKVQSFTMEEINRFSTSSLITRSTN 120 Query: 121 DITQVQMLIVIGLQLLVKAPILAVWALLKITGKSWEWSLTTXXXXXXXXXXXXXXXXXXX 180 DITQVQML+V+GLQ ++KAPILAVWA++KI GKSW+W+LTT Sbjct: 121 DITQVQMLVVMGLQAMIKAPILAVWAIMKINGKSWQWTLTTTLAVLVLLVVVGCCVILAM 180 Query: 181 PKFQKLQQLTDNLNRVSRENLTGLRIIRAYNAEGYQENKFSEANNVLTRTNLFANNVLAV 240 PKF+KLQ+LTD+LNRV+RENLTGLR++RAYNAE YQ KF +AN LT +NLFAN V+A+ Sbjct: 181 PKFKKLQKLTDDLNRVTRENLTGLRVVRAYNAEEYQGRKFEKANTELTGSNLFANRVMAM 240 Query: 241 LMPSITLIMSGLSLAIYWVGASLIQSADMGAKMGLFSDMIVFSSYAIQVVMAXXXXXXXX 300 ++PSI L+MSGLSLAIYWVGA LIQ A M KM LFSDMIVFSSYA+QVVMA Sbjct: 241 MLPSIQLVMSGLSLAIYWVGAILIQEASMMDKMTLFSDMIVFSSYAMQVVMAFMMLIMIF 300 Query: 301 XXXPRAHVSAKRINEVLDTKPSLMNGSLTASSSKLAGEVEFRKVSFKYPDADDYVLKDIS 360 PRA VSAKRI EVLDTKP++++G + +S ++ GEVEF+ VSFKYPDA+DYV++++S Sbjct: 301 IMLPRASVSAKRILEVLDTKPTIVDGQIMSSKTRCKGEVEFKNVSFKYPDAEDYVIRNVS 360 Query: 361 FTAKTGETVAFIGSTGCGKSTVVNLIPRFYDATXXXXXXXXXXXXQYEESALRNKMGYVS 420 FTAK GETVAFIGSTGCGKSTVVNLIPRFYD T +Y + ALRNK+GYVS Sbjct: 361 FTAKKGETVAFIGSTGCGKSTVVNLIPRFYDVTEGEVLVDGINVKEYSQYALRNKIGYVS 420 Query: 421 QKAVLFGGTVTSNIAFGDNGSDA--SAEVVDAVYISQASDFVEKMEGSYDAHIAQGGTNL 478 QKA LFGGT+ SN+AFGDNG D + ++++AV +QA++FVE E SYD+ +AQGG NL Sbjct: 421 QKATLFGGTIKSNVAFGDNGKDGYLATDIIEAVSTAQAAEFVEAKEESYDSFVAQGGANL 480 Query: 479 SGGQKQR 485 SGGQKQR Sbjct: 481 SGGQKQR 487 >Q24Y42.1 Q24Y42_DESHY Putative uncharacterized protein Length = 586 Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust. Identities = 288/487 (59%), Positives = 354/487 (72%), Gaps = 2/487 (0%) Query: 1 MVKILKYLNPKEWALFGVSFLFIVAQVWLDLELPDYMSEITRLVQTPGSEMSDIIATGGW 60 MV+I KYL +EW + G+S +FIVAQVWLDL+LPDYM+EIT L QTP S +SDI GG+ Sbjct: 1 MVRIFKYLKAEEWLMAGISLIFIVAQVWLDLKLPDYMAEITTLTQTPNSAISDIWLNGGY 60 Query: 61 MLLCALGSLATSXXXXXXXXXXXXNFSSRLRSKLFDKVQSFSMEEINNFSTASLITRSTN 120 MLLCALGSLA + +FS RLRS LF+KV+SFSMEEIN FST+SLITRSTN Sbjct: 61 MLLCALGSLAAAVVVGFFAAKIAASFSQRLRSLLFNKVESFSMEEINRFSTSSLITRSTN 120 Query: 121 DITQVQMLIVIGLQLLVKAPILAVWALLKITGKSWEWSLTTXXXXXXXXXXXXXXXXXXX 180 DITQ+QML+V+GLQL++KAPI AVWA+ KI+GK +EW++ T Sbjct: 121 DITQIQMLVVMGLQLVIKAPITAVWAITKISGKGFEWTMVTGVAVLIMIIMVTFLLIVAL 180 Query: 181 PKFQKLQQLTDNLNRVSRENLTGLRIIRAYNAEGYQENKFSEANNVLTRTNLFANNVLAV 240 PKF+K+Q LTDN+ RV+RENLTGLR++RAYNAE YQE KF AN LT T +F N +AV Sbjct: 181 PKFKKMQTLTDNITRVTRENLTGLRVVRAYNAENYQEEKFETANEELTSTQMFTNRAMAV 240 Query: 241 LMPSITLIMSGLSLAIYWVGASLIQSADMGAKMGLFSDMIVFSSYAIQVVMAXXXXXXXX 300 +MP ++++MSGLSLAIYW+GA LI +A K+GLFS+M+VFSSYA+QV+M+ Sbjct: 241 MMPVMSMLMSGLSLAIYWIGAYLIDAAGALDKLGLFSNMVVFSSYAMQVIMSFMMLVMIF 300 Query: 301 XXXPRAHVSAKRINEVLDTKPSLMNGSLTASSSKLAGEVEFRKVSFKYPDADDYVLKDIS 360 PRA VSAKRINEVLDT+P +++G+ T L GEV F+ VSF+YPDA + VL+DIS Sbjct: 301 IMLPRASVSAKRINEVLDTEPRILDGTKTEGQPGLRGEVVFKSVSFQYPDAAEPVLEDIS 360 Query: 361 FTAKTGETVAFIGSTGCGKSTVVNLIPRFYDATXXXXXXXXXXXXQYEESALRNKMGYVS 420 FTA GETVAFIGSTG GKST+VNL RF+DAT +Y+ AL NK+GYV Sbjct: 361 FTASPGETVAFIGSTGSGKSTLVNLALRFFDATQGEILIDGVNVQEYKLEALFNKIGYVP 420 Query: 421 QKAVLFGGTVTSNIAFGDNGSDASA--EVVDAVYISQASDFVEKMEGSYDAHIAQGGTNL 478 QKAVLF GTV SN+A+GDNG + EV AV I+Q +DFVEKM+G Y A IAQGG N+ Sbjct: 421 QKAVLFKGTVESNVAYGDNGGEGYPLDEVKKAVQIAQGADFVEKMDGQYQAAIAQGGANV 480 Query: 479 SGGQKQR 485 SGGQKQR Sbjct: 481 SGGQKQR 487 >B8FTF5.1 B8FTF5_DESHD ABC transporter related Length = 586 Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust. Identities = 288/487 (59%), Positives = 354/487 (72%), Gaps = 2/487 (0%) Query: 1 MVKILKYLNPKEWALFGVSFLFIVAQVWLDLELPDYMSEITRLVQTPGSEMSDIIATGGW 60 MV+I KYL +EW + G+S +FIVAQVWLDL+LPDYM+EIT L QTP S +SDI GG+ Sbjct: 1 MVRIFKYLKAEEWLMAGISLIFIVAQVWLDLKLPDYMAEITTLTQTPNSAISDIWLNGGY 60 Query: 61 MLLCALGSLATSXXXXXXXXXXXXNFSSRLRSKLFDKVQSFSMEEINNFSTASLITRSTN 120 MLLCALGSLA + +FS RLRS LF+KV+SFSMEEIN FST+SLITRSTN Sbjct: 61 MLLCALGSLAAAVVVGFFAAKIAASFSQRLRSLLFNKVESFSMEEINRFSTSSLITRSTN 120 Query: 121 DITQVQMLIVIGLQLLVKAPILAVWALLKITGKSWEWSLTTXXXXXXXXXXXXXXXXXXX 180 DITQ+QML+V+GLQL++KAPI AVWA+ KI+GK +EW++ T Sbjct: 121 DITQIQMLVVMGLQLVIKAPITAVWAITKISGKGFEWTMVTGVAVLIMIIMVTFLLIVAL 180 Query: 181 PKFQKLQQLTDNLNRVSRENLTGLRIIRAYNAEGYQENKFSEANNVLTRTNLFANNVLAV 240 PKF+K+Q LTDN+ RV+RENLTGLR++RAYNAE YQE KF AN LT T +F N +AV Sbjct: 181 PKFKKMQTLTDNITRVTRENLTGLRVVRAYNAENYQEEKFETANEELTSTQMFTNRAMAV 240 Query: 241 LMPSITLIMSGLSLAIYWVGASLIQSADMGAKMGLFSDMIVFSSYAIQVVMAXXXXXXXX 300 +MP ++++MSGLSLAIYW+GA LI +A K+GLFS+M+VFSSYA+QV+M+ Sbjct: 241 MMPVMSMLMSGLSLAIYWIGAYLIDAAGALDKLGLFSNMVVFSSYAMQVIMSFMMLVMIF 300 Query: 301 XXXPRAHVSAKRINEVLDTKPSLMNGSLTASSSKLAGEVEFRKVSFKYPDADDYVLKDIS 360 PRA VSAKRINEVLDT+P +++G+ T L GEV F+ VSF+YPDA + VL+DIS Sbjct: 301 IMLPRASVSAKRINEVLDTEPRILDGTKTEGQPGLRGEVVFKSVSFQYPDAAEPVLEDIS 360 Query: 361 FTAKTGETVAFIGSTGCGKSTVVNLIPRFYDATXXXXXXXXXXXXQYEESALRNKMGYVS 420 FTA GETVAFIGSTG GKST+VNL RF+DAT +Y+ AL NK+GYV Sbjct: 361 FTASPGETVAFIGSTGSGKSTLVNLALRFFDATQGEILIDGVNVQEYKLEALFNKIGYVP 420 Query: 421 QKAVLFGGTVTSNIAFGDNGSDASA--EVVDAVYISQASDFVEKMEGSYDAHIAQGGTNL 478 QKAVLF GTV SN+A+GDNG + EV AV I+Q +DFVEKM+G Y A IAQGG N+ Sbjct: 421 QKAVLFKGTVESNVAYGDNGGEGYPLDEVKKAVQIAQGADFVEKMDGQYQAAIAQGGANV 480 Query: 479 SGGQKQR 485 SGGQKQR Sbjct: 481 SGGQKQR 487 >Q24QU1.1 Q24QU1_DESHY Putative uncharacterized protein Length = 585 Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust. Identities = 286/486 (58%), Positives = 350/486 (72%), Gaps = 1/486 (0%) Query: 1 MVKILKYLNPKEWALFGVSFLFIVAQVWLDLELPDYMSEITRLVQTPGSEMSDIIATGGW 60 M++I K L KEW L S +FIVAQVWLDL+LPDYMSEITRL QTPGS +SDI A GG+ Sbjct: 1 MLEIFKRLKAKEWLLAAFSLVFIVAQVWLDLKLPDYMSEITRLTQTPGSAISDIWAAGGY 60 Query: 61 MLLCALGSLATSXXXXXXXXXXXXNFSSRLRSKLFDKVQSFSMEEINNFSTASLITRSTN 120 MLLCALGSLA + FS LRS +F KV S SMEEI FSTASLITRSTN Sbjct: 61 MLLCALGSLAAAIIVGFFAARIAATFSKELRSDMFAKVDSLSMEEIGRFSTASLITRSTN 120 Query: 121 DITQVQMLIVIGLQLLVKAPILAVWALLKITGKSWEWSLTTXXXXXXXXXXXXXXXXXXX 180 DITQVQMLI +GLQL++KAPI+AVWA+ KI+GK EW+ T Sbjct: 121 DITQVQMLITMGLQLVIKAPIMAVWAVTKISGKGLEWTAATGVALIVMIVVIAVIMVFVF 180 Query: 181 PKFQKLQQLTDNLNRVSRENLTGLRIIRAYNAEGYQENKFSEANNVLTRTNLFANNVLAV 240 PKF+K+Q LTDNLNRV+RENLTGLR +RAYNAE YQE KF++AN+ LT T LF + +A+ Sbjct: 181 PKFKKMQVLTDNLNRVTRENLTGLRSVRAYNAEDYQEEKFAKANDELTSTQLFTSRAMAL 240 Query: 241 LMPSITLIMSGLSLAIYWVGASLIQSADMGAKMGLFSDMIVFSSYAIQVVMAXXXXXXXX 300 +MP I+ +M+GL+LAIYW+GA LI A K+ LFS+M+VFSSYA+QV+M+ Sbjct: 241 MMPLISTVMNGLTLAIYWIGALLIGQAGAADKLTLFSNMVVFSSYAMQVIMSFMMIAMVF 300 Query: 301 XXXPRAHVSAKRINEVLDTKPSLMNGSLTASSSKLAGEVEFRKVSFKYPDADDYVLKDIS 360 PRA VSAKRINEVLDT+PS+ G++T + GEV F++V F YP A DYVL D+S Sbjct: 301 IMVPRASVSAKRINEVLDTEPSIEEGTVTQGKPGVEGEVVFKQVGFMYPGASDYVLHDVS 360 Query: 361 FTAKTGETVAFIGSTGCGKSTVVNLIPRFYDATXXXXXXXXXXXXQYEESALRNKMGYVS 420 FTA+ GETVAFIGSTG GKST++NLIPRFYDAT +Y + AL NK+GYV Sbjct: 361 FTARKGETVAFIGSTGSGKSTLINLIPRFYDATEGEIVIDGVNIKEYNKEALHNKIGYVP 420 Query: 421 QKAVLFGGTVTSNIAFGDNGSDASAE-VVDAVYISQASDFVEKMEGSYDAHIAQGGTNLS 479 QKAV+F GTV SN+ FGDNG + +AE + A+ I+Q ++FVE+M+G Y+A IAQGGTN+S Sbjct: 421 QKAVMFKGTVDSNVNFGDNGLETTAEDIKQAISIAQGTEFVEQMDGQYEAAIAQGGTNVS 480 Query: 480 GGQKQR 485 GGQKQR Sbjct: 481 GGQKQR 486 >Q2BE35.1 Q2BE35_9BACI Probable permease protein of ABC transporter system Length = 585 Score = 576 bits (1484), Expect = e-162, Method: Compositional matrix adjust. Identities = 277/485 (57%), Positives = 347/485 (71%) Query: 1 MVKILKYLNPKEWALFGVSFLFIVAQVWLDLELPDYMSEITRLVQTPGSEMSDIIATGGW 60 M+ + K+ K+W L S +FI+ QVWLDL+LP+YM EIT LVQT GS M D++ G + Sbjct: 1 MLAMFKHFKGKDWLLVLCSLIFIIVQVWLDLKLPEYMHEITMLVQTEGSSMGDVLIQGAY 60 Query: 61 MLLCALGSLATSXXXXXXXXXXXXNFSSRLRSKLFDKVQSFSMEEINNFSTASLITRSTN 120 MLLCA+GS+A + F+ RLR +F+K SFSMEEIN FST SLITRSTN Sbjct: 61 MLLCAIGSMAAAMIVGFFAAQVAAGFAVRLRGMVFEKTMSFSMEEINGFSTPSLITRSTN 120 Query: 121 DITQVQMLIVIGLQLLVKAPILAVWALLKITGKSWEWSLTTXXXXXXXXXXXXXXXXXXX 180 DITQ+Q+LI +GLQ +VKAPILAVWA+LKI GKSW+W+ T Sbjct: 121 DITQIQLLIAVGLQAIVKAPILAVWAILKIMGKSWQWTAATGIAVAVLMVMLAVIIVIAL 180 Query: 181 PKFQKLQQLTDNLNRVSRENLTGLRIIRAYNAEGYQENKFSEANNVLTRTNLFANNVLAV 240 PKF+ +Q LTDNLNRV+RENLTG+R++RAYNAE YQE+KF +AN+ LTRTNLF +A+ Sbjct: 181 PKFKVIQTLTDNLNRVTRENLTGIRVVRAYNAEEYQEDKFEKANSELTRTNLFTGRTMAI 240 Query: 241 LMPSITLIMSGLSLAIYWVGASLIQSADMGAKMGLFSDMIVFSSYAIQVVMAXXXXXXXX 300 +MP +TLIMSG++LAIYW+GA +I +A K+ LFSDM+VFSSY++QV+MA Sbjct: 241 MMPVMTLIMSGINLAIYWIGAFIINNAATPDKLTLFSDMVVFSSYSMQVIMAFMMLSIIF 300 Query: 301 XXXPRAHVSAKRINEVLDTKPSLMNGSLTASSSKLAGEVEFRKVSFKYPDADDYVLKDIS 360 PRA VSAKRINEVL T +++G+L + SK AGE+EFR VSFKYPDA DY+LK+IS Sbjct: 301 VMLPRATVSAKRINEVLQTDSKILDGTLKGNDSKAAGEIEFRNVSFKYPDAADYILKNIS 360 Query: 361 FTAKTGETVAFIGSTGCGKSTVVNLIPRFYDATXXXXXXXXXXXXQYEESALRNKMGYVS 420 FTA GETVAFIGSTG GKST++NLIPRFYDAT +Y + LRNK+GYVS Sbjct: 361 FTAHKGETVAFIGSTGSGKSTLLNLIPRFYDATEGEVLVDGINVKEYRQEDLRNKLGYVS 420 Query: 421 QKAVLFGGTVTSNIAFGDNGSDASAEVVDAVYISQASDFVEKMEGSYDAHIAQGGTNLSG 480 QKAVLF GTV+ NIA+G G++ ++ A I+QAS+FVEK+ Y I+QGGTNLSG Sbjct: 421 QKAVLFSGTVSENIAYGTGGTEPGEKIERAAEIAQASEFVEKLGDQYQGVISQGGTNLSG 480 Query: 481 GQKQR 485 GQKQR Sbjct: 481 GQKQR 485 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.132 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,359,330,553 Number of extensions: 79721036 Number of successful extensions: 386810 Number of sequences better than 1.0e-05: 14829 Number of HSP's gapped: 363125 Number of HSP's successfully gapped: 15765 Length of query: 507 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 367 Effective length of database: 1,741,754,103 Effective search space: 639223755801 Effective search space used: 639223755801 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 133 (55.8 bits)