BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0535.0009.p
         (215 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C0ZEU8.1 C0ZEU8_BREBN Putative uncharacterized protein                246   8e-64
A4SDT2.1 A4SDT2_PROVI Putative uncharacterized protein                128   3e-28

>C0ZEU8.1 C0ZEU8_BREBN Putative uncharacterized protein
          Length = 277

 Score =  246 bits (629), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 112/181 (61%), Positives = 143/181 (79%)

Query: 15  NSGPAIDVLIPAIEKDLATLPHVIDSLRRYVRHPISNIYIVSPNSRKIRSLCTRKSCIFV 74
           NS   IDVLIPAIEKDL TLP+VIDS+R+ V+HP+  I +VSP S++I++LC RK+C F+
Sbjct: 10  NSSIKIDVLIPAIEKDLGTLPYVIDSIRKQVKHPVGKIMVVSPPSKRIQALCRRKNCTFI 69

Query: 75  DETRVLPFTKKDIRYSSARWNRSGWLYQQLLKMNGDHVCRESFFLVIDADTVLIRPHRFR 134
           +E RVLP TKKDI Y + R NRSGWL QQLLK+ G ++ ++ ++LVIDADT+LIRPH F 
Sbjct: 70  NERRVLPITKKDIHYQTKRTNRSGWLLQQLLKLAGGNLTKQRYYLVIDADTILIRPHVFL 129

Query: 135 SGNSSIFYCRSWSQPEYFRTYRKLMGTRPPAPRSFVTHYMLFEKAKLAGLKRKIEXXXXP 194
           +   ++FYCR+WS+PEYFRTYRKLMG +P A RSFV HYMLF+K+KL+ LK KIE     
Sbjct: 130 ANGKTVFYCRNWSRPEYFRTYRKLMGAKPTASRSFVAHYMLFDKSKLSRLKSKIEARHKT 189

Query: 195 R 195
           R
Sbjct: 190 R 190


>A4SDT2.1 A4SDT2_PROVI Putative uncharacterized protein
          Length = 300

 Score =  128 bits (321), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 95/170 (55%), Gaps = 1/170 (0%)

Query: 20  IDVLIPAIEKDLATLPHVIDSLRRYVRHPISNIYIVSPNSRKIRSLCTRKSCIFVDETRV 79
           +DV+IP + KD   L HVI SL+ +++H ++ +Y+V+P    +   C RK  +F+DE  V
Sbjct: 52  VDVVIPTVSKDFIMLDHVIRSLK-HIKHNVNKVYVVAPRDVLVEKYCLRKKIVFIDENTV 110

Query: 80  LPFTKKDIRYSSARWNRSGWLYQQLLKMNGDHVCRESFFLVIDADTVLIRPHRFRSGNSS 139
           L F KK I YS    +RSGWL+QQLLK++GD       F+V+D+DTV +    F+     
Sbjct: 111 LGFDKKHITYSVGGVDRSGWLFQQLLKLSGDKFVEMQNFIVLDSDTVYVNDICFKKKCRF 170

Query: 140 IFYCRSWSQPEYFRTYRKLMGTRPPAPRSFVTHYMLFEKAKLAGLKRKIE 189
           +FY        Y+  Y  + G  P A  S V H M+F    L  +K ++E
Sbjct: 171 VFYGSDEFHKPYYDAYEYMFGYPPVARVSLVAHMMIFNSDYLKEMKDELE 220


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.325    0.138    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,260,436,344
Number of extensions: 48225192
Number of successful extensions: 110107
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 110108
Number of HSP's successfully gapped: 2
Length of query: 215
Length of database: 3,060,696,203
Length adjustment: 130
Effective length of query: 85
Effective length of database: 1,835,964,253
Effective search space: 156056961505
Effective search space used: 156056961505
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 128 (53.9 bits)