BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0535.0007.p (438 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1QY00.1 B1QY00_CLOBU Sensor protein EC=2.7.13.3 404 e-111 C4IH79.1 C4IH79_CLOBU Sensory transduction protein kinase 384 e-105 C5EK33.1 C5EK33_9FIRM Sensory transduction protein kinase 238 7e-61 A8RTI1.1 A8RTI1_9CLOT Sensor protein EC=2.7.13.3 238 7e-61 Q893C2.1 Q893C2_CLOTE Sensor protein EC=2.7.13.3 231 1e-58 >B1QY00.1 B1QY00_CLOBU Sensor protein EC=2.7.13.3 Length = 435 Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust. Identities = 206/435 (47%), Positives = 290/435 (66%), Gaps = 2/435 (0%) Query: 3 KRFVSGKLRIKLILSLLFSFAVSVGIFLLLQFTAEDIAEDYFDQSSFIENQQNQAIAEFK 62 K+ KL KL +S++ S +SV I L+ F E + + Y+D+S+F+ N+ QA+++FK Sbjct: 3 KKIFLTKLERKLTVSIIISLTISVLISFLINFAGEYMLDTYYDKSNFLNNKSTQALSDFK 62 Query: 63 KYVSDNRLALSDHEQLTKWAGKMKYVTVYLFKDDHLVYSSDREEAAAGSGNHMINPILKG 122 YV N ++++DHE++ KW KYV +Y+FK++ LVY+S R A+ ++ Sbjct: 63 SYVLKNNISINDHEKIEKWVRNYKYVDIYIFKNNTLVYNSTRY-ASYSDYETLVETTNIS 121 Query: 123 IPLVPVAFADTNVQLYMECFFEYKYINIIGFVTLTLSXXXXXXXXXXXXNRKTSYIGVLE 182 ++F D N ++YM+C+FEYKY I F++ T+ N+K SYI LE Sbjct: 122 DYFDDISFYDGNGKVYMDCYFEYKYYYITLFISATIGLICFIIIMLTLINKKISYIRTLE 181 Query: 183 NEIKILEGGYLDYPITVSGDDELSSLAQSINEMRKSFMERLNSEERARLANSELVTAMSH 242 NEIKILEGG L+Y IT+ G+DEL+ LA+SINEMRKSF+ERL +E A+ ANSEL+TAMSH Sbjct: 182 NEIKILEGGDLNYNITIDGNDELAFLAESINEMRKSFIERLQNENEAKSANSELITAMSH 241 Query: 243 DLRTPLTALVGYLDIIAYQKYGTEDNLNKYIHNSREKAYQIKTLSDQLFEYFTVFNTDEG 302 DLRTPLTAL+GYLDII Y+KY TE+NL +YIHNSREKAYQIK+LSD+LFEYF VF+ E Sbjct: 242 DLRTPLTALLGYLDIIEYKKYKTEENLMQYIHNSREKAYQIKSLSDKLFEYFLVFSHKE- 300 Query: 303 DLALDTFDGMPLIDQLIDEQLLGLQNHRIQFEYLPCGTPFQIDINLTAMRRVFDNLFSNI 362 +L L+TF+ + +Q+ E+ L F+++PC +D+NL ++RRVFDNLFSNI Sbjct: 301 NLELETFNVNEIFEQIFQEEFFMLNAENFTFDFIPCNHICYLDMNLISIRRVFDNLFSNI 360 Query: 363 TKYAGTSKPVIIKCCIANQKLRLDIQNHIGPNPETIDSTGIGMKTCEKIIRQHKGSLAVT 422 KYA S+P+ I+ I N L + I+N I +++ STGIG+KTC KII H G L+ Sbjct: 361 LKYADKSEPIKIRYYIENNILIITIKNKINNTLKSVSSTGIGLKTCTKIIEMHNGKLSTQ 420 Query: 423 RTEDIYSACIHLPVK 437 + ++ + I L VK Sbjct: 421 KIDNSFIVTITLNVK 435 >C4IH79.1 C4IH79_CLOBU Sensory transduction protein kinase Length = 397 Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust. Identities = 193/395 (48%), Positives = 269/395 (68%), Gaps = 2/395 (0%) Query: 43 YFDQSSFIENQQNQAIAEFKKYVSDNRLALSDHEQLTKWAGKMKYVTVYLFKDDHLVYSS 102 Y+D+S+F+ N+ QA+++FK YV N ++++DHE++ KW KYV +Y+FK++ LVY+S Sbjct: 5 YYDKSNFLNNKSTQALSDFKSYVLKNNISINDHEKIEKWVRNYKYVDIYIFKNNTLVYNS 64 Query: 103 DREEAAAGSGNHMINPILKGIPLVPVAFADTNVQLYMECFFEYKYINIIGFVTLTLSXXX 162 R A+ ++ ++F D N ++YM+C+FEYKY I F++ T+ Sbjct: 65 TRY-ASYSDYETLVETTNISDYFDDISFYDGNGKVYMDCYFEYKYYYITLFISATIGLIC 123 Query: 163 XXXXXXXXXNRKTSYIGVLENEIKILEGGYLDYPITVSGDDELSSLAQSINEMRKSFMER 222 N+K SYI LENEIKILEGG L+Y IT+ G+DEL+ LA+SINEMRKSF+ER Sbjct: 124 FIIIMLTLINKKISYIRTLENEIKILEGGDLNYNITIDGNDELAFLAESINEMRKSFIER 183 Query: 223 LNSEERARLANSELVTAMSHDLRTPLTALVGYLDIIAYQKYGTEDNLNKYIHNSREKAYQ 282 L +E A+ ANSEL+TAMSHDLRTPLTAL+GYLDII Y+KY TE+NL +YIHNSREKAYQ Sbjct: 184 LQNENEAKSANSELITAMSHDLRTPLTALLGYLDIIEYKKYKTEENLMQYIHNSREKAYQ 243 Query: 283 IKTLSDQLFEYFTVFNTDEGDLALDTFDGMPLIDQLIDEQLLGLQNHRIQFEYLPCGTPF 342 IK+LSD+LFEYF VF+ E +L L+TF+ + +Q+ E+ L F+++PC Sbjct: 244 IKSLSDKLFEYFLVFSHKE-NLELETFNVNEIFEQIFQEEFFMLNAENFTFDFIPCNHIC 302 Query: 343 QIDINLTAMRRVFDNLFSNITKYAGTSKPVIIKCCIANQKLRLDIQNHIGPNPETIDSTG 402 +D+NL ++RRVFDNLFSNI KYA S+P+ I+ I N L + I+N I +++ STG Sbjct: 303 YLDMNLISIRRVFDNLFSNILKYADKSEPIKIRYYIENNILIITIKNKINNTLKSVSSTG 362 Query: 403 IGMKTCEKIIRQHKGSLAVTRTEDIYSACIHLPVK 437 IG+KTC KII H G L+ + ++ + I L VK Sbjct: 363 IGLKTCTKIIEMHNGKLSTQKIDNSFIVTITLNVK 397 >C5EK33.1 C5EK33_9FIRM Sensory transduction protein kinase Length = 444 Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 156/441 (35%), Positives = 230/441 (52%), Gaps = 13/441 (2%) Query: 1 LIKRFVSGKLRIKLILSLLFSFAVSVGIFLLLQFTAEDIAEDY-FDQSSFIENQQNQAIA 59 L KR +L +L ++ + S VS+ +++ L I + F ++ I +Q + Sbjct: 9 LSKRRSFSRLGTELTMAAVASALVSLALYMALNTVLFGILDRVCFSETRMIMREQ-ACVG 67 Query: 60 EFKKYVSDNRLALSDHEQLTKWAGKMKYVTVYLFKDDHLVYSSDREEAAAGSGNHMINPI 119 + YV+ N L+ D + L KWA K + + ++KD YS+D A +N Sbjct: 68 RLQAYVTGNGLSTDDSKMLDKWASGEKNLLITIYKDGRFRYSND---AKVMVMVPEMNEW 124 Query: 120 LKGIPLVPVAFADTNVQLYMECFFEYKYINIIGFVTLTLSXXXXXXXXXXXXNRKTSYIG 179 L V FAD Q + + EY Y + +S K YI Sbjct: 125 EDTSWLYEVQFADGTAQAGVSYYVEYGYYAAASVLGGVISMTAFALILVTLIRGKIRYID 184 Query: 180 VLENEIKILEGGYLDYPITVSGDDELSSLAQSINEMRKSFMERLNSEERARLANSELVTA 239 ++E EI+IL+GG LDY ITV G DEL+SLA I+ MR + ER EE A AN ELVTA Sbjct: 185 LMEQEIQILKGGDLDYRITVKGKDELASLASEIDAMRCAIKERQQKEEEAGKANRELVTA 244 Query: 240 MSHDLRTPLTALVGYLDIIAYQKYGTEDNLNKYIHNSREKAYQIKTLSDQLFEYFTVFNT 299 MSHDLRTPLT+L+GY+DI+ K G KY+++ REKAYQIK LSD+LFEYF V+ Sbjct: 245 MSHDLRTPLTSLLGYVDILQMGKEGDVGQQKKYLNSIREKAYQIKELSDKLFEYFIVYGR 304 Query: 300 DEGDLALDTFDGMPLIDQLIDEQLLGLQNH----RIQFEYLPCGTPFQIDINLTAMRRVF 355 + +L + +G + Q+++E L +++ R + + C DINL RRVF Sbjct: 305 EREELEKEEVNGAEFLGQIVEESLFDMESEGFDIRRSSDEINC--RLLADINLC--RRVF 360 Query: 356 DNLFSNITKYAGTSKPVIIKCCIANQKLRLDIQNHIGPNPETIDSTGIGMKTCEKIIRQH 415 N+FSN+ KYA ++PV + L + N++ + + +STGIG+KTC KII H Sbjct: 361 GNIFSNLLKYADRNRPVTVSYEQREDCLIICFGNYVAGDADVKESTGIGLKTCAKIIEDH 420 Query: 416 KGSLAVTRTEDIYSACIHLPV 436 GS + + + + I P+ Sbjct: 421 GGSFYIGQEDGFFLTRISFPL 441 >A8RTI1.1 A8RTI1_9CLOT Sensor protein EC=2.7.13.3 Length = 444 Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 157/436 (36%), Positives = 229/436 (52%), Gaps = 19/436 (4%) Query: 9 KLRIKLILSLLFSFAVSVGIFLLLQFTAEDIAEDYFDQSSFIENQ---QNQAIAE-FKKY 64 +L +L L+ + S VS+ +++ L I D+ F E++ + QA E + Y Sbjct: 17 RLGTELTLAAVASALVSLALYMALNTLLFGI----LDRVLFSEDRMILREQACVERLQAY 72 Query: 65 VSDNRLALSDHEQLTKWAGKMKYVTVYLFKDDHLVYSSDREEAAAGSGNHMINPILKGIP 124 V++N L+ +D + L KWA K + + ++KD YS+D A +N Sbjct: 73 VTENGLSTNDGKMLDKWASGEKNLLITIYKDGRFRYSND---AKVMVMVPEMNEWEDTSW 129 Query: 125 LVPVAFADTNVQLYMECFFEYKYINIIGFVTLTLSXXXXXXXXXXXXNRKTSYIGVLENE 184 L V FAD Q + + EY Y + +S K YI ++E E Sbjct: 130 LYEVKFADGTAQAGVSYYVEYGYYAAASVLGGVISMAVFALMLVMLIRGKIRYIDLMEQE 189 Query: 185 IKILEGGYLDYPITVSGDDELSSLAQSINEMRKSFMERLNSEERARLANSELVTAMSHDL 244 I+IL+GG LDY ITV G DEL+SLA I+ MR + ER EE A AN ELVTAMSHDL Sbjct: 190 IQILKGGDLDYRITVKGKDELASLAAEIDAMRCAIKERQQKEEEAGKANRELVTAMSHDL 249 Query: 245 RTPLTALVGYLDIIAYQKYGTEDNLNKYIHNSREKAYQIKTLSDQLFEYFTVFNTDEGDL 304 RTPLT+L+GY+DI+ +K KY+++ R+KAYQIK LSD+LFEYF V+ +L Sbjct: 250 RTPLTSLLGYVDILQMEKGEDRGQQRKYLNSIRDKAYQIKELSDKLFEYFIVYGRKREEL 309 Query: 305 ALDTFDGMPLIDQLIDEQLLGLQNH----RIQFEYLPCGTPFQIDINLTAMRRVFDNLFS 360 + +G + Q+++E L +++ R + + C DINL RRVF N+FS Sbjct: 310 EAEEVNGAEFLGQIVEESLFDMESEGFDIRRSSDEINC--RLLADINLC--RRVFGNIFS 365 Query: 361 NITKYAGTSKPVIIKCCIANQKLRLDIQNHIGPNPETIDSTGIGMKTCEKIIRQHKGSLA 420 N+ KYA ++PV + L + N++ + + +STGIG+KTC KII H GS Sbjct: 366 NLLKYADRNRPVTVSYQQRADCLIICFGNYVAEDAQEKESTGIGLKTCAKIIGDHGGSFY 425 Query: 421 VTRTEDIYSACIHLPV 436 R + I LP+ Sbjct: 426 SGREAGFFLTKISLPL 441 >Q893C2.1 Q893C2_CLOTE Sensor protein EC=2.7.13.3 Length = 434 Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 142/430 (33%), Positives = 225/430 (52%), Gaps = 7/430 (1%) Query: 9 KLRIKLILSLLFSFAVSVGIFLLLQFTAEDIAEDYFDQSSFIENQQNQAIAEFKKYVSDN 68 KL KLI+S + +F S +F +LQ + I +Y QS + + + Y+ +N Sbjct: 9 KLGHKLIISAIVTFLFSTMLFSILQTISYKIIRNYCSQSDVVSRNLKKKAESLQNYICNN 68 Query: 69 RLALSDHEQLTKWAGKMKYVTVYLFKDDHLVYSSDREEAAAGSGNHM--INPILKGIPLV 126 L++S+ Q+ +W K V +++ + L+Y+S M I P +V Sbjct: 69 NLSMSEISQIDQWIKKEDLTQVSIYRGNILLYNSKAAYRGISLKESMEYIQPWQNRHMIV 128 Query: 127 PVAFADTNVQLYMECFFEYKYINIIGFVTLTLSXXXXXXXXXXXXNRKTSYIGVLENEIK 186 F D + +E +FE++Y + + + L + RK YI VLE EIK Sbjct: 129 ---FNDGTLIAVIEYWFEHRYRDYVTYANLLIFFIFFITIMILLIQRKVRYINVLEQEIK 185 Query: 187 ILEGGYLDYPITVSGDDELSSLAQSINEMRKSFMERLNSEERARLANSELVTAMSHDLRT 246 IL+GG L+Y ITV G+DEL+ LAQ I+EMRK+F+ R +R R A++EL+ +SHDLRT Sbjct: 186 ILKGGDLNYVITVRGNDELAFLAQEIDEMRKAFISREQYADRVRTASNELMIGISHDLRT 245 Query: 247 PLTALVGYLDIIAYQKYGTEDNLNKYIHNSREKAYQIKTLSDQLFEYFTVFNTDEGDLAL 306 PLTAL+GYLD++ + ++ + +AYQIK L + LFEYF + T + + L Sbjct: 246 PLTALIGYLDVLEGGDIPASE--GTFLKKCKNRAYQIKFLINNLFEYFFLSTTTDEQIQL 303 Query: 307 DTFDGMPLIDQLIDEQLLGLQNHRIQFEYLPCGTPFQIDINLTAMRRVFDNLFSNITKYA 366 +D++I E + L + +I+IN M+RVFDNL SN KYA Sbjct: 304 SICSVNEELDEIIREHIFLLNQSGFLVKNKSKLCTNKIEINRNMMQRVFDNLLSNTCKYA 363 Query: 367 GTSKPVIIKCCIANQKLRLDIQNHIGPNPETIDSTGIGMKTCEKIIRQHKGSLAVTRTED 426 S P+ + + +L ++I N+I E++ TGIG+K CEKI+ +H G + E+ Sbjct: 364 DPSFPITLISVLNEHELIIEIHNYILDTLESLQRTGIGLKICEKILLEHNGRFIHLKNEN 423 Query: 427 IYSACIHLPV 436 ++ + P+ Sbjct: 424 VFKVQLIFPI 433 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.138 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,410,035,036 Number of extensions: 98261656 Number of successful extensions: 290748 Number of sequences better than 1.0e-05: 1918 Number of HSP's gapped: 291381 Number of HSP's successfully gapped: 1920 Length of query: 438 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 299 Effective length of database: 1,751,175,118 Effective search space: 523601360282 Effective search space used: 523601360282 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 133 (55.8 bits)