BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0535.0002.p (173 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C4IH75.1 C4IH75_CLOBU CDP-diacylglycerol-serine O-phosphatidyltr... 181 2e-44 B1QXZ6.1 B1QXZ6_CLOBU CDP-diacylglycerol--serine O-phosphatidylt... 181 2e-44 Q895C3.1 Q895C3_CLOTE CDP-diacylglycerol--serine O-phosphatidylt... 168 2e-40 Q8XKR5.1 Q8XKR5_CLOPE Phosphatidylserine synthase 165 2e-39 Q0TQW1.1 Q0TQW1_CLOP1 CDP-diacylglycerol--serine O-phosphatidylt... 165 2e-39 >C4IH75.1 C4IH75_CLOBU CDP-diacylglycerol-serine O-phosphatidyltransferase EC=2.7.8.8 Length = 166 Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 98/172 (56%), Positives = 128/172 (74%), Gaps = 7/172 (4%) Query: 1 MVKKSIPNVLTFLNLSFGVLAILEIVGGSYFISGVFLICAAVVDRYDGRIARFLNVSSTL 60 M+KK IPN+LTFLNLSFG+L+I+E++ +YF+S + +I AA+VDRYDGRIAR LNVSS + Sbjct: 1 MLKKYIPNILTFLNLSFGILSIVEVINNNYFMSALCIILAALVDRYDGRIARMLNVSSEI 60 Query: 61 GKELDSLADLVSFGVAPALLIFCKFNFLNLGHIKGIGICVLLLYVISGSYRLAKYNIGHF 120 GKELDSLADLVSFGVAP +LIF K+ N IG C++L Y+I G YRLAKYNI F Sbjct: 61 GKELDSLADLVSFGVAPGILIFFKYGLNN----YLIGTCIMLFYIICGCYRLAKYNISEF 116 Query: 121 DNVFIGMPITVAGFILAVYSLAAPINSAFTMGSVVLLLFLACFMVSKYKFNK 172 + VF+G+PIT++G +LA+ SL I + + VL++ L M+SK KF K Sbjct: 117 EGVFLGIPITISGSVLALLSL---IITYTKIIPGVLMIILGYLMISKVKFKK 165 >B1QXZ6.1 B1QXZ6_CLOBU CDP-diacylglycerol--serine O-phosphatidyltransferase EC=2.7.8.8 Length = 166 Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 98/172 (56%), Positives = 128/172 (74%), Gaps = 7/172 (4%) Query: 1 MVKKSIPNVLTFLNLSFGVLAILEIVGGSYFISGVFLICAAVVDRYDGRIARFLNVSSTL 60 M+KK IPN+LTFLNLSFG+L+I+E++ +YF+S + +I AA+VDRYDGRIAR LNVSS + Sbjct: 1 MLKKYIPNILTFLNLSFGILSIVEVINNNYFMSALCIILAALVDRYDGRIARMLNVSSEI 60 Query: 61 GKELDSLADLVSFGVAPALLIFCKFNFLNLGHIKGIGICVLLLYVISGSYRLAKYNIGHF 120 GKELDSLADLVSFGVAP +LIF K+ N IG C++L Y+I G YRLAKYNI F Sbjct: 61 GKELDSLADLVSFGVAPGILIFFKYGLNN----YLIGTCIMLFYIICGCYRLAKYNISEF 116 Query: 121 DNVFIGMPITVAGFILAVYSLAAPINSAFTMGSVVLLLFLACFMVSKYKFNK 172 + VF+G+PIT++G +LA+ SL I + + VL++ L M+SK KF K Sbjct: 117 EGVFLGIPITISGSVLALLSL---IITYTKIIPGVLMIILGYLMISKVKFKK 165 >Q895C3.1 Q895C3_CLOTE CDP-diacylglycerol--serine O-phosphatidyltransferase EC=2.7.8.8 Length = 172 Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 88/172 (51%), Positives = 125/172 (72%), Gaps = 5/172 (2%) Query: 2 VKKSIPNVLTFLNLSFGVLAILEIVGGSYFISGVFLICAAVVDRYDGRIARFLNVSSTLG 61 +K IPN+ TF NL FG ++++ YF +GVF+I AA++DRYDGRIAR LNVSS LG Sbjct: 4 IKNIIPNLFTFGNLIFGTMSLIMTFDEKYFTAGVFIIIAALLDRYDGRIARILNVSSELG 63 Query: 62 KELDSLADLVSFGVAPALLIFCKFNFLNLGHIKGI-GICVLLLYVISGSYRLAKYNIGHF 120 KELDSLADL+SFGVAP++LI+ +NF + KGI G +LL++ ++G+YRLA+YN+ F Sbjct: 64 KELDSLADLISFGVAPSMLIYNMYNFSD----KGILGYFLLLVFPVAGAYRLARYNVASF 119 Query: 121 DNVFIGMPITVAGFILAVYSLAAPINSAFTMGSVVLLLFLACFMVSKYKFNK 172 D VF G+PIT+AG +L +YSL +P + + ++++ L+ MVSK +F K Sbjct: 120 DGVFSGIPITIAGILLVLYSLGSPFIIYNQIMTYLVIILLSYLMVSKVEFKK 171 >Q8XKR5.1 Q8XKR5_CLOPE Phosphatidylserine synthase Length = 173 Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 88/175 (50%), Positives = 124/175 (70%), Gaps = 6/175 (3%) Query: 1 MVKKSIPNVLTFLNLSFGVLAILEIVGGSYFISGVFLICAAVVDRYDGRIARFLNVSSTL 60 M K SIPN+ TF+NLSFG+L++L Y ++ +F++ A +VDRYDGR+AR+LNVSS L Sbjct: 1 MRKSSIPNIFTFINLSFGILSLLATFKSEYLLAAIFILLAGLVDRYDGRVARYLNVSSDL 60 Query: 61 GKELDSLADLVSFGVAPALLIFCKFNFLNLGHIKGIGICVLLLYVISGSYRLAKYNIGHF 120 GKELDSLADLVSFGVAP++L F +NF +LG + IG +LL + I G++RLA+YN F Sbjct: 61 GKELDSLADLVSFGVAPSVLTFVFYNFESLGPMGIIGYALLLCFPICGAFRLARYNATEF 120 Query: 121 DNVFIGMPITVAGFILAVYSLAAPINSAFTMG---SVVLLLFLACFMVSKYKFNK 172 D VF G+PIT+AG ++A++ L ++ FT+ VV+L+ + MVS + K Sbjct: 121 DGVFRGVPITIAGAVVALFIL---LSIKFTLNILFPVVILVVFSYLMVSNLQLKK 172 >Q0TQW1.1 Q0TQW1_CLOP1 CDP-diacylglycerol--serine O-phosphatidyltransferase EC=2.7.8.8 Length = 173 Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 88/175 (50%), Positives = 124/175 (70%), Gaps = 6/175 (3%) Query: 1 MVKKSIPNVLTFLNLSFGVLAILEIVGGSYFISGVFLICAAVVDRYDGRIARFLNVSSTL 60 M K SIPN+ TF+NLSFG+L++L Y ++ +F++ A +VDRYDGR+AR+LNVSS L Sbjct: 1 MRKSSIPNIFTFINLSFGILSLLATFKSEYLLAAIFILLAGLVDRYDGRVARYLNVSSDL 60 Query: 61 GKELDSLADLVSFGVAPALLIFCKFNFLNLGHIKGIGICVLLLYVISGSYRLAKYNIGHF 120 GKELDSLADLVSFGVAP++L F +NF +LG + IG +LL + I G++RLA+YN F Sbjct: 61 GKELDSLADLVSFGVAPSVLTFVFYNFESLGPMGIIGYALLLCFPICGAFRLARYNATEF 120 Query: 121 DNVFIGMPITVAGFILAVYSLAAPINSAFTMG---SVVLLLFLACFMVSKYKFNK 172 D VF G+PIT+AG ++A++ L ++ FT+ VV+L+ + MVS + K Sbjct: 121 DGVFRGVPITIAGAVVALFIL---LSIKFTLNILFPVVILVVFSYLMVSNLQLKK 172 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.332 0.147 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 949,007,364 Number of extensions: 37102327 Number of successful extensions: 128449 Number of sequences better than 1.0e-05: 1041 Number of HSP's gapped: 127677 Number of HSP's successfully gapped: 1041 Length of query: 173 Length of database: 3,060,696,203 Length adjustment: 126 Effective length of query: 47 Effective length of database: 1,873,648,313 Effective search space: 88061470711 Effective search space used: 88061470711 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 126 (53.1 bits)