BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0534.0024.p (257 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B5XQS3.1 B5XQS3_KLEP3 Conserved domain protein 202 3e-50 A6T918.1 A6T918_KLEP7 Putative uncharacterized protein 198 4e-49 C4X8A6.1 C4X8A6_KLEPN Putative uncharacterized protein 197 1e-48 A8VVP5.1 A8VVP5_9BACI Rhodanese domain protein 168 4e-40 B2G515.1 B2G515_LACRJ Putative uncharacterized protein 156 2e-36 >B5XQS3.1 B5XQS3_KLEP3 Conserved domain protein Length = 251 Score = 202 bits (513), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 106/254 (41%), Positives = 141/254 (55%), Gaps = 5/254 (1%) Query: 1 MASKQWDHLVHYINNLDNVVEVFGEKGLVAFKGGSHKDWGTFNTLSYFGLTYIEFLGIES 60 MA+ QWDH V ++N D ++ F ++ L A GG H WGT N LSYFGLTYIEFL I Sbjct: 1 MATLQWDHAVQFVNQPDAAIQTFADQQLRAVAGGRHPGWGTRNALSYFGLTYIEFLAISD 60 Query: 61 P-ELARSTGYNLVVQDAVAALPEHEVLSRVVIRTDDIEEMXXXXXXXXXXXXPIMDGKRL 119 P EL +T L+ +DA LPE+E L RV +R+DDIE PI+DG+R Sbjct: 61 PDELRAATDRFLLSRDAERLLPENEALFRVALRSDDIEATHDQLRRKGLAVSPIVDGQRN 120 Query: 120 DMSGSLIEWRMMTIAGDFGGLVYPFIIQWKGTDEERLARLTASGIVQPHPAGRAEIRRAV 179 D G++I WR+ TI GD GLVYPF++QW D RLARL A + PHP G + +AV Sbjct: 121 DPQGNIIRWRIFTIDGDTDGLVYPFVLQWGEDDTTRLARLRAQELDVPHPLGDIALEQAV 180 Query: 180 FRVSDPAAAAGHWADLFGLEVVKSTDTSAVLQIGDKFYDFVKGEENRFMQVILDTDSELL 239 F V +P A W L G L +G +++ F +G N+ +++ + L Sbjct: 181 FEVVNPQAVRDRWQALLGF----PPQGEQGLDVGGQWFTFREGPANQLTELVFRVANPAL 236 Query: 240 GGQTIRIGEGEYVF 253 GQ R+G G Y F Sbjct: 237 KGQRFRVGNGVYRF 250 >A6T918.1 A6T918_KLEP7 Putative uncharacterized protein Length = 251 Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 104/254 (40%), Positives = 140/254 (55%), Gaps = 5/254 (1%) Query: 1 MASKQWDHLVHYINNLDNVVEVFGEKGLVAFKGGSHKDWGTFNTLSYFGLTYIEFLGIES 60 MA+ QWDH V ++N + +E+F + L A GG H WGT N LSYFGLTYIEFL I Sbjct: 1 MATLQWDHAVQFVNQPEAAIEIFAGQQLRAVAGGRHPGWGTRNALSYFGLTYIEFLAIAD 60 Query: 61 P-ELARSTGYNLVVQDAVAALPEHEVLSRVVIRTDDIEEMXXXXXXXXXXXXPIMDGKRL 119 P EL +T L+ +DA LPE+E L RV +R+DDI+ PI+DG+R Sbjct: 61 PDELRAATDKFLLSRDAARLLPENEALFRVALRSDDIDATHDQLRRTGVTVSPIVDGQRN 120 Query: 120 DMSGSLIEWRMMTIAGDFGGLVYPFIIQWKGTDEERLARLTASGIVQPHPAGRAEIRRAV 179 D G++I WR+ TI GD GLVYPF++QW D RL RL A + PHP G + +AV Sbjct: 121 DPQGNIIRWRIFTIDGDTAGLVYPFVLQWGEDDATRLTRLRAQRLDAPHPLGDITLEQAV 180 Query: 180 FRVSDPAAAAGHWADLFGLEVVKSTDTSAVLQIGDKFYDFVKGEENRFMQVILDTDSELL 239 F V +P A W L G + L +G + + F +G N+ +++ + L Sbjct: 181 FEVVNPQAVRDRWQALLGFPPLGEQG----LDVGGQQFIFREGAANQLTELVFRVANPAL 236 Query: 240 GGQTIRIGEGEYVF 253 GQ R+G G Y F Sbjct: 237 KGQRFRVGNGVYRF 250 >C4X8A6.1 C4X8A6_KLEPN Putative uncharacterized protein Length = 251 Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 104/254 (40%), Positives = 140/254 (55%), Gaps = 5/254 (1%) Query: 1 MASKQWDHLVHYINNLDNVVEVFGEKGLVAFKGGSHKDWGTFNTLSYFGLTYIEFLGIES 60 MA+ QWDH V ++N + +E+F + L A GG H WGT N LSYFGLTYIEFL I Sbjct: 1 MATLQWDHAVQFVNQPEAAIEIFAGQQLWAVAGGHHPGWGTRNALSYFGLTYIEFLAIAD 60 Query: 61 P-ELARSTGYNLVVQDAVAALPEHEVLSRVVIRTDDIEEMXXXXXXXXXXXXPIMDGKRL 119 P EL +T L+ +DA LPE+E L RV +R+DDI+ PI+DG+R Sbjct: 61 PDELRAATDKFLLSRDAARLLPENEALFRVALRSDDIDATHDQLRRTGVTVSPIVDGQRN 120 Query: 120 DMSGSLIEWRMMTIAGDFGGLVYPFIIQWKGTDEERLARLTASGIVQPHPAGRAEIRRAV 179 D G++I WR+ TI GD GLVYPF++QW D RL RL A + PHP G + +AV Sbjct: 121 DPQGNIIRWRIFTIDGDTAGLVYPFVLQWGEDDATRLTRLRAQRLDAPHPLGDITLEQAV 180 Query: 180 FRVSDPAAAAGHWADLFGLEVVKSTDTSAVLQIGDKFYDFVKGEENRFMQVILDTDSELL 239 F V +P A W L G + L +G + + F +G N+ +++ + L Sbjct: 181 FVVVNPQAVRDRWQALLGFPPLGEQG----LDVGGQQFIFREGAANQLTELVFRVANPAL 236 Query: 240 GGQTIRIGEGEYVF 253 GQ R+G G Y F Sbjct: 237 KGQRFRVGNGVYRF 250 >A8VVP5.1 A8VVP5_9BACI Rhodanese domain protein Length = 251 Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 96/251 (38%), Positives = 132/251 (52%), Gaps = 5/251 (1%) Query: 7 DHLVHYINNLDNVVEVFGEKGLVAFKGGSHKDWGTFNTLSYFGLTYIEFLGIE-SPELAR 65 DH+VHY+N++ VE F ++G+ A GGSHK WGT N L+YF L+YIE+LGIE L + Sbjct: 4 DHVVHYVNDVPGAVETFKQEGIHAVMGGSHKQWGTHNGLAYFNLSYIEWLGIEDESSLKQ 63 Query: 66 STGYNLVVQDAVAALPEHEVLSRVVIRTDDIEEMXXXXXXXXXXXXPIMDGKRLDMSGSL 125 + G N V QDA LPE VL + IRT IE++ ++ R D G Sbjct: 64 AYGQNPVFQDAGVLLPESPVLHKFAIRTSHIEQVCQSLEEKGIRTSGVLANSRQDRKGRS 123 Query: 126 IEWRMMTIAGDFGGLVYPFIIQWKGTDEERLARLTASGIVQPHPAGRAEIRRAVFRVSDP 185 I W+M+ + + YPF I+W+ +D ERL +L SG++ + I VF S P Sbjct: 124 IRWKMLILENSPEQMPYPFFIEWEESDCERLKKLKESGVIPERASHDIRISELVFHTSSP 183 Query: 186 AAAAGHWADLFGLEVVKSTDTSAVLQIGDKFYDFVKGEENRFMQVILDTDSELLGGQTIR 245 A WA LFG++V D L I F KG +NR VIL + +LL + I+ Sbjct: 184 ADVKDEWASLFGIQV--EDDEVNTLNIDGVRLVFRKGIQNRLTSVIL--EGKLLDDKRIK 239 Query: 246 IGEGEYVFQTS 256 I EY +S Sbjct: 240 IEGSEYKLVSS 250 >B2G515.1 B2G515_LACRJ Putative uncharacterized protein Length = 258 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 88/232 (37%), Positives = 124/232 (53%), Gaps = 5/232 (2%) Query: 5 QWDHLVHYINNLDNVVEVFGEKGLVAFKGGSHKDWGTFNTLSYFGLTYIEFLGIESPELA 64 WDH + + NL + ++ F KGL GG H+ WGT N L YFGL YIE L I + E A Sbjct: 6 NWDHTMVDVTNLQDAIDYFNSKGLAFTPGGHHEYWGTKNALDYFGLNYIELLTIANKEKA 65 Query: 65 RSTGY--NLVVQDAVA-ALPEHEVLSRVVIRTDDIEEMXXXXXXXXXXXXPIMDGKRLDM 121 ++ Y N + DAV + ++ + I+TD+IEE I DGKR+D Sbjct: 66 KAFPYENNSAIHDAVEDYFAGIQRITTIAIQTDNIEETHQRLEGLGLNVGDITDGKRVDP 125 Query: 122 SGSLIEWRMMTIAGDF-GGLVYPFIIQWKGTDEERLARLTASGIVQPHPAGRAEIRRAVF 180 +G LI+W++ + + L PF IQW D++R L G+++ HPAG +++A+F Sbjct: 126 AGKLIQWKIFYVNDELVNHLPAPFFIQWGNNDDQRREDLKKQGLIKFHPAGDLFVKQAIF 185 Query: 181 RVSDPAAAAGHWADLFGLEVVKSTDTSAVLQIGDKFYDFVKGEENRFMQVIL 232 VSDP AA W+ L EVV DT + IGDK F G ENR ++I Sbjct: 186 NVSDPEEAAKQWSALLQAEVVSEGDTYTI-NIGDKQLVFKAGVENRLFKLIF 236 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.138 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,494,172,981 Number of extensions: 59501207 Number of successful extensions: 158367 Number of sequences better than 1.0e-05: 126 Number of HSP's gapped: 158120 Number of HSP's successfully gapped: 126 Length of query: 257 Length of database: 3,060,696,203 Length adjustment: 133 Effective length of query: 124 Effective length of database: 1,807,701,208 Effective search space: 224154949792 Effective search space used: 224154949792 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 130 (54.7 bits)