BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0533.0016.p (322 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DB38.1 B1DB38_9BACL Putative uncharacterized protein 451 e-125 A7AIF9.1 A7AIF9_9PORP Putative uncharacterized protein 177 1e-42 Q6DAD6.1 Q6DAD6_ERWCT Putative exported protein 64 2e-08 C4T4L0.1 C4T4L0_YERIN Putative uncharacterized protein 62 7e-08 C4SHL0.1 C4SHL0_YERMO Putative uncharacterized protein 59 7e-07 >B1DB38.1 B1DB38_9BACL Putative uncharacterized protein Length = 326 Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust. Identities = 218/312 (69%), Positives = 256/312 (82%) Query: 6 ALQQLLQVANDSMSVSCHAVPAWDIPGFYFDMAGHQAAKRLMEEDAQAACTTALAFGHTG 65 A +LL++A +S+SVSCHAVP W IPGFYFD AGHQAAK+LME DAQAA TALA+ TG Sbjct: 14 AKDELLRLAEESLSVSCHAVPVWHIPGFYFDTAGHQAAKKLMEADAQAAYATALAYRLTG 73 Query: 66 RAEYADKALELIDGWAAINKVLTGDDGPLVSAYLGTGLIQAAGLLQGYSGWRKENQDQFI 125 R +YADKA+EL+ GWA+IN+ L DGPLVSAYLG G +QAA ++ Y GWR+E+QDQF+ Sbjct: 74 RPDYADKAMELLKGWASINRELADKDGPLVSAYLGAGFLQAAEWIKAYPGWREEDQDQFV 133 Query: 126 AWMTGVCLPEWDRIPLRNNWWSWSLYAQLSLFRLMGDQARFAEEVANLKEHIDSSLETSG 185 W+T V LPEWDRIPLRNNWWSWSLYAQL L+R + DQA FAEE A+LKEHIDSSL +G Sbjct: 134 YWITTVLLPEWDRIPLRNNWWSWSLYAQLLLYRFLDDQAGFAEEAAHLKEHIDSSLLLTG 193 Query: 186 LIPEETTRGSNAVWYHYFSLAPLTAAIKLVADTTGENLFHWTSPGGKSVKKALDTFFYYA 245 IPEET RG+N++WYHYF+LAPLTAA K V D TGE+LF WTSP G ++KKALDT YYA Sbjct: 194 FIPEETLRGTNSIWYHYFALAPLTAAAKQVLDYTGEDLFRWTSPSGNTIKKALDTLLYYA 253 Query: 246 DGRIAEWPYGDAQKFPAPLASDTWPLDLYEAMSRIYSDPEYERFVSPYRPITGNKNINSG 305 +GR EWPY Q P PL+S TWPLDLYEAMSRIY DPEY++FVSPYRPI GN+N NSG Sbjct: 254 NGRAGEWPYEKGQNVPDPLSSQTWPLDLYEAMSRIYEDPEYDQFVSPYRPIIGNRNKNSG 313 Query: 306 YYQSYAWIFPEL 317 Y+QS+AW+FPEL Sbjct: 314 YFQSHAWVFPEL 325 >A7AIF9.1 A7AIF9_9PORP Putative uncharacterized protein Length = 1065 Score = 177 bits (449), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 109/313 (34%), Positives = 162/313 (51%), Gaps = 13/313 (4%) Query: 6 ALQQLLQVANDSMSVSCHAVPAWDIPGFYFDMAGHQAAKRLMEEDAQAACTTALAFGHTG 65 A QL++ A+ V+ HA + +PG+Y H+A +++DA AA +ALA+ +G Sbjct: 50 AYVQLIRYADSIQQVTHHARNDFAVPGYYVKPEEHRANSLALQQDAFAAYCSALAYRLSG 109 Query: 66 RAEYADKALELIDGWAAINKVLTGDDGPLVSAYLGTGLIQAAGLLQGYSGWRKENQDQFI 125 + Y +KA ++ WA INK + DGPLV +Y G+ + AA L+ S W + + F Sbjct: 110 KKRYGEKACYFMNAWATINKKYSEPDGPLVMSYSGSAFLMAAELMDDTSVWDADEKQLFK 169 Query: 126 AWMTGVCLPEWDRIPLR-NNWWSWSLYAQLSLFRLMGDQARFAEEVANLKEHIDSSLETS 184 W+T V + I R NNW W L + + D+ + +K + + + Sbjct: 170 DWVTSVYRKATNEIRERKNNWADWGRLGSLLVASFLDDKEEIERNIKLIKGDLGDKIASD 229 Query: 185 GLIPEETTRGSNAVWYHYFSLAPLTAAIKLVADTTGENLFHWTSPGGKSVKKALDTFFYY 244 G +PEE RG N +WY YFSLAP+TA+ + + TGENLF W GKSVKKALD Y Sbjct: 230 GHMPEEVRRGKNGLWYTYFSLAPMTASFWVTYNLTGENLFLWEQE-GKSVKKALDYLLRY 288 Query: 245 ADGRIAEWPYGDAQKFPAPLASDTWPLDLYEAMSRIYSDPEYERFVSPYRPITGNKNINS 304 +EW + + P TWP +L EAM+ IY + Y +V RP +I Sbjct: 289 QKSP-SEWKWYEG---PNVGTHATWPDNLLEAMAGIYGESAYGEYVENSRP-----HIYP 339 Query: 305 GYYQSYAWIFPEL 317 ++ +AW+FP L Sbjct: 340 VHH--FAWVFPTL 350 >Q6DAD6.1 Q6DAD6_ERWCT Putative exported protein Length = 430 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 32/234 (13%) Query: 45 RLMEEDAQAACTTALAFGHTGRAEYADKALELIDGW---------------AAINKVLTG 89 RL + AQ T LA+ +G+ YADKA+ +I W + + G Sbjct: 135 RLAKFTAQTQALT-LAWYFSGKQTYADKAMSMIRTWFIDPATRMNPNLDFAQGVPGIAPG 193 Query: 90 D-DGPLVSAYLGTGLIQAAGLLQGYSGWRKENQDQFIAWMTGVCLPEW--------DRIP 140 G L Y T ++ + +L+ GW +++ Q WM+ W Sbjct: 194 RGSGVLDGRYFSTRIVDSLIMLRHAPGWTPQDEQQMQKWMSDYL--HWLQTSKLGKKEAT 251 Query: 141 LRNNWWSWSLYAQLSLFRLMGDQARFAEEVANL-KEHIDSSLETSGLIPEETTRGSNAVW 199 +NN SW + +G + + +A L +E +D + G PEE R + + Sbjct: 252 AKNNHGSWYTVQVAGIAWYLG-KIDVVKSMAQLQREKLDHQFQPDGAQPEELAR-TRSFH 309 Query: 200 YHYFSLAPLTAAIKLVADTTGENLFHWTSPGGKSVKKALDTFFYYADGRIAEWP 253 Y YF+L +T + ++A GEN++ + +P G SV KALD Y D A WP Sbjct: 310 YSYFNLQAITD-MAILASRVGENIWQYQTPKGSSVIKALDFMAPYLDENKA-WP 361 >C4T4L0.1 C4T4L0_YERIN Putative uncharacterized protein Length = 445 Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 66/234 (28%), Positives = 101/234 (43%), Gaps = 30/234 (12%) Query: 45 RLMEEDAQAACTTALAFGHTGRAEYADKALELIDGW-----AAINKVLTGDDG-PLVSAY 98 RL + AQ T LA+ +G+ +YADKA+ +I W +N L G P ++A Sbjct: 150 RLADFTAQVQALT-LAWYFSGQQKYADKAISMIRTWFINPQTRMNPNLDYAQGVPGIAAG 208 Query: 99 LGTG----------LIQAAGLLQGYSGWRKENQDQFIAWMTGVCLPEW--------DRIP 140 GTG ++ + +L+ + W +++ Q WMT W Sbjct: 209 RGTGVLDGRYFATRIVDSLIMLRQNTRWTAQDEKQMQQWMTEYL--HWLQHSPAGKKEAA 266 Query: 141 LRNNWWSWSLYAQLSLFRLMGDQARFAEEVANLKEHIDSSLETSGLIPEETTRGSNAVWY 200 +NN +W + + R AE LK +D+ L G P E R + + Y Sbjct: 267 AQNNHGNWYTVQVAGIAWYLQQPQRVAEMADLLKTKLDTQLAAEGSQPLELAR-TRSFHY 325 Query: 201 HYFSLAPLTAAIKLVADTTGENLFHWTSPGGKSVKKALDTFFYYADGRIAEWPY 254 YFSL T +L AD +L+ + +P G S+ KALD Y+D + WPY Sbjct: 326 SYFSLQAATLMAQL-ADKVQIDLWRYQTPNGSSLIKALDFMAPYSDEQTT-WPY 377 >C4SHL0.1 C4SHL0_YERMO Putative uncharacterized protein Length = 408 Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 66/235 (28%), Positives = 102/235 (43%), Gaps = 32/235 (13%) Query: 45 RLMEEDAQAACTTALAFGHTGRAEYADKALELIDGW-----AAINKVLTGDDG-PLVSAY 98 RL + AQ T LA+ + +YADKA+ LI W +N L G P ++A Sbjct: 118 RLADFTAQVQTLT-LAWYFSSEQQYADKAISLIRAWFIAPQTRMNPNLNFAQGVPGIAAG 176 Query: 99 LGTG----------LIQAAGLLQGYSGWRKENQDQFIAWMTGVCLPEW--------DRIP 140 GTG ++ + +L+ W E++ Q WMT +W Sbjct: 177 RGTGVLDGRYFATRIVDSLMMLRQNQHWTAEDESQMRQWMTAYL--QWLQNSPAGKKEAS 234 Query: 141 LRNNWWSWSLYAQLSLFRLMGDQARFAEEVAN-LKEHIDSSLETSGLIPEETTRGSNAVW 199 +NN +W AQ++ Q + E+A LK +D+ L G P E R + + Sbjct: 235 AQNNHGNW-YTAQVAGIAWYLQQPKVVAEMAELLKTKLDTQLAAEGAQPLELAR-TRSFH 292 Query: 200 YHYFSLAPLTAAIKLVADTTGENLFHWTSPGGKSVKKALDTFFYYADGRIAEWPY 254 Y YFSL +L AD +L+ + +P G + KALD ++D + +WPY Sbjct: 293 YSYFSLQAAVLMAQL-ADKVHIDLWRYQTPNGSGLIKALDFMAPFSDEQ-KKWPY 345 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.134 0.431 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,127,599,044 Number of extensions: 92795278 Number of successful extensions: 198521 Number of sequences better than 1.0e-05: 14 Number of HSP's gapped: 198555 Number of HSP's successfully gapped: 14 Length of query: 322 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 186 Effective length of database: 1,779,438,163 Effective search space: 330975498318 Effective search space used: 330975498318 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)