BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0533.0012.p (657 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DB43.1 B1DB43_9BACL Putative uncharacterized protein 1148 0.0 B3K5J4.1 B3K5J4_9BACI Putative uncharacterized protein 894 0.0 C0AAP9.1 C0AAP9_9BACT Putative uncharacterized protein 504 e-140 B6YYJ3.1 B6YYJ3_9RHOB Putative uncharacterized protein 481 e-133 Q1M4Z1.1 Q1M4Z1_RHIL3 Putative uncharacterized protein 479 e-133 >B1DB43.1 B1DB43_9BACL Putative uncharacterized protein Length = 657 Score = 1148 bits (2969), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/657 (81%), Positives = 585/657 (89%) Query: 1 MRFRQVHLDYHTSEAITPIGACFDKKQFQEMLKLGNVDSVTVFSKCHHGWAYHPSEANEI 60 MRFRQVHLD+HTSEAITPIG FDKKQFQEML+LG+VDS+TVFSKCHHGWAYHPSEANEI Sbjct: 1 MRFRQVHLDFHTSEAITPIGQRFDKKQFQEMLRLGHVDSITVFSKCHHGWAYHPSEANEI 60 Query: 61 HPGLSFDLLGAQIEAAHEINVKTPVYLSAGLDEKLARRHPEWLIRDENDQTNWVKGFLEP 120 HPGL+FDLLGAQIEAAHEI VKTPVYLSAGLDEKLARRHPEWLIRDEND T WVKGFLEP Sbjct: 61 HPGLNFDLLGAQIEAAHEIGVKTPVYLSAGLDEKLARRHPEWLIRDENDTTGWVKGFLEP 120 Query: 121 GYHQFCMNTPYLDILIAQTREVVSRYDLDGLFFDIVGVRKCYCHSCIESVRREGGDPRDE 180 GYHQFCMN+PYL IL+ Q RE VSRYD DG+F DIVGVRKCYCH+CIES RREG DPRDE Sbjct: 121 GYHQFCMNSPYLGILLEQIREAVSRYDADGVFLDIVGVRKCYCHNCIESARREGMDPRDE 180 Query: 181 QAMRRLWERTYANYTARVKEAAEAIKPGLPIFHNGGHIARGRRDLAFMNDHLELESLPTG 240 QAMR LWERTYANYTARVKE E++KPGLPIFHNGGHI RGRRDLA MN HLELESLPTG Sbjct: 181 QAMRSLWERTYANYTARVKETVESVKPGLPIFHNGGHIKRGRRDLAMMNSHLELESLPTG 240 Query: 241 GWGYDHFPLSARYAQTLGVQFLGMTGKFHTSWGEFGGYKHPNALRYETALSIANGAGCSI 300 GWGYDHFPLSARYAQTLGV FLGMTGKFHTSWGEFGGYKHPNALRYE ALSIANGA CSI Sbjct: 241 GWGYDHFPLSARYAQTLGVDFLGMTGKFHTSWGEFGGYKHPNALRYEAALSIANGAKCSI 300 Query: 301 GDQLHPDGHMDEATYALIGEAYREVESKEAWCTQATNVADIALLSLEAAGVHPQAQTGGR 360 GDQLHPDG+MD+ATY LIG AY EVESKEAWC TNVAD+ALLSLEA GVH +A+ G Sbjct: 301 GDQLHPDGYMDKATYTLIGAAYSEVESKEAWCADTTNVADVALLSLEAVGVHEKARDGQS 360 Query: 361 KPPSDAGAARILLEGKFLFDVIDKEHDFTAYKVLILPDYVAVDEGLRGQLELFLQHGGKI 420 K SDAGA R+LLEGK LFDVIDKEHDF AYKVLILPDYVAVD+ LRG+LEL+LQ GGK+ Sbjct: 361 KGASDAGAVRMLLEGKILFDVIDKEHDFDAYKVLILPDYVAVDDSLRGKLELYLQQGGKL 420 Query: 421 LATGWSGLDPEGTQFAVDFGARHVEANPYRPDYFRPAFKPGSLQKASFIFYAQGQKIELA 480 LATGWSGLDP G ++A+DFG R++ NPY+PDYFRP F SL++ASFIFY+QGQKIEL Sbjct: 421 LATGWSGLDPAGEEYAIDFGVRYLGVNPYKPDYFRPGFALKSLREASFIFYSQGQKIELN 480 Query: 481 GGTELGRREDPYFNRDVFTFCSHQHSPSSYTNGGPGMVENSNGIYIAWNVFEDYAAKGSL 540 GGTELGRREDPYFNRD FTFCSHQH+PSS+ NGGPGMVE+ NGIYIAWNVFEDYA KGSL Sbjct: 481 GGTELGRREDPYFNRDAFTFCSHQHTPSSHNNGGPGMVESGNGIYIAWNVFEDYAKKGSL 540 Query: 541 IVKETVLHALNRLLPEKTLHTNLPAQGVVTLQEQKEEKRLVNHLLYASPVRRGENIEVIE 600 I+KE VL+AL+RLLP KTL TNLPAQGVVTLQEQKE RLVNHLLY SPVRRG+ +E+IE Sbjct: 541 ILKEAVLYALDRLLPGKTLQTNLPAQGVVTLQEQKELNRLVNHLLYVSPVRRGDGVEIIE 600 Query: 601 DIIPLYDVQVSVRTEGRVKNVYLAPQMTPLSFSREEQNIHYTVPVLECHQMVVLDYE 657 DIIPL++VQV++RT VK VYLAPQMTPL FS + + YTVP LECHQM+V+DYE Sbjct: 601 DIIPLHNVQVTIRTASPVKQVYLAPQMTPLPFSNNDGVVAYTVPELECHQMIVMDYE 657 >B3K5J4.1 B3K5J4_9BACI Putative uncharacterized protein Length = 661 Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/660 (65%), Positives = 511/660 (77%), Gaps = 6/660 (0%) Query: 1 MRFRQVHLDYHTSEAITPIGACFDKKQFQEMLKLGNVDSVTVFSKCHHGWAYHPSEANEI 60 MRFRQVHLD+HTSEAI IG+ F K QFQ ML+ G+VDS+TVFSKCHHGWAYHPSEANEI Sbjct: 1 MRFRQVHLDFHTSEAIAGIGSRFSKPQFQNMLRAGHVDSITVFSKCHHGWAYHPSEANEI 60 Query: 61 HPGLSFDLLGAQIEAAHEINVKTPVYLSAGLDEKLARRHPEWLIRDENDQTNWVKGFLEP 120 HP L+FDLLG I AAHEI VKTPVYLSAGLDEKLARRHPEWLIRD D+T W + F+ P Sbjct: 61 HPHLTFDLLGEMISAAHEIGVKTPVYLSAGLDEKLARRHPEWLIRDAEDRTRWARDFMTP 120 Query: 121 GYHQFCMNTPYLDILIAQTREVVSRYDLDGLFFDIVGVRKCYCHSCIESVRREGGDPRDE 180 GYH+FC NTPYLDIL+AQ REVVSRYD DG+F DIVG+R+C C C+ ++R G DPRDE Sbjct: 121 GYHEFCFNTPYLDILLAQIREVVSRYDADGIFLDIVGIRQCRCQHCVAALRSAGHDPRDE 180 Query: 181 QAMRRLWERTYANYTARVKEAAEAIKPGLPIFHNGGHIARGRRDLAFMNDHLELESLPTG 240 A+ L E TY NY RV+E + IKPGLP+FHN GH RGRRDLA +N HLELESLPTG Sbjct: 181 AAVAALGESTYLNYARRVRETIDEIKPGLPVFHNSGHQRRGRRDLAQVNSHLELESLPTG 240 Query: 241 GWGYDHFPLSARYAQTLGVQFLGMTGKFHTSWGEFGGYKHPNALRYETALSIANGAGCSI 300 GWGYDHFPLSARYAQTLG+ +LGMTGKFHTSWGEFGGYKHPNALR+ETALS+A+GA CSI Sbjct: 241 GWGYDHFPLSARYAQTLGMDYLGMTGKFHTSWGEFGGYKHPNALRFETALSLAHGAKCSI 300 Query: 301 GDQLHPDGHMDEATYALIGEAYREVESKEAWCTQATNVADIALLSLEAAG-VHPQA-QTG 358 GDQLHP G MDEATYALIG AY EVE+KE WC+ ++VADIA+LSLEAA P+A ++ Sbjct: 301 GDQLHPSGLMDEATYALIGTAYAEVEAKEPWCSATSSVADIAVLSLEAAWEACPEARKSD 360 Query: 359 GRKPPSDAGAARILLEGKFLFDVIDKEHDFTAYKVLILPDYVAVDEGLRGQLELFLQHGG 418 R +DAGA RIL EG +L+D++D DF+ Y VLILPD V + L + F GG Sbjct: 361 DRNNLADAGAVRILTEGHYLYDIVDATADFSLYNVLILPDEVPIWPELEEDIRAFTAGGG 420 Query: 419 KILATGWSGLDPEGTQFAVDFGARHVEANPYRPDYFRPAFKPGSLQKASFIFYAQGQKIE 478 K+LA+G SGL+ G F +D G +PYRP YFRP F PG L ASF+ Y +GQ +E Sbjct: 421 KVLASGRSGLNAAGDAFTLDLGLNWKGQSPYRPSYFRPDFVPGPLMPASFVMYGEGQLVE 480 Query: 479 LAGGTELGRREDPYFNRDVFTFCSHQHSPSSYTNGGPGMVENSNGIYIAWNVFEDYAAKG 538 L GG LG RE+PYFNRDVFTFCSHQH+PS+ +GGPGM+E++NGIYIAWNVF DYA G Sbjct: 481 LNGGRTLGSRENPYFNRDVFTFCSHQHTPSAGEDGGPGMIESTNGIYIAWNVFGDYADNG 540 Query: 539 SLIVKETVLHALNRLLPEKTLHTNLPAQGVVTLQEQKEEKRLVNHLLYASPVRRGENIEV 598 LI+KE VLHA++RLLP+ TL +LPA+G+ TLQ Q+EE R +NHLLYASPV +G +EV Sbjct: 541 HLILKEMVLHAIDRLLPQPTLRCDLPARGIATLQYQQEENRYINHLLYASPVLKGR-VEV 599 Query: 599 IEDIIPLYDVQVSVRTEG--RVKNVYLAPQMTPLSFS-REEQNIHYTVPVLECHQMVVLD 655 IEDI+PL DV V +R ++ VYLAP M L ++ E I+YTVP L+ HQMVVL+ Sbjct: 600 IEDIVPLRDVSVRLRLPAVPSIRRVYLAPSMDELPYTIGSEGEINYTVPNLDNHQMVVLE 659 >C0AAP9.1 C0AAP9_9BACT Putative uncharacterized protein Length = 687 Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust. Identities = 285/689 (41%), Positives = 383/689 (55%), Gaps = 38/689 (5%) Query: 1 MRFRQVHLDYHTSEAITPIGACFDKKQFQEMLKLGNVDSVTVFSKCHHGWAYHPSEANEI 60 +RFRQVHLD+HT I IG F K+QFQ+ LK G++DS+T+FSKCHHG++YHP++ + Sbjct: 4 LRFRQVHLDFHTHGDIPGIGEKFSKRQFQDALKTGHIDSITLFSKCHHGYSYHPTKIGRL 63 Query: 61 HPGLSFDLLGAQIEAAHEINVKTPVYLSAGLDEKLARRHPEWLIRDENDQTNWVKGFLEP 120 HP L FDLL QIEA EI V+ P+Y+SAGLDE A HPEWL++ + T + Sbjct: 64 HPNLKFDLLARQIEACREIGVRCPIYISAGLDEVAATTHPEWLVKRRDGVTYAPIDHV-- 121 Query: 121 GYHQFCMNTPYLDILIAQTREVVSRY-DLDGLFFDIVGVRKCYCHSCIESVRREGGDPRD 179 G+ + N+PYLD L AQ EVV R+ D DG+F DI+G Y + ++ DP + Sbjct: 122 GFKRLNFNSPYLDYLCAQIEEVVQRWPDNDGIFLDIIGAPHDYSEHSLREMKSLQLDPAN 181 Query: 180 EQAMRRLWERTYANYTARVKEAAEAIKPGLPIFHNGGHIARGRRDLAFMNDHLELESLPT 239 + + Y R A +++ P+FHNGGHI G + N H ELESLPT Sbjct: 182 PADVEEHAQLVLLRYYERTNAAVRSVRADTPVFHNGGHIPVGSKGFNLFNSHFELESLPT 241 Query: 240 GGWGYDHFPLSARYAQTLGVQFLGMTGKFHTSWGEFGGYKHPNALRYETALSIANGAGCS 299 GGWGYDHF SARYA T +LGMTGKFHT+WGEFGG+K P AL YE +A GA CS Sbjct: 242 GGWGYDHFAFSARYAATQPRDYLGMTGKFHTTWGEFGGFKRPAALVYECGGMLAYGAKCS 301 Query: 300 IGDQLHPDGHMDEATYALIGEAYREVESKEAWCTQATNVADIALLSLEAAGVHPQAQTGG 359 IGDQLHP+G M+ TY LIGEAY VE+ E WC VA IA++S E P+A+ Sbjct: 302 IGDQLHPNGEMNPDTYRLIGEAYARVEACEPWCDHVRPVARIAIVSAETN--QPRARGHA 359 Query: 360 RKPPSDAGAARILLEGKFLFDVIDKEHDF------TAYKVLILPDYVAVDEGLRGQLELF 413 +D GAAR+LLE F V+D+ + ++ILPD + +++ + Sbjct: 360 DTSHADEGAARMLLETHLPFVVLDENARWDDRALGLDLDLVILPDTTLLTPATEAKIKKY 419 Query: 414 LQHGGKILATGWSGLDPEGTQFAVDFGARHVEANPYRPDY-FRPAFKPGSLQKASFIFYA 472 L GGK+LA G + LD T FA+D GA V +P PDY A P + + Sbjct: 420 LARGGKVLAAGSALLDTGRTAFAIDPGATLVGRSPSDPDYLLATALTPRVPVTTPIVIHG 479 Query: 473 QGQKIELAGGTE-LGRREDPYFNRDVFTFCSHQHSPSSYTNGGPGMVENSNGIYIAW--- 528 +I+ A GT L R PYFNR FCSHQH+P + P + N +G IAW Sbjct: 480 GAWEIKPARGTRTLVERRTPYFNRTWDHFCSHQHAPDAPALASPAAIVNQDG-NIAWFAH 538 Query: 529 NVFEDYAAKGSLIVKETVLHALNRLLPE-------KTLHTNLPAQGVVTLQEQKEEKRLV 581 ++F Y G + ++ VL A++ LL + + + T LP G V + EQ E+R + Sbjct: 539 DIFTRYRHYGQPLYRDFVLAAIDHLLSDGAEGKDRRPVRTTLPTDGRVNVLEQTRERRYI 598 Query: 582 NHLLYASPVRRG-----------ENIEVIEDIIPLYDVQVSVRTEGRVKNVYLAPQMTPL 630 HLLYA RG +EVIED+IPL +V V++R +VK L P+ L Sbjct: 599 AHLLYAPKSVRGGLSRPGTGGISRQVEVIEDLIPLRNVSVTLRLPRKVKTARLVPEGIDL 658 Query: 631 SFSREEQN---IHYTVPVLECHQMVVLDY 656 + + + + +T+P H MV L Y Sbjct: 659 PLTTQTSDGGTVTFTLPEFTAHAMVELRY 687 >B6YYJ3.1 B6YYJ3_9RHOB Putative uncharacterized protein Length = 698 Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust. Identities = 270/683 (39%), Positives = 381/683 (55%), Gaps = 33/683 (4%) Query: 1 MRFRQVHLDYHTSEAITPIGACFDKKQFQEMLKLGNVDSVTVFSKCHHGWAYHPSEANEI 60 R+RQ+HLD+HTSE I IG+ FD QF E LK G VDSVT+F++CHHGW+Y+P+ + Sbjct: 10 FRYRQIHLDFHTSEHIGGIGSKFDPTQFVETLKHGEVDSVTLFARCHHGWSYYPTNVGKP 69 Query: 61 HPGL-SFDLLGAQIEAAHEINVKTPVYLSAGLDEKLARRHPEW-LIRDENDQTNW----- 113 HP L + DLLG I+A H ++ TP+YL+ DE AR HPEW +++ +N N+ Sbjct: 70 HPELQNADLLGDMIKACHAADIATPIYLTVQWDELTAREHPEWRVMQAQNTAANYPGTEP 129 Query: 114 -VKGFLEPGYHQFCMN-----TPYLDILIAQTREVVSRYDLDGLFFDIVGVRKCYCHSCI 167 L P +H C+N +DI + EV +RY+ LF DI+ +C C++C+ Sbjct: 130 SAMNQLTPTWHTICLNHEGAIQRQIDIAL----EVCARYNPPALFMDILASWECTCNACL 185 Query: 168 ESVRREGGDPRDEQAMRRLWERTYANYTARVKEAAEAIKPGLPIFHNGGHIARGRRDLAF 227 S++ EG DP + +R + R +A P IF N GHI +G+ + Sbjct: 186 SSMKSEGLDPLSADDRKSNDKRVLLRFFERFSQAVNGEFPDTRIFFNSGHIYKGQDERYQ 245 Query: 228 MNDHLELESLPTGGWGYDHFPLSARYAQTLGVQFLGMTGKFHTSWGEFGGYKHPNALRYE 287 HLELESLPTGGWGYDHFP+SARYA TL + +LGMTG+FHT WGEFGG+K +AL YE Sbjct: 246 YYGHLELESLPTGGWGYDHFPVSARYADTLNLPYLGMTGRFHTHWGEFGGFKRADALTYE 305 Query: 288 TALSIANGAGCSIGDQLHPDGHMDEATYALIGEAYREVESKEAWCTQATNVADIALLSLE 347 L ++ GA CSIGDQLHP+GHMD ATY LI AY V++ E + + AT ++A+LS+E Sbjct: 306 CCLMVSLGARCSIGDQLHPNGHMDFATYDLIRPAYSRVKALEPYASNATYQREVAILSVE 365 Query: 348 AAGVHPQAQTGGRKPPSDAGAARILLEGKFLFDVIDKEHDFTAYKVLILPDYVAVDEGLR 407 A + G R PSD+ +AR+LLE + FD+I F YK++ILPD + +++ L Sbjct: 366 AQVSQLGSHLGHRSEPSDSASARMLLEMQIPFDLISSSSSFDDYKLIILPDSIRLNDDLA 425 Query: 408 GQLELFLQHGGKILATGWSGLDPEGTQFAVDFGARHVEA-NPYRPDYFRPAFK-PGSLQK 465 +L+ F GG ILATG SGLD EG ++ +D GA + Y P Y K L Sbjct: 426 VRLKAFTDAGGAILATGESGLDVEGKRYLLDIGAELSDTPMKYDPSYLSCRGKLDDDLVD 485 Query: 466 ASFIFYAQGQKIELAGGTELGRREDPYFNRDVFTFCSHQHSPSSYTNG--GPGMVENSNG 523 AS + Y +G + G L YFNR FCSH H+P GP +++ + Sbjct: 486 ASVVMYEKGASLRATDGDVLADVRPSYFNRTWDKFCSHLHTPEDPDAEPLGPAIMQKGSV 545 Query: 524 IYIAWNVFEDYAAKGSLIVKETVLHALNRLLPEKTLHTNLPAQGVVTLQEQKEEKRLVNH 583 Y+A+ +F Y G + K V +NRL+P + + T LP+ ++L +Q +E+R V H Sbjct: 546 AYVAYPLFRLYGTTGQTLYKYLVRGLINRLMPSQLIGTELPSATRMSLMKQADEQRQVLH 605 Query: 584 LLYASPVRRGEN----------IEVIEDIIPLYDVQVSVRTEGRVKNVYLA--PQMTPLS 631 +LYA RG +E+IED L + + VR + V A + P Sbjct: 606 VLYAPTQLRGSGVPYNDGQTRAVEIIEDAPELKEAKAWVRMDDEPAGVTCAYSGKTLPWQ 665 Query: 632 FSREEQNIHYTVPVLECHQMVVL 654 + ++ +H P L H V+ Sbjct: 666 YDSLDKKLHIVFPSLHIHGAAVI 688 >Q1M4Z1.1 Q1M4Z1_RHIL3 Putative uncharacterized protein Length = 683 Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust. Identities = 286/683 (41%), Positives = 387/683 (56%), Gaps = 38/683 (5%) Query: 1 MRFRQVHLDYHTSEAITPIGACFDKKQFQEMLKLGNVDSVTVFSKCHHGWAYHPSEANEI 60 +R+RQ+HLD+HTSE I IG FD F LK +VDS+T+F+KCHHGW+Y+P++ + Sbjct: 9 LRYRQIHLDFHTSEHIPGIGVDFDPDIFVSTLKAAHVDSITIFAKCHHGWSYYPTKVGKP 68 Query: 61 HPGLSF-DLLGAQIEAAHEINVKTPVYLSAGLDEKLARRHPEWLIRDENDQTNWVK---- 115 HP L+ DLLG ++A ++++P+Y+S DE AR HPEW ++Q + + Sbjct: 69 HPRLARPDLLGDMVKALSAADIESPIYISVQWDELTAREHPEWRAMTASNQYHHDRPDDP 128 Query: 116 ---GFLEPGYHQFCMNTPYL-DILIAQTREVVSRYDLDGLFFDIVGVRKCYCHSCIESVR 171 L P +H C+N L ++ Q REV Y GLFFDI+ C C +CIE ++ Sbjct: 129 SAGKQLSPAWHTLCLNHAGLRKYILDQAREVAQSYPTQGLFFDIILTPDCVCPACIERMQ 188 Query: 172 REGGDPRDEQAMRRLWERTYANYTARVKEAAEAIK---PGLPIFHNGGHIARGRRDLAFM 228 EG DP E + RL N R +E +EA+ P L +F+N GHI + Sbjct: 189 CEGLDP--ENSADRLKNDEAVNEQFR-RETSEALFKEFPNLRVFYNCGHIHKQGPKRFST 245 Query: 229 NDHLELESLPTGGWGYDHFPLSARYAQTLGVQFLGMTGKFHTSWGEFGGYKHPNALRYET 288 HLELESLPTGGWGYDHFP SARYA TLG+ FL TGKFHTSWGEFGG+KHP+AL YE Sbjct: 246 YSHLELESLPTGGWGYDHFPSSARYAATLGMDFLAHTGKFHTSWGEFGGFKHPDALEYEC 305 Query: 289 ALSIANGAGCSIGDQLHPDGHMDEATYALIGEAYREVESKEAWCTQATNVADIALLSLEA 348 A IA G+ C +GDQLHP+G ++ TYA I AYR VE E + A V++IA+LS E Sbjct: 306 AQMIALGSKCLVGDQLHPNGAINPDTYASIAPAYRRVEKLEPFLDGAKQVSEIAILSAEH 365 Query: 349 AGVHPQAQTGGRKPPSDAGAARILLEGKFLFDVIDKEHDFTAYKVLILPDYVAVDEGLRG 408 ++P+ G R PSD GAA++L E K FDV+D F Y++LILPD + VD L Sbjct: 366 --MNPK---GARNHPSDDGAAQMLQELKRPFDVLDSSARFEEYRLLILPDEIPVDAALAA 420 Query: 409 QLELFLQHGGKILATGWSGLDPEGTQFAVDFGA-RHVEANPYRPDYFRPA--FKPGSLQK 465 +L+ +L GGKI+A+ SG+ +G FAVDFG R RP Y + P S+ K Sbjct: 421 RLKAYLAGGGKIIASWHSGIGEDGA-FAVDFGIERQATPIASRPSYVKAGKDLDP-SMPK 478 Query: 466 ASFIFYAQGQKIELAGGTELGRREDPYFNRDVFTFCSHQHSPSSYTNG--GPGMVENSNG 523 +F+FY + + + G T L YFNR FCSHQH+P G + E+ Sbjct: 479 TAFVFYDEAETVRAVGATVLAGIYPSYFNRSYKHFCSHQHAPDDTAADMLGAAVTEHGGI 538 Query: 524 IYIAWNVFEDYAAKGSLIVKETVLHALNRLLPEKTLHTNLPAQGVVTLQEQKEEKRLVNH 583 YIA+ +F Y A G + K V L+RL+P+ + T+LP+ G TL Q R + H Sbjct: 539 AYIAYPIFRLYRAIGQPLYKYVVRGLLDRLVPDPAMVTDLPSSGRATLTRQIGHNRHILH 598 Query: 584 LLYASPVRRGENI----------EVIEDIIPLYDVQVSVRTEGRVKNVYLAPQMTPLSF- 632 LLY P RG+++ E+IEDI + V SVR + K V+ A L++ Sbjct: 599 LLYGPPQIRGKDVRGDDGSRRVMEMIEDIPAIGPVNASVRLPAKPKRVFDAMTGEDLAWE 658 Query: 633 SREEQNIHYTVPVLECHQMVVLD 655 + + I TVP L H VV + Sbjct: 659 AGADGAISITVPRLHIHSAVVFE 681 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.138 0.425 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,293,600,179 Number of extensions: 193082694 Number of successful extensions: 379595 Number of sequences better than 1.0e-05: 26 Number of HSP's gapped: 379508 Number of HSP's successfully gapped: 26 Length of query: 657 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 515 Effective length of database: 1,722,912,073 Effective search space: 887299717595 Effective search space used: 887299717595 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 135 (56.6 bits)