BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0531.0008.p
         (87 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A3DC35.1 A3DC35_CLOTH Cellobiose phosphorylase EC=2.4.1.20            134   3e-30
O66383.1 O66383_CLOTM Cellobiose phosphorylase                        134   3e-30
Q8VP44.1 Q8VP44_CLOTM Cellobiose phosphorylase EC=2.4.1.20            134   3e-30
B4BE25.1 B4BE25_CLOTM Glycosyltransferase 36                          134   3e-30
C5BMK9.1 C5BMK9_9GAMM Cellobiose phosphorylase EC=2.4.1.20            132   1e-29

>A3DC35.1 A3DC35_CLOTH Cellobiose phosphorylase EC=2.4.1.20
          Length = 811

 Score =  134 bits (337), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 59/76 (77%), Positives = 66/76 (86%)

Query: 1  MKFGTFDDTRKEYVINTPKTPYPWINYLGNEQFFGLISNTAGGYTFYRDARMRRLTRYRY 60
          MKFG FDD  KEYVI  P+TPYPWINYLG E FF LISNTAGGY FYRDAR+RR+TRYRY
Sbjct: 1  MKFGFFDDANKEYVITVPRTPYPWINYLGTENFFSLISNTAGGYCFYRDARLRRITRYRY 60

Query: 61 NNIPLDTGGRYYYLYD 76
          NN+P+D GGRY+Y+YD
Sbjct: 61 NNVPIDMGGRYFYIYD 76


>O66383.1 O66383_CLOTM Cellobiose phosphorylase
          Length = 807

 Score =  134 bits (337), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 59/76 (77%), Positives = 66/76 (86%)

Query: 1  MKFGTFDDTRKEYVINTPKTPYPWINYLGNEQFFGLISNTAGGYTFYRDARMRRLTRYRY 60
          MKFG FDD  KEYVI  P+TPYPWINYLG E FF LISNTAGGY FYRDAR+RR+TRYRY
Sbjct: 1  MKFGFFDDANKEYVITVPRTPYPWINYLGTENFFSLISNTAGGYCFYRDARLRRITRYRY 60

Query: 61 NNIPLDTGGRYYYLYD 76
          NN+P+D GGRY+Y+YD
Sbjct: 61 NNVPIDMGGRYFYIYD 76


>Q8VP44.1 Q8VP44_CLOTM Cellobiose phosphorylase EC=2.4.1.20
          Length = 811

 Score =  134 bits (337), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 59/76 (77%), Positives = 66/76 (86%)

Query: 1  MKFGTFDDTRKEYVINTPKTPYPWINYLGNEQFFGLISNTAGGYTFYRDARMRRLTRYRY 60
          MKFG FDD  KEYVI  P+TPYPWINYLG E FF LISNTAGGY FYRDAR+RR+TRYRY
Sbjct: 1  MKFGFFDDANKEYVITVPRTPYPWINYLGTENFFSLISNTAGGYCFYRDARLRRITRYRY 60

Query: 61 NNIPLDTGGRYYYLYD 76
          NN+P+D GGRY+Y+YD
Sbjct: 61 NNVPIDMGGRYFYIYD 76


>B4BE25.1 B4BE25_CLOTM Glycosyltransferase 36
          Length = 811

 Score =  134 bits (337), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 59/76 (77%), Positives = 66/76 (86%)

Query: 1  MKFGTFDDTRKEYVINTPKTPYPWINYLGNEQFFGLISNTAGGYTFYRDARMRRLTRYRY 60
          MKFG FDD  KEYVI  P+TPYPWINYLG E FF LISNTAGGY FYRDAR+RR+TRYRY
Sbjct: 1  MKFGFFDDANKEYVITVPRTPYPWINYLGTENFFSLISNTAGGYCFYRDARLRRITRYRY 60

Query: 61 NNIPLDTGGRYYYLYD 76
          NN+P+D GGRY+Y+YD
Sbjct: 61 NNVPIDMGGRYFYIYD 76


>C5BMK9.1 C5BMK9_9GAMM Cellobiose phosphorylase EC=2.4.1.20
          Length = 812

 Score =  132 bits (332), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 59/76 (77%), Positives = 66/76 (86%)

Query: 1  MKFGTFDDTRKEYVINTPKTPYPWINYLGNEQFFGLISNTAGGYTFYRDARMRRLTRYRY 60
          MKFG FDD  KEYVI  PKTPYPWINYLGNE FF LISNTAGGYTFY+DA+ RRLTRYRY
Sbjct: 1  MKFGHFDDKAKEYVITNPKTPYPWINYLGNEDFFSLISNTAGGYTFYKDAKFRRLTRYRY 60

Query: 61 NNIPLDTGGRYYYLYD 76
          NN+P+D GG+Y+Y+ D
Sbjct: 61 NNVPVDNGGKYFYIND 76


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.323    0.146    0.470 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 640,364,501
Number of extensions: 24487467
Number of successful extensions: 40634
Number of sequences better than 1.0e-05: 134
Number of HSP's gapped: 40681
Number of HSP's successfully gapped: 134
Length of query: 87
Length of database: 3,060,696,203
Length adjustment: 57
Effective length of query: 30
Effective length of database: 2,523,698,348
Effective search space: 75710950440
Effective search space used: 75710950440
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 125 (52.8 bits)