BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0530.0031.p
         (151 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B7GET7.1 B7GET7_ANOFW Transposase                                      82   1e-14
B7DVG6.1 B7DVG6_9BACL Putative uncharacterized protein                 75   1e-12
Q480F7.1 Q480F7_COLP3 ISCps9, transposase orfB                         75   2e-12
B7GF42.1 B7GF42_ANOFW Transposase                                      74   4e-12
B7GJA7.1 B7GJA7_ANOFW Transposase                                      74   4e-12

>B7GET7.1 B7GET7_ANOFW Transposase
          Length = 275

 Score = 82.4 bits (202), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 49/70 (70%)

Query: 82  IEKMCSVLGVSRSGYYKWRATPPSERKKHRERLVQRIEYHFHDNGEIYGSPKITKKLQQE 141
           +EKMC VL VSRSGYYKWR  P S R++ RE L Q +   + ++ ++YGSPK+TKKL  E
Sbjct: 1   MEKMCEVLKVSRSGYYKWRDRPKSARQERREELTQEVRRVYIESRQLYGSPKVTKKLNHE 60

Query: 142 GFTVGEKTVG 151
           G  V +KTV 
Sbjct: 61  GIKVSQKTVS 70


>B7DVG6.1 B7DVG6_9BACL Putative uncharacterized protein
          Length = 211

 Score = 75.5 bits (184), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 55/82 (67%)

Query: 70  FQFIEEHRSVFRIEKMCSVLGVSRSGYYKWRATPPSERKKHRERLVQRIEYHFHDNGEIY 129
           + +I +HRS F ++KMC VLGVSRSGYY WR  P S R K R R ++RI   F  +  +Y
Sbjct: 2   YAWIHKHRSEFPVQKMCKVLGVSRSGYYAWRGRPESLRSKRRRRRIRRIHELFLQSRRLY 61

Query: 130 GSPKITKKLQQEGFTVGEKTVG 151
           GSPKIT  L+++G  + +KTV 
Sbjct: 62  GSPKITALLRRDGERIAQKTVA 83


>Q480F7.1 Q480F7_COLP3 ISCps9, transposase orfB
          Length = 295

 Score = 74.7 bits (182), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 52/86 (60%)

Query: 66  PGLKFQFIEEHRSVFRIEKMCSVLGVSRSGYYKWRATPPSERKKHRERLVQRIEYHFHDN 125
           P  +F FIE+H+    ++ +CS L VSRSG+Y WR  P S R  +   L+  I+  F++N
Sbjct: 9   PSERFGFIEKHKEALGVKYLCSWLDVSRSGFYAWRRRPRSMRAINDADLLLNIKQVFNNN 68

Query: 126 GEIYGSPKITKKLQQEGFTVGEKTVG 151
            + YGSP++   L++EG T  EK V 
Sbjct: 69  HQTYGSPRVFHALKREGITTSEKRVA 94


>B7GF42.1 B7GF42_ANOFW Transposase
          Length = 276

 Score = 74.3 bits (181), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 49/70 (70%)

Query: 82  IEKMCSVLGVSRSGYYKWRATPPSERKKHRERLVQRIEYHFHDNGEIYGSPKITKKLQQE 141
           + KMC VLGVSRSGYY W   P S++KK +E L ++I+    ++ E YGSPKITK LQ++
Sbjct: 1   MAKMCEVLGVSRSGYYAWAKRPESQQKKRQEALKKQIKKIHIESRETYGSPKITKILQKQ 60

Query: 142 GFTVGEKTVG 151
           G  V +KTV 
Sbjct: 61  GVKVSQKTVA 70


>B7GJA7.1 B7GJA7_ANOFW Transposase
          Length = 174

 Score = 73.9 bits (180), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 49/70 (70%)

Query: 82  IEKMCSVLGVSRSGYYKWRATPPSERKKHRERLVQRIEYHFHDNGEIYGSPKITKKLQQE 141
           + KMC VLGVSRSGYY W   P S++KK +E L ++I+    ++ E YGSPKITK LQ++
Sbjct: 1   MAKMCEVLGVSRSGYYAWAKRPESQQKKRQEALKKQIKKIHIESRETYGSPKITKILQKQ 60

Query: 142 GFTVGEKTVG 151
           G  V +KTV 
Sbjct: 61  GVKVSQKTVA 70


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.318    0.136    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 955,095,480
Number of extensions: 37498931
Number of successful extensions: 88782
Number of sequences better than 1.0e-05: 438
Number of HSP's gapped: 88978
Number of HSP's successfully gapped: 438
Length of query: 151
Length of database: 3,060,696,203
Length adjustment: 113
Effective length of query: 38
Effective length of database: 1,996,121,508
Effective search space: 75852617304
Effective search space used: 75852617304
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 125 (52.8 bits)