BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0530.0020.p (573 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0FIP1.1 C0FIP1_9CLOT Putative uncharacterized protein 809 0.0 A5WXY0.1 A5WXY0_9RHIZ AgaG 444 e-122 A8IE60.1 A8IE60_AZOC5 Putative AgaG protein 442 e-122 A8U3L3.1 A8U3L3_9PROT N-methylhydantoinase (ATP-hydrolyzing) B 1 438 e-121 O50266.1 O50266_9RHIZ AgaG 437 e-120 >C0FIP1.1 C0FIP1_9CLOT Putative uncharacterized protein Length = 570 Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/567 (67%), Positives = 461/567 (81%) Query: 5 KVDAVTVEIVGNLLLTIAEEIGISIIKSAYSSNIKERRDISAAVFDPEGNLVAQAEHVPM 64 +VDAVTVEIVGNLLL+IAEE+G+++IKSAYS+NIKERRDIS AVFDPEGN+VAQAEHV M Sbjct: 4 RVDAVTVEIVGNLLLSIAEEMGVALIKSAYSTNIKERRDISTAVFDPEGNMVAQAEHVAM 63 Query: 65 HLGSLLSIVKEVYNKYPPEAIQRGDMFIGNDPYNGGGTHLPDITIVAPVFAGERLIGWVA 124 HLGSLL I+KEVY K+P I GDMF+GNDPYNGGGTHLPDIT+ PVFAGE LIGWVA Sbjct: 64 HLGSLLGIIKEVYRKHPISEIHPGDMFMGNDPYNGGGTHLPDITVAQPVFAGETLIGWVA 123 Query: 125 NLAHHSDVGGKVPGSTSGDAVSIYQEGIKIPISKICRQDEVNEEIVDFIMTNSRIPEERY 184 NLAHHSDVGGKV GSTSGDAVSI+QEG+KIP+ ++C + +V E+IV F++ NSRIP ER Sbjct: 124 NLAHHSDVGGKVAGSTSGDAVSIFQEGLKIPLVRVCEKGKVKEDIVSFLLANSRIPGERQ 183 Query: 185 GDLHAQMASNRVGVRRLLEAYEQYGETLVLSMAQLQNYAERRLRAGIEKLQDGEYSFTDY 244 GDL AQ+ASNRVG RRLLEA+++Y L+ SM +LQ+YAERRLRAGI+ L DGEY FTDY Sbjct: 184 GDLQAQIASNRVGARRLLEAFDRYHTLLIDSMHELQDYAERRLRAGIKALPDGEYEFTDY 243 Query: 245 MDDAGAASPDPIKLTVKITIQGDAMELDFAGSQPQVNGPINVTYNGLLATVFYSIKALID 304 MDDAG P PIK+ VKI+I+ D M LDF G+ PQVNGP NVT NGLLATVFY +KALID Sbjct: 244 MDDAGINHPSPIKIHVKISIKDDFMYLDFTGTDPQVNGPNNVTKNGLLATVFYCLKALID 303 Query: 305 PDIYSNAGIYRAFTIKAEPGLIINARNPAPVGARIDTCMRVSDVIFGAMAPLVPDRAIAG 364 P+I SNAGIYRAF ++AE G I+NA NPAPVGARIDTCMRV+DVIFGA+ P VP+RA+AG Sbjct: 304 PEIPSNAGIYRAFQVEAEEGSIVNAVNPAPVGARIDTCMRVADVIFGALGPAVPERAMAG 363 Query: 365 CNSSCTTAVFSGYDPRDPDQFYVYLETIXXXXXXXXXXDGLNGVQVHLTNTSNLPIEALE 424 CNSSCT+A+FSG DP+D FYVYLETI DGL+GVQVH+TNTSNLP+EALE Sbjct: 364 CNSSCTSAIFSGADPQDSSHFYVYLETIAGGSGAQKGRDGLSGVQVHMTNTSNLPVEALE 423 Query: 425 MEFPLVIVREYSLIEDSGGAGEYRGGLGIRREFESRFDQVTFTGLGDRQKFLPWXXXXXX 484 MEFPL+ V +Y LIE+SGGAG+YRGGLGI R FE+ +D ++FTGLGDRQ + PW Sbjct: 424 MEFPLLTVHKYGLIENSGGAGQYRGGLGIERIFEAMYDNISFTGLGDRQLYRPWGLYGGL 483 Query: 485 XXXXXVYQLKRADNSVERLPSKCTEIVLNRGDRIVIHTPGAGGYGNPADRDPSLVLKDVI 544 Y + RAD +VE+L SKCT+I L++GD + +HTPGAGGYG+P RDP VL+D I Sbjct: 484 PGAGGEYFITRADGTVEKLMSKCTDIPLHKGDTVTVHTPGAGGYGDPKKRDPKAVLRDCI 543 Query: 545 EKKISIRQAKEKYGLPIIQTPQGYQIA 571 E K+S+ QA+ KYG+ +I+ Y++A Sbjct: 544 EHKVSVDQAESKYGVRVIREGNQYRLA 570 >A5WXY0.1 A5WXY0_9RHIZ AgaG Length = 553 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 240/563 (42%), Positives = 344/563 (61%), Gaps = 21/563 (3%) Query: 5 KVDAVTVEIVGNLLLTIAEEIGISIIKSAYSSNIKERRDISAAVFDPEGNLVAQAEHVPM 64 K+D +TVE++G+ L +I EE+G ++++++YS+NIKERRD S A+FD GN + QAEH+PM Sbjct: 3 KIDPITVEVIGSALTSIVEEMGEALVRASYSTNIKERRDCSTALFDWRGNTLCQAEHIPM 62 Query: 65 HLGSLLSIVKEVYNKYPPEAIQRGDMFIGNDPYNGGGTHLPDITIVAPVFAGERLIGWVA 124 HLGS + I+ + +Y E I+ GD+FIGND Y GG THLPDI + P+F + ++GW Sbjct: 63 HLGSFIGIIPHINKRYAAEDIKPGDVFIGNDAYEGGATHLPDIVLAEPIFHEDTMVGWAV 122 Query: 125 NLAHHSDVGGKVPGSTSGDAVSIYQEGIKIPISKICRQDEVNEEIVDFIMTNSRIPEERY 184 N AHH+D + G A IYQEGI+IP ++ R+ ++ +++ D + N ++P ER Sbjct: 123 NTAHHADFADR------GHA-HIYQEGIRIPPVRLYREGKLQQDLQDMFLLNCQVPHERI 175 Query: 185 GDLHAQMASNRVGVRRLLEAYEQYGETLVLSMAQ-LQNYAERRLRAGIEKLQDGEYSFTD 243 DL AQM++NR+ V+R+ + +YG+ VL LQ+YAER++RAGI + DG YSFTD Sbjct: 176 SDLRAQMSANRLCVQRMQDLCAKYGKDKVLEAGDALQDYAERKMRAGIAAIPDGTYSFTD 235 Query: 244 YMDDAGAASPDPIKLTVKITIQGDAMELDFAGSQPQVNGPINVTYNGLLATVFYSIKALI 303 Y D PD ++L V ITI+GDAM L F + PQV+ +NV Y LLAT +Y++KA+I Sbjct: 236 YFDS--NQFPDVMELKVAITIKGDAMHLAF-DAPPQVSAGLNVIYTALLATCYYAVKAVI 292 Query: 304 DPDIYSNAGIYRAFTIKAEPGLIINARNPAPVGARIDTCMRVSDVIFGAMAPLVPDRAIA 363 DP I NAG+ R T++A G ++N ++PA V RI C RV+D++ GA+A +PD+ A Sbjct: 293 DPTILPNAGLSRPITVEAPHGSLLNCKHPAAVDGRISACQRVADLVQGALAKALPDKVTA 352 Query: 364 GCNSSCTTAVFSGYDPRDPDQFYVYLETIXXXXXXXXXXDGLNGVQVHLTNTSNLPIEAL 423 N +CT A F+G R+ +VYLETI DGL+G+ VH+TNTSNLP+EAL Sbjct: 353 AGNGACTGATFTG--SREDGSLWVYLETIGGGGGARPTADGLSGIHVHMTNTSNLPVEAL 410 Query: 424 EMEFPLVIVREYSLIEDSGGAGEYRGGLGIRREFESRFDQVTFTGLGDRQKFLPWXXXXX 483 E+E+PL ++R Y L S GAG +RGG+G+RR + D G R PW Sbjct: 411 ELEYPLTLLR-YELANGSAGAGTWRGGMGMRRVYRIEADCRCAVD-GARFTVHPWGLAGG 468 Query: 484 XXXXXXVYQLKRADNSVERLPSKCTEIVLNRGDRIVIHTPGAGGYGNPADRDPSLVLKDV 543 + N LP + L G I I TPG GGYG P+ R + +D+ Sbjct: 469 LDAAGSDFNFG---NGEHNLPGT---VQLRAGQIIEIVTPGGGGYGAPSGRSLDAIERDI 522 Query: 544 IEKKISIRQAKEKYGLPIIQTPQ 566 E++I+ A+ YG + Q Sbjct: 523 KEERITADFAESVYGYRATKNTQ 545 >A8IE60.1 A8IE60_AZOC5 Putative AgaG protein Length = 550 Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust. Identities = 239/560 (42%), Positives = 337/560 (60%), Gaps = 32/560 (5%) Query: 6 VDAVTVEIVGNLLLTIAEEIGISIIKSAYSSNIKERRDISAAVFDPEGNLVAQAEHVPMH 65 +D +TVE++G L +I EE G ++I+++YS+NIKERRD S A+FD GN + QAEH+P+H Sbjct: 15 LDPITVEVIGAALSSIVEETGEALIRASYSTNIKERRDCSTALFDAAGNTLCQAEHIPIH 74 Query: 66 LGSLLSIVKEVYNKYPPEAIQRGDMFIGNDPYNGGGTHLPDITIVAPVFAGERLIGWVAN 125 LGS + IV + +P ++ GD+F+GND Y GGGTHLPDI + P+F + W N Sbjct: 75 LGSFIGIVPHILKLHPTSEMKPGDVFVGNDAYAGGGTHLPDIVLAEPIFIDGAIAAWTVN 134 Query: 126 LAHHSDVGGKVPGSTSGDAVSIYQEGIKIPISKICRQDEVNEEIVDFIMTNSRIPEERYG 185 LAHHSD + G A IYQEG++IP ++ R E+N+++ D I+ N ++P ER Sbjct: 135 LAHHSDFADR------GHA-HIYQEGLRIPPVRLYRAGELNKDVQDLILLNCQVPHERLS 187 Query: 186 DLHAQMASNRVGVRRLLEAYEQYGETLVLSMAQ-LQNYAERRLRAGIEKLQDGEYSFTDY 244 DL AQMA+NRVGV+R +YG +VL+ L +YAERR+RAGI + DG Y F D Sbjct: 188 DLRAQMAANRVGVQRFQALCAKYGTQVVLAAGDALMDYAERRMRAGIAAIPDGTYRFADV 247 Query: 245 MDDAGAASPDPIKLTVKITIQGDAMELDFAGSQPQVNGPINVTYNGLLATVFYSIKALID 304 D+ + P L+V++T++GDAM L F + Q+ IN+T+ L AT +Y +K+++D Sbjct: 248 FDNPEIDTTLP--LSVEVTVKGDAMTLHF-DAPDQLRAGINMTHTALQATAYYVVKSVVD 304 Query: 305 PDIYSNAGIYRAFTIKAEPGLIINARNPAPVGARIDTCMRVSDVIFGAMAPLVPDRAIAG 364 P I NAG+ R T+ A G +++ +PA V R+ TC RVSD+I GA+A VP + A Sbjct: 305 PTILPNAGLARPLTVTARQGSVVSCVHPAAVNGRVQTCQRVSDLILGALAQAVPHKVTAC 364 Query: 365 CNSSCTTAVFSGYDPRDPDQFYVYLETIXXXXXXXXXXDGLNGVQVHLTNTSNLPIEALE 424 NS+CT A F G +D +VYLET+ DGL+GV VH+TNTSNLPIEALE Sbjct: 365 SNSACTVATFIG-QRKDTGAIWVYLETMGGGGGARHDKDGLDGVHVHVTNTSNLPIEALE 423 Query: 425 MEFPLVIVREYSLIEDSGGAGEYRGGLGIRREFESRFD---QVTFTGLGDRQKFLPWXXX 481 E+PL ++R Y L++ SGG G YRGGLG+RR + + D +V + + R W Sbjct: 424 TEYPLTLLR-YELVDGSGGVGRYRGGLGLRRVYRADEDCRVRVDVSRIHSRS----WGLD 478 Query: 482 XXXXXXXXVYQLKRADNSVERLPSKCTE---IVLNRGDRIVIHTPGAGGYGNPADRDPSL 538 + VE P E + L G + +PGAGGYG PA+RD + Sbjct: 479 G---------GGAGGNGGVECGPGVLRERDALTLKAGQWFAVVSPGAGGYGAPAERDRAA 529 Query: 539 VLKDVIEKKISIRQAKEKYG 558 V +D+ E I + A+E YG Sbjct: 530 VTRDIEEGVIDLPTAREIYG 549 >A8U3L3.1 A8U3L3_9PROT N-methylhydantoinase (ATP-hydrolyzing) B 1 Length = 550 Score = 438 bits (1127), Expect = e-121, Method: Compositional matrix adjust. Identities = 236/560 (42%), Positives = 335/560 (59%), Gaps = 26/560 (4%) Query: 6 VDAVTVEIVGNLLLTIAEEIGISIIKSAYSSNIKERRDISAAVFDPEGNLVAQAEHVPMH 65 +D +TVE++G L +I EE G ++++++YS+NIKERRD S A+FD +G + QAEH+P+H Sbjct: 13 LDPITVEVIGAALESIVEETGEALVRASYSTNIKERRDCSTALFDTQGRTLCQAEHIPIH 72 Query: 66 LGSLLSIVKEVYNKYPPEAIQRGDMFIGNDPYNGGGTHLPDITIVAPVFAGERLIGWVAN 125 LGS + +V ++ + +Q GD+F+GND Y GGGTHLPDI + P+F R+ W N Sbjct: 73 LGSFIGVVPKILEMHKVADMQPGDVFVGNDAYVGGGTHLPDIVLAEPIFVEGRITAWTVN 132 Query: 126 LAHHSDVGGKVPGSTSGDAVSIYQEGIKIPISKICRQDEVNEEIVDFIMTNSRIPEERYG 185 LAHH+D + G A IYQEG++IP ++ R E+ ++I+D I+ N ++P ER Sbjct: 133 LAHHADFADR------GHA-HIYQEGLRIPPVRLYRAGELQKDILDLILLNCQVPRERLS 185 Query: 186 DLHAQMASNRVGVRRLLEAYEQYGETLVLSMA-QLQNYAERRLRAGIEKLQDGEYSFTDY 244 DL AQMA+NR+GV+R +YG +VLS L +YAER++RAGI L DG Y+F D Sbjct: 186 DLRAQMAANRLGVQRFQALCAKYGTDIVLSAGIALLDYAERKMRAGIATLPDGVYAFADV 245 Query: 245 MDDAGAASPDPIKLTVKITIQGDAMELDFAGSQPQVNGPINVTYNGLLATVFYSIKALID 304 ++ P+ +V+ITI GD M L F S PQV IN+TY LLAT +Y +K+++D Sbjct: 246 FENPEIHGELPV--SVEITIAGDEMRLHFE-SPPQVRAGINMTYTALLATAYYIVKSVVD 302 Query: 305 PDIYSNAGIYRAFTIKAEPGLIINARNPAPVGARIDTCMRVSDVIFGAMAPLVPDRAIAG 364 P I NAG+ R T+ A G ++N +PA V R+ TC R+SDVI GA+A PDR A Sbjct: 303 PTILPNAGLARPLTVTAPEGTLLNCVHPAAVNGRVQTCQRMSDVILGALAKAAPDRVTAC 362 Query: 365 CNSSCTTAVFSGYDPRDPDQFYVYLETIXXXXXXXXXXDGLNGVQVHLTNTSNLPIEALE 424 NS+CT A F G D +VYLET+ DGL+GV VH+TNTSNLP+EALE Sbjct: 363 SNSACTVATFVGQRKSD-GSIWVYLETMGGGAGARPTKDGLDGVHVHVTNTSNLPLEALE 421 Query: 425 MEFPLVIVREYSLIEDSGGAGEYRGGLGIRREFESRFDQVTFTGLGDRQKFLPWXXXXXX 484 E+PL ++R Y LI+ SGG G +RGG+G+RR + + D + R + W Sbjct: 422 QEYPLTLLR-YELIDGSGGVGTFRGGMGLRRTYRADEDCRVRVDI-SRLRSRSWGLLGGG 479 Query: 485 XXXXXVYQLKRADNSVERLPS---KCTEIVLNRGDRIVIHTPGAGGYGNPADRDPSLVLK 541 + A+ ++ P + + L G + TPGAGGYG P R V + Sbjct: 480 ---------EGANGAIVCGPGVTFQRDQATLKAGQWFEVVTPGAGGYGAPEQRSKGAVER 530 Query: 542 DVIEKKISIRQAKEKYGLPI 561 D+ E I + A++ YG+ I Sbjct: 531 DLTESVIDVVTARDVYGVQI 550 >O50266.1 O50266_9RHIZ AgaG Length = 550 Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust. Identities = 239/555 (43%), Positives = 343/555 (61%), Gaps = 21/555 (3%) Query: 5 KVDAVTVEIVGNLLLTIAEEIGISIIKSAYSSNIKERRDISAAVFDPEGNLVAQAEHVPM 64 K+D +TVE++G+ L +I EE+G ++++++YS+NIKERRD S A+FD GN + QAEH+PM Sbjct: 3 KIDPITVEVIGSALTSIVEEMGEALVRASYSTNIKERRDCSTALFDWRGNTLCQAEHIPM 62 Query: 65 HLGSLLSIVKEVYNKYPPEAIQRGDMFIGNDPYNGGGTHLPDITIVAPVFAGERLIGWVA 124 HLGS + I+ + +Y E I+ GD+FIGND Y GG THLPDI + P+F GE ++GW Sbjct: 63 HLGSFIGIIPHINKRYAAEDIKPGDVFIGNDAYEGGATHLPDIVLAEPIFHGETMVGWAV 122 Query: 125 NLAHHSDVGGKVPGSTSGDAVSIYQEGIKIPISKICRQDEVNEEIVDFIMTNSRIPEERY 184 N AHH+D + G A IYQEGI++P ++ R+ E+ +++ D + N ++P ER Sbjct: 123 NTAHHADFADR------GHA-HIYQEGIRLPPVRLYRKGELQQDLQDVFLLNCQVPHERL 175 Query: 185 GDLHAQMASNRVGVRRLLEAYEQYGETLVLSMAQ-LQNYAERRLRAGIEKLQDGEYSFTD 243 DL AQM++NR+ V+R+ + +YG VL+ LQ+YAER++RAGI + DG YSFTD Sbjct: 176 SDLRAQMSANRLCVQRMQDLCSKYGADKVLAAGDALQDYAERKMRAGIAAIPDGVYSFTD 235 Query: 244 YMDDAGAASPDPIKLTVKITIQGDAMELDFAGSQPQVNGPINVTYNGLLATVFYSIKALI 303 Y D + + ++L V ITI+GDAM + F + PQV +NV Y LLAT +Y++KA+I Sbjct: 236 YFDSNQFS--EIMELNVDITIKGDAMHIAF-NAPPQVPAGLNVIYTALLATCYYAVKAVI 292 Query: 304 DPDIYSNAGIYRAFTIKAEPGLIINARNPAPVGARIDTCMRVSDVIFGAMAPLVPDRAIA 363 DP I NAG+ R T++A G ++N ++PA V RI C RV+D++ GA+A P++ A Sbjct: 293 DPTILPNAGLSRPITVEAPHGSLLNCKHPAAVDGRISACQRVADLVQGALAKAWPEKVTA 352 Query: 364 GCNSSCTTAVFSGYDPRDPDQFYVYLETIXXXXXXXXXXDGLNGVQVHLTNTSNLPIEAL 423 N +CT A F+G RD +VYLETI DGL+G+ VH+TNTSNLP+EAL Sbjct: 353 AGNGACTGATFTG--TRDDGSLWVYLETIGGGGGARPTADGLSGIHVHMTNTSNLPVEAL 410 Query: 424 EMEFPLVIVREYSLIEDSGGAGEYRGGLGIRREFESRFDQVTFTGLGDRQKFLPWXXXXX 483 E+E+PL ++R Y L DS GAG +RGG+G+RR + D G R PW Sbjct: 411 ELEYPLTLLR-YELANDSAGAGTWRGGMGLRRVYRIEADCRCAID-GARFSIYPWGLQGG 468 Query: 484 XXXXXXVYQLKRADNSVERLPSKCTEIVLNRGDRIVIHTPGAGGYGNPADRDPSLVLKDV 543 + N LP + L G I I TPG GGYG+P+ R + +D+ Sbjct: 469 LEATGSDFNFG---NGQHNLPGI---VQLRAGQIIEIVTPGGGGYGSPSGRSLDAISRDI 522 Query: 544 IEKKISIRQAKEKYG 558 E++I+ A+ YG Sbjct: 523 KEERITTDYAERVYG 537 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.138 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,445,494,423 Number of extensions: 150230531 Number of successful extensions: 328872 Number of sequences better than 1.0e-05: 708 Number of HSP's gapped: 324485 Number of HSP's successfully gapped: 715 Length of query: 573 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 432 Effective length of database: 1,732,333,088 Effective search space: 748367894016 Effective search space used: 748367894016 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 134 (56.2 bits)