BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0530.0018.p (307 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0FIN9.1 C0FIN9_9CLOT Putative uncharacterized protein 276 2e-72 A6M2S5.1 A6M2S5_CLOB8 PfkB domain protein 236 2e-60 Q97DH9.1 Q97DH9_CLOAB Sugar kinase, ribokinase family 213 1e-53 A9MLL0.1 A9MLL0_SALAR Putative uncharacterized protein 209 2e-52 B4SWE8.1 B4SWE8_SALNS PfkB domain protein 207 1e-51 >C0FIN9.1 C0FIN9_9CLOT Putative uncharacterized protein Length = 285 Score = 276 bits (705), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 140/259 (54%), Positives = 176/259 (67%), Gaps = 12/259 (4%) Query: 2 VKVIGIGDNVGDIYLDSYEMFPGGQALNFSVYAKRLGAESAYIGVFGDDAVARHIAGTLD 61 ++VIGIGDNV D Y+ MFPGGQALNF+VY K LGA+S+Y+G FG D VA HI TLD Sbjct: 1 MRVIGIGDNVCDKYIYLNTMFPGGQALNFAVYTKMLGADSSYMGTFGRDEVAEHILATLD 60 Query: 62 EVGVDRSHCRHVQGENGYALVELVDGDRVFLGSNRGGVLKDKPIILDSRDESYIRQFDLV 121 E+GV CR GENGYA V LVDGDRVFLGSN+GG+ K+ P++LDS D Y++QF + Sbjct: 61 ELGVKHERCRQYDGENGYARVTLVDGDRVFLGSNKGGIAKEHPVVLDSDDMEYVKQFSHI 120 Query: 122 HTSNNSYFNEQLSKVHKLGVAISYDFSKSWSNWRDVEQIAPHLDYGFLSCSSDMTDEEAG 181 HTSNNSYF+ QL K+ + G+++SYDFS W++ V ++AP++ Y FLSC S + EEA Sbjct: 121 HTSNNSYFDSQLPKLAEAGLSVSYDFSGQWTDPEKVARVAPYIRYAFLSCGS-IPVEEAE 179 Query: 182 GTCRKXXXXVHALGCRSVVATLGSRGAWFYDGELRLFQASQYVDPVDTLGAGDSFAAAFL 241 CR +H GC V+ T GS G+ YDG Q Q V+ VDTLGAGDSFAAAFL Sbjct: 180 KICR----AIHEAGCPMVITTRGSYGSMLYDGNRFYEQKPQLVEAVDTLGAGDSFAAAFL 235 Query: 242 VDYL-------RQNKLDQG 253 + Y+ Q + DQG Sbjct: 236 LSYIGSLEDKKAQGRADQG 254 >A6M2S5.1 A6M2S5_CLOB8 PfkB domain protein Length = 280 Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 130/293 (44%), Positives = 169/293 (57%), Gaps = 13/293 (4%) Query: 1 MVKVIGIGDNVGDIYLDSYEMFPGGQALNFSVYAKRLGAESAYIGVFGDDAVARHIAGTL 60 MVKVIG+GDNV D Y M+PGG ALNF+ YAK++G SA++G FG DA A H+ T+ Sbjct: 1 MVKVIGLGDNVVDKYEHIRTMYPGGNALNFAAYAKKIGINSAFLGAFGSDAEADHVQNTI 60 Query: 61 DEVGVDRSHCRHVQGENGYALVELVDGDRVFLGSNRGGVLKDKPIILDSRDESYIRQFDL 120 E+G+D S CRH GENG A V L DGDRVFLGSN GGVL++ + L D YI+ FDL Sbjct: 61 HELGLDISKCRHFNGENGCARVTLEDGDRVFLGSNEGGVLRENGLNLTQDDLEYIKTFDL 120 Query: 121 VHTSNNSYFNEQLSKVHKLGVAISYDFSKSWSNWRDVEQIAPHLDYGFLSCSSDMTDEEA 180 +H Y +L K+ L + IS+DFS ++ +VE+IAP +D+ F SCS TDE Sbjct: 121 LHAGLYGYTEPELDKIRALSIPISFDFSDDFT-IEEVERIAPKVDFSFFSCSHLKTDEML 179 Query: 181 GGTCRKXXXXVHALGCRSVVATLGSRGAWFYDGELRLFQASQYVDPVDTLGAGDSFAAAF 240 + H LG VV T+G +GA YDG Q + V+ VDT+GAGDSF AF Sbjct: 180 NLVMK-----AHKLGSEIVVVTMGEKGALLYDGTKFYSQEPELVEAVDTMGAGDSFITAF 234 Query: 241 LVDYLRQNKLDQGLMNTSTHDREEXXXXXXXXXXXXXXXXXXERGAFGYGKKY 293 L++Y+ + K ++ RE G+FGYGKKY Sbjct: 235 LINYISKIKENELY-------RENIIKESLNEGAIFSAKTCLVEGSFGYGKKY 280 >Q97DH9.1 Q97DH9_CLOAB Sugar kinase, ribokinase family Length = 295 Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 116/293 (39%), Positives = 169/293 (57%), Gaps = 8/293 (2%) Query: 3 KVIGIGDNVGDIYLDSYEMFPGGQALNFSVYAKRLGAESAYIGVFGDDAVARHIAGTLDE 62 K++ IGDNV D YL +M+PGGQ +N VY K GAE+AYIG +G+D VA + TL E Sbjct: 5 KIVAIGDNVCDKYLSRGKMYPGGQCINTCVYGKMNGAETAYIGKYGNDEVAECVQNTLKE 64 Query: 63 VGVDRSHCRHVQGENGYALVELVDGDRVFLGSNRGGVLKDKPIILDSRDESYIRQFDLVH 122 +G+D SHCRH +GENG+ALV L + DRVFLGSN+GG+ K+ D D YI++FDL++ Sbjct: 65 IGIDDSHCRHYEGENGFALVTLKNADRVFLGSNKGGIAKEHSYNFDENDFEYIKKFDLIY 124 Query: 123 TSNNSYFNEQLSKVHKLGVAISYDFSKSWSNWRDVEQIAPHLDYGFLSCSSDMTDEEAGG 182 T+ NSY + L ++H GV I+YDFS W++ + ++ P++D LSC+ +T EE Sbjct: 125 TNLNSYIEDNLKELHATGVPIAYDFSMRWTD-EYLLKVCPYIDVAILSCAH-LTAEER-- 180 Query: 183 TCRKXXXXVHALGCRSVVATLGSRGAW-FYDGELRLFQASQYVDPVDTLGAGDSFAAAFL 241 K V G + V+ T+G G++ Y+G+ A + +DT+GAGDS+ + FL Sbjct: 181 --EKEMKKVQNYGVKIVLGTIGEDGSYVLYNGDFLYTSAIMAANIIDTMGAGDSYFSTFL 238 Query: 242 VDYLRQNKLDQGLMNTSTHDREEXXXXXXXXXXXXXXXXXXERGAFGYGKKYQ 294 L+ ++ + + T + E GAFGYG Q Sbjct: 239 CSLLQTSETGKLVEGTKESMKIRLESAMKSGAIFAANVCGME-GAFGYGVPIQ 290 >A9MLL0.1 A9MLL0_SALAR Putative uncharacterized protein Length = 281 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 160/292 (54%), Gaps = 15/292 (5%) Query: 2 VKVIGIGDNVGDIYLDSYEMFPGGQALNFSVYAKRLGAESAYIGVFGDDAVARHIAGTLD 61 + V+GIGDNV D YL S M+PGG ALNFSVYAK SA++G FG+D ARH+ L Sbjct: 3 ISVLGIGDNVVDKYLHSGIMYPGGNALNFSVYAKLADIPSAFMGAFGNDDAARHVQDVLR 62 Query: 62 EVGVDRSHCRHVQGENGYALVELVDGDRVFLGSNRGGVLKDKPIILDSRDESYIRQFDLV 121 ++ +D SHCRH GENGYA + L GDR F+ SN+ GVL++ P L D YI QF LV Sbjct: 63 QLQIDISHCRHYTGENGYACIRLTHGDRQFVASNKNGVLREHPFSLSDVDLRYISQFTLV 122 Query: 122 HTSNNSYFNEQLSKVHKLGVAISYDFSKSWSNWRDVEQIAPHLDYGFLSCSSDMTDEEAG 181 H+S N + +L K+ + V +S+DFS ++ E++ P +DYGF+SCS DE Sbjct: 123 HSSINGHLESELEKIKQQTVLLSFDFSGRGTD-EYFEKVCPWVDYGFISCSGLSPDE--- 178 Query: 182 GTCRKXXXXVHALGCRSVVATLGSRGAWFYDGELRLFQASQYVDPVDTLGAGDSFAAAFL 241 + ++ GCR ++AT G +++ G L Y++P+DTLGAGD+F FL Sbjct: 179 --IKIKLNKLYRYGCRHIIATCGHEKVYYFSGADYLEWQPVYIEPIDTLGAGDAFLTGFL 236 Query: 242 VDYLRQNKLDQGLMNTSTHDREEXXXXXXXXXXXXXXXXXXERGAFGYGKKY 293 + L+ + +E GAFG+GK + Sbjct: 237 LSILQSGMAEP---------DKESVLRAMRQGGKSAAQVLSHYGAFGFGKPF 279 >B4SWE8.1 B4SWE8_SALNS PfkB domain protein Length = 281 Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 114/292 (39%), Positives = 160/292 (54%), Gaps = 15/292 (5%) Query: 2 VKVIGIGDNVGDIYLDSYEMFPGGQALNFSVYAKRLGAESAYIGVFGDDAVARHIAGTLD 61 + V+GIGDNV D YL S M+PGG ALNF+VYAK G SA++G FG+D A+H+ L Sbjct: 3 ISVLGIGDNVVDKYLHSGIMYPGGNALNFAVYAKLAGIPSAFMGAFGNDDAAQHVQNVLH 62 Query: 62 EVGVDRSHCRHVQGENGYALVELVDGDRVFLGSNRGGVLKDKPIILDSRDESYIRQFDLV 121 ++ +D SH RH GENGYA + L GDR F+ SN+ GVL++ P L D YI QF LV Sbjct: 63 QLQIDISHSRHYTGENGYACIRLSHGDRQFVASNKNGVLREHPFSLSDDDLRYISQFTLV 122 Query: 122 HTSNNSYFNEQLSKVHKLGVAISYDFSKSWSNWRDVEQIAPHLDYGFLSCSSDMTDEEAG 181 H+S N + +L K+ + V +S+DFS +N E++ P +DYGF+SCS DE Sbjct: 123 HSSINGHLESELEKIKQQTVLLSFDFSGRGTN-DYFEKVCPWVDYGFVSCSGLSPDE--- 178 Query: 182 GTCRKXXXXVHALGCRSVVATLGSRGAWFYDGELRLFQASQYVDPVDTLGAGDSFAAAFL 241 + ++ GCR ++AT G +++ G L Y++PVDTLGAGD+F FL Sbjct: 179 --IKIKLNKLYRYGCRHIIATCGHEKVYYFSGADYLEWQPVYIEPVDTLGAGDAFLTGFL 236 Query: 242 VDYLRQNKLDQGLMNTSTHDREEXXXXXXXXXXXXXXXXXXERGAFGYGKKY 293 + L+ + +E GAFG+GK + Sbjct: 237 LSILQSGMAE---------PDKESVLRAMRQGGKSAAQVLSHYGAFGFGKPF 279 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,858,454,721 Number of extensions: 76449162 Number of successful extensions: 175624 Number of sequences better than 1.0e-05: 338 Number of HSP's gapped: 175615 Number of HSP's successfully gapped: 338 Length of query: 307 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 172 Effective length of database: 1,788,859,178 Effective search space: 307683778616 Effective search space used: 307683778616 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)