BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0530.0010.p (274 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0CY07.1 C0CY07_9CLOT Putative uncharacterized protein 238 3e-61 C4C503.1 C4C503_9FUSO Methyltransferase family protein 231 5e-59 C0EFW4.1 C0EFW4_9CLOT Putative uncharacterized protein 229 1e-58 Q186W9.1 Q186W9_CLOD6 Putative uncharacterized protein 211 5e-53 C2YMU9.1 C2YMU9_BACCE Putative uncharacterized protein 206 2e-51 >C0CY07.1 C0CY07_9CLOT Putative uncharacterized protein Length = 275 Score = 238 bits (608), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 113/270 (41%), Positives = 177/270 (65%), Gaps = 8/270 (2%) Query: 8 LLQKPALWQRSHEPFWDDEHISKGMLEAHLNPDWDAASRKQSYINRSVKWLSGVIPANG- 66 +L+KP L+ ++ PFWDDEHIS ML+AHL+PD++ ASRK +I +SV+W+ ++PA Sbjct: 8 ILEKPPLYTKTEIPFWDDEHISGEMLKAHLDPDFEGASRKLPFIEKSVRWIGELVPAGDY 67 Query: 67 -KILDLGCGPGLYAKRLSGMWYDVTGVDFSKRSIAYA----KSQDAKTEYIYKNYLDIEY 121 +++D GCGPGLY +RL+ Y+VTGVD S+RSIAYA + + Y+ KNYL ++ Sbjct: 68 RRMIDFGCGPGLYGERLARTGYEVTGVDMSRRSIAYAERSAREKGLDIRYLQKNYLQMDL 127 Query: 122 TAMYNAVTLIYGDYAALTPDERKTLVEKVHKALKPGGLFILDVFTEKQFENKKSSTSWAL 181 ++ T+IY DY AL+ +R L+ V+ L+PGG F++DVFT ++E + + +W + Sbjct: 128 GETFDFATMIYCDYGALSTVDRAVLMNTVYNHLRPGGRFLMDVFTMVKYELFEETQTWEV 187 Query: 182 CTNGGFWSAEPHICLEATYLYENNTVAVNKYVIFGKDGLKEYLIWDTAYTVQKLTEEVSP 241 C NGGFWS +P+I + Y Y T+ + ++ G++ ++ Y IW+T ++ + LT E Sbjct: 188 CENGGFWSDQPYIEFDGRYKYPGVTLE-HAAIVSGQE-VRNYYIWNTYFSREGLTREAEA 245 Query: 242 FGFTVKGVFDDVCGSPYTGEADTLCFIMEK 271 GF V G+F DV G+PY G+ T+ ++EK Sbjct: 246 AGFHVCGLFGDVAGAPYGGDGQTMAVLLEK 275 >C4C503.1 C4C503_9FUSO Methyltransferase family protein Length = 277 Score = 231 bits (589), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 109/266 (40%), Positives = 175/266 (65%), Gaps = 7/266 (2%) Query: 7 HLLQKPALWQRSHEPFWDDEHISKGMLEAHLNPDWDAASRKQSYINRSVKWLSGVIPANG 66 +L ++PA ++ + FWDD HISKGML AHLN + ++A+RK +I +SV W+ + Sbjct: 8 YLEKRPAAYEVTGLKFWDDPHISKGMLAAHLNTELESATRKLDFIKKSVDWIKEITDGEN 67 Query: 67 --KILDLGCGPGLYAKRLSGMWYDVTGVDFSKRSIAYAKSQDAK----TEYIYKNYLDIE 120 K+LDLGCGPG+YA+ + +DVTG+D S RSI YAK K +Y K+YL++E Sbjct: 68 RKKLLDLGCGPGIYAELFAERGFDVTGIDISGRSIDYAKENTVKKRSNIKYYQKSYLEME 127 Query: 121 YTAMYNAVTLIYGDYAALTPDERKTLVEKVHKALKPGGLFILDVFTEKQFENKKSSTSWA 180 Y+ ++ +TLIY D+ L P+ER+ L++K++KALKPGG+ I DVF+EK+++ K+ +TSW+ Sbjct: 128 YSEEFDIITLIYCDFGVLNPEEREILLKKIYKALKPGGMLIFDVFSEKEYQMKEENTSWS 187 Query: 181 LCTNGGFWSAEPHICLEATYLYENNTVAVNKYVIFGKDGLKEYLIWDTAYTVQKLTEEVS 240 NGG+WS P++CL + Y V + +YVI ++ +K Y +W+ A++ ++L ++ Sbjct: 188 Y-NNGGYWSENPYVCLYSFNRYYEAAVFLEQYVILEEESVKCYNLWNKAFSAEELHRDLG 246 Query: 241 PFGFTVKGVFDDVCGSPYTGEADTLC 266 GF G +DD+ G +T ++ +C Sbjct: 247 EAGFHKCGFYDDISGKNFTENSNVIC 272 >C0EFW4.1 C0EFW4_9CLOT Putative uncharacterized protein Length = 276 Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 113/277 (40%), Positives = 172/277 (62%), Gaps = 7/277 (2%) Query: 1 MMDKWFHLLQKPALWQRSHEPFWDDEHISKGMLEAHLNPDWDAASRKQSYINRSVKWLSG 60 M+ + L +KP L+ ++ PFWDDEHIS ML AHLNP++D ASRK +I +SV W+S Sbjct: 1 MLTELTPLFKKPPLYTKTEIPFWDDEHISLQMLNAHLNPNYDGASRKLEFIEKSVDWISK 60 Query: 61 VIPANG--KILDLGCGPGLYAKRLSGMWYDVTGVDFSKRSIAYA----KSQDAKTEYIYK 114 ++P+ +LD+GCGPGLY +R + Y V GVDFS RSI YA K + +Y Y+ Sbjct: 61 ILPSEHYPSVLDIGCGPGLYTERYAKKGYRVVGVDFSHRSINYAQMSAKRKGLPIDYFYQ 120 Query: 115 NYLDIEYTAMYNAVTLIYGDYAALTPDERKTLVEKVHKALKPGGLFILDVFTEKQFENKK 174 +YL++ ++ T+IY D+ AL+ ++RK L++ +++ LKPGG F+LDVF+ Q EN + Sbjct: 121 DYLNLSLDKKFDFATMIYCDFGALSTNDRKQLLKIIYQHLKPGGRFLLDVFSLTQLENFQ 180 Query: 175 SSTSWALCTNGGFWSAEPHICLEATYLYENNTVAVNKYVIFGKDGLKEYLIWDTAYTVQK 234 S +W +C +GGFW E +I L Y +N V + + ++ K + Y +WDT ++ + Sbjct: 181 ESQTWEVCPDGGFWYPENYIALNRACKYPDN-VTLRQTLVIAKKKVSNYYLWDTYFSKKA 239 Query: 235 LTEEVSPFGFTVKGVFDDVCGSPYTGEADTLCFIMEK 271 L EE GF + F DV GS Y+ + TL +++K Sbjct: 240 LEEEAVGSGFKICEYFGDVSGSTYSEHSSTLAVLLKK 276 >Q186W9.1 Q186W9_CLOD6 Putative uncharacterized protein Length = 276 Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 108/277 (38%), Positives = 173/277 (62%), Gaps = 7/277 (2%) Query: 1 MMDKWFHLLQKPALWQRSHEPFWDDEHISKGMLEAHLNPDWDAASRKQSYINRSVKWLSG 60 M++K L++P L+++S FWDDE+ISK +L+AHL+ +++ ASR ++I SV W+ Sbjct: 1 MLNKLCMYLERPELYKQSEINFWDDEYISKQLLKAHLDTNFEGASRNFNFIEDSVNWIVT 60 Query: 61 VI-PAN-GKILDLGCGPGLYAKRLSGMWYDVTGVDFSKRSIAYAKSQDAKTE----YIYK 114 V PAN K+LDLGCGPGLYA++ + Y VTG+DFSKRSI YA++++ +T Y+++ Sbjct: 61 VANPANYPKLLDLGCGPGLYAEKFAQKGYKVTGIDFSKRSINYAQNRNKETNLNINYLFQ 120 Query: 115 NYLDIEYTAMYNAVTLIYGDYAALTPDERKTLVEKVHKALKPGGLFILDVFTEKQFENKK 174 +YL++ Y ++ TLIY DY AL+ + R+ L+EK++ +LKPGG ILDVFT ++ N + Sbjct: 121 SYLNMNYNEEFDLATLIYCDYGALSTENRRLLMEKIYDSLKPGGKLILDVFTINKYNNFE 180 Query: 175 SSTSWALCTNGGFWSAEPHICLEATYLYENNTVAVNKYVIFGKDGLKEYLIWDTAYTVQK 234 W + +GGFWS E ++CL+ Y + VI KD + +W+ ++ + Sbjct: 181 EIKYWEINEDGGFWSNEKYMCLQDNCKYNDYNTLEQTLVITEKDE-NVFYVWNHYFSKES 239 Query: 235 LTEEVSPFGFTVKGVFDDVCGSPYTGEADTLCFIMEK 271 EV GF F +V G Y+ ++ T+ +++K Sbjct: 240 FLLEVENIGFKSVEFFSNVKGEAYSDDSMTMGLVLQK 276 >C2YMU9.1 C2YMU9_BACCE Putative uncharacterized protein Length = 275 Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 103/276 (37%), Positives = 165/276 (59%), Gaps = 7/276 (2%) Query: 2 MDKWFHLLQKPALWQRSHEPFWDDEHISKGMLEAHLNPDWDAASRKQSYINRSVKWLSGV 61 M+ + LQ P+ ++++ FW D +I+K +LE HL+ D + ASR +I++S+ ++ + Sbjct: 1 MNNLLNQLQVPSRFEQTDNVFWQDPYIAKKLLEVHLSSDTEGASRSFQFIDKSIDFIQQI 60 Query: 62 IPANG--KILDLGCGPGLYAKRLSGMWYDVTGVDFSKRSIAYAKSQ----DAKTEYIYKN 115 P K+LDLGCGPGLY++RL+ Y VTG+DFS+ SI YAK Q D EY Y+N Sbjct: 61 APKKSYQKVLDLGCGPGLYSERLARKGYTVTGIDFSENSIRYAKEQVKKLDYNIEYRYEN 120 Query: 116 YLDIEYTAMYNAVTLIYGDYAALTPDERKTLVEKVHKALKPGGLFILDVFTEKQFENKKS 175 YL++ + MY+ LIY DY AL P+ R L+ + +LK GG +LDVF++ +F+ K Sbjct: 121 YLELNDSNMYDLALLIYCDYGALAPENRSKLLFNIWNSLKDGGKLLLDVFSQNKFDQFKE 180 Query: 176 STSWALCTNGGFWSAEPHICLEATYLYENNTVAVNKYVIFGKDGLKEYLIWDTAYTVQKL 235 W++ NGGFWS + ++ + Y + V + + + + ++ Y IW +T + Sbjct: 181 EQYWSMNENGGFWSKDCYLVIGRNLKYPDR-VTLEQTTVVTDEKIETYNIWYQFFTKELF 239 Query: 236 TEEVSPFGFTVKGVFDDVCGSPYTGEADTLCFIMEK 271 +EV+ GFTVK ++DDV G G + T+ ++EK Sbjct: 240 IKEVTAVGFTVKEIYDDVSGETGNGGSQTIALLLEK 275 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,817,950,428 Number of extensions: 77438400 Number of successful extensions: 188625 Number of sequences better than 1.0e-05: 251 Number of HSP's gapped: 189519 Number of HSP's successfully gapped: 251 Length of query: 274 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 140 Effective length of database: 1,798,280,193 Effective search space: 251759227020 Effective search space used: 251759227020 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)